RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W HXT2P23585 541 aa3.21□□□□□ -1.9
CPR8YNR028W BMH1P29311 267 aaKnown RBP3.21□□□□□ -1.9
CPR8YNR028W YPS1P32329 569 aa3.21□□□□□ -1.9
CPR8YNR028W VMA6P32366 345 aaKnown RBP3.21□□□□□ -1.9
CPR8YNR028W SPO23P33757 523 aa3.21□□□□□ -1.9
CPR8YNR028W MRPS9P38120 278 aa3.21□□□□□ -1.9
CPR8YNR028W TRM5P38793 499 aa3.21□□□□□ -1.9
CPR8YNR028W YHR122WP38829 231 aa3.21□□□□□ -1.9
CPR8YNR028W TDA11P38854 504 aa3.21□□□□□ -1.9
CPR8YNR028W ALP1P38971 573 aa3.21□□□□□ -1.9
CPR8YNR028W COX15P40086 486 aa3.21□□□□□ -1.9
CPR8YNR028W YMR134WP40207 237 aa3.21□□□□□ -1.9
CPR8YNR028W CIN5P40917 295 aa3.21□□□□□ -1.9
CPR8YNR028W IGD1P43598 195 aa3.21□□□□□ -1.9
CPR8YNR028W YAR1P46683 200 aa3.21□□□□□ -1.9
CPR8YNR028W COX16P47081 118 aa3.21□□□□□ -1.9
CPR8YNR028W DIA1P54005 336 aa3.21□□□□□ -1.9
CPR8YNR028W EBS1Q03466 884 aaKnown RBP3.21□□□□□ -1.9
CPR8YNR028W YET3Q07451 203 aa3.21□□□□□ -1.9
CPR8YNR028W RAD9P14737 1309 aa3.2□□□□□ -1.9
CPR8YNR028W TUS1Q06412 1307 aa3.2□□□□□ -1.9
CPR8YNR028W QCR2P07257 368 aa3.2□□□□□ -1.9
CPR8YNR028W MATALPHA2P0CY08 210 aa3.2□□□□□ -1.9
CPR8YNR028W HMLALPHA2P0CY09 210 aa3.2□□□□□ -1.9
CPR8YNR028W POL30P15873 258 aaKnown RBP3.2□□□□□ -1.9
CPR8YNR028W FAR1P21268 830 aa3.2□□□□□ -1.9
CPR8YNR028W RRT12P25381 491 aa3.2□□□□□ -1.9
CPR8YNR028W CSM1P25651 190 aa3.2□□□□□ -1.9
CPR8YNR028W CIN8P27895 1000 aa3.2□□□□□ -1.9
CPR8YNR028W CWP1P28319 239 aa3.2□□□□□ -1.9
CPR8YNR028W GCG1P32656 232 aaKnown RBP3.2□□□□□ -1.9
CPR8YNR028W NUF2P33895 451 aa3.2□□□□□ -1.9
CPR8YNR028W CPR5P35176 225 aa3.2□□□□□ -1.9
CPR8YNR028W SOP4P39543 234 aaPredicted RBP3.2□□□□□ -1.9
CPR8YNR028W THO1P40040 218 aaKnown RBP3.2□□□□□ -1.9
CPR8YNR028W IBA57P47158 497 aa3.2□□□□□ -1.9
CPR8YNR028W PGU1P47180 361 aa3.2□□□□□ -1.9
CPR8YNR028W YGL262WP53054 175 aa3.2□□□□□ -1.9
CPR8YNR028W GET1P53192 235 aa3.2□□□□□ -1.9
CPR8YNR028W NOP13P53883 403 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
CPR8YNR028W CTF19Q02732 369 aa3.2□□□□□ -1.9
CPR8YNR028W MYO5Q04439 1219 aaKnown RBP3.2□□□□□ -1.9
CPR8YNR028W COX20Q04935 205 aa3.2□□□□□ -1.9
CPR8YNR028W YPQ1Q12010 308 aa3.2□□□□□ -1.9
CPR8YNR028W PER33Q12144 273 aa3.2□□□□□ -1.9
CPR8YNR028W SIA1Q12212 622 aa3.2□□□□□ -1.9
CPR8YNR028W FOL3Q12676 427 aaPredicted RBP3.2□□□□□ -1.9
CPR8YNR028W COX2P00410 251 aa3.19□□□□□ -1.9
CPR8YNR028W CBP6P07253 162 aaPredicted RBP3.19□□□□□ -1.9
CPR8YNR028W RAD23P32628 398 aaKnown RBP3.19□□□□□ -1.9
CPR8YNR028W SSO1P32867 290 aa3.19□□□□□ -1.9
CPR8YNR028W PRP18P33411 251 aaPredicted RBP3.19□□□□□ -1.9
CPR8YNR028W PRS4P38063 326 aaPredicted RBP3.19□□□□□ -1.9
CPR8YNR028W IML3P38265 245 aa3.19□□□□□ -1.9
CPR8YNR028W LSM12P38828 187 aaKnown RBP3.19□□□□□ -1.9
CPR8YNR028W SOK1P40317 901 aa3.19□□□□□ -1.9
CPR8YNR028W TPS1Q00764 495 aaKnown RBP3.19□□□□□ -1.9
CPR8YNR028W YMR010WQ03687 405 aa3.19□□□□□ -1.9
CPR8YNR028W UBX2Q04228 584 aa3.19□□□□□ -1.9
CPR8YNR028W YDR222WQ04925 415 aa3.19□□□□□ -1.9
CPR8YNR028W YHC1Q05900 231 aaKnown RBP3.19□□□□□ -1.9
CPR8YNR028W SPO77Q06134 477 aa3.19□□□□□ -1.9
CPR8YNR028W BER1Q06688 274 aaKnown RBP3.19□□□□□ -1.9
CPR8YNR028W GPM2Q12008 311 aa3.19□□□□□ -1.9
CPR8YNR028W HMS1Q12398 434 aa3.19□□□□□ -1.9
CPR8YNR028W UBA3Q99344 299 aa3.19□□□□□ -1.9
CPR8YNR028W FAB1P34756 2278 aa3.19□□□□□ -1.9
CPR8YNR028W ADH1P00330 348 aaKnown RBP3.18□□□□□ -1.9
CPR8YNR028W STE7P06784 515 aa3.18□□□□□ -1.9
CPR8YNR028W CDC33P07260 213 aaKnown RBP3.18□□□□□ -1.9
CPR8YNR028W YBR121C-AP0C5L4 52 aa3.18□□□□□ -1.9
CPR8YNR028W RPS18AP0CX55 146 aaKnown RBP3.18□□□□□ -1.9
CPR8YNR028W RPS18BP0CX56 146 aaPredicted RBP3.18□□□□□ -1.9
CPR8YNR028W RPL35AP0CX84 120 aaKnown RBP3.18□□□□□ -1.9
CPR8YNR028W RPL35BP0CX85 120 aaKnown RBP3.18□□□□□ -1.9
CPR8YNR028W MAS2P11914 482 aa3.18□□□□□ -1.9
CPR8YNR028W FRS2P15625 503 aaKnown RBP3.18□□□□□ -1.9
CPR8YNR028W CBF1P17106 351 aa3.18□□□□□ -1.9
CPR8YNR028W MET16P18408 261 aaPredicted RBP3.18□□□□□ -1.9
CPR8YNR028W GPI12P23797 304 aa3.18□□□□□ -1.9
CPR8YNR028W GIT1P25346 518 aa3.18□□□□□ -1.9
CPR8YNR028W IDH1P28834 360 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
CPR8YNR028W ERG9P29704 444 aa3.18□□□□□ -1.9
CPR8YNR028W VMA5P31412 392 aaKnown RBP3.18□□□□□ -1.9
CPR8YNR028W VPH2P32341 215 aa3.18□□□□□ -1.9
CPR8YNR028W IMP3P32899 183 aaPredicted RBP3.18□□□□□ -1.9
CPR8YNR028W DRE2P36152 348 aa3.18□□□□□ -1.9
CPR8YNR028W FIG1P38224 298 aa3.18□□□□□ -1.9
CPR8YNR028W HIS2P38635 335 aa3.18□□□□□ -1.9
CPR8YNR028W YHR177WP38867 453 aa3.18□□□□□ -1.9
CPR8YNR028W YJR030CP47101 745 aa3.18□□□□□ -1.9
CPR8YNR028W BIO3P50277 480 aa3.18□□□□□ -1.9
CPR8YNR028W YGL159WP53110 370 aa3.18□□□□□ -1.9
CPR8YNR028W YGR018CP53211 109 aa3.18□□□□□ -1.9
CPR8YNR028W YGR042WP53227 271 aa3.18□□□□□ -1.9
CPR8YNR028W ALG11P53954 548 aaKnown RBP3.18□□□□□ -1.9
CPR8YNR028W RVB1Q03940 463 aaKnown RBP3.18□□□□□ -1.9
CPR8YNR028W BUR2Q05949 395 aa3.18□□□□□ -1.9
CPR8YNR028W MCH1Q07376 486 aa3.18□□□□□ -1.9
CPR8YNR028W PRP46Q12417 451 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms