RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	PUP2	P32379	260 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	NUP2	P32499	720 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	YEL043W	P32618	956 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	RPT5	P33297	434 aa	Known RBP	4.96	□□□□□ -1.62
CSL4	YNL232W	ECM34	P38728	170 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	GET2	P40056	285 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	COG3	P40094	801 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	MDE1	P47095	244 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	LIA1	P47120	325 aa	Known RBP	4.96	□□□□□ -1.62
CSL4	YNL232W	CTL1	Q03220	320 aa	Known RBP	4.96	□□□□□ -1.62
CSL4	YNL232W	RIM9	Q04734	239 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	ADH6	Q04894	360 aa	Known RBP	4.96	□□□□□ -1.62
CSL4	YNL232W	MDM36	Q06820	579 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	VHS3	Q08438	674 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	UAF30	Q08747	228 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	SNF8	Q12483	233 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	MHF1	Q3E835	90 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	MRP13	P12686	339 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	MSI1	P13712	422 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	RAD14	P28519	371 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	VMA11	P32842	164 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	MNS1	P32906	549 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	MDL1	P33310	695 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	PIG2	P40187	538 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	PFK26	P40433	827 aa	Known RBP	4.95	□□□□□ -1.62
CSL4	YNL232W	QRI7	P43122	407 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	ARC1	P46672	376 aa	Known RBP	4.95	□□□□□ -1.62
CSL4	YNL232W	URB2	P47108	1174 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	IMA1	P53051	589 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	MTM1	P53320	366 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	EAF7	P53911	425 aa	Known RBP	4.95	□□□□□ -1.62
CSL4	YNL232W	MCM21	Q06675	368 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	SNA4	Q07549	140 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	YOL131W	Q08270	108 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	YKL018C-A	Q3E7A7	99 aa		4.95	□□□□□ -1.62
CSL4	YNL232W	RPS5	P26783	225 aa	Known RBP	4.94	□□□□□ -1.62
CSL4	YNL232W	ICS2	P38284	255 aa		4.94	□□□□□ -1.62
CSL4	YNL232W	YER121W	P40076	114 aa		4.94	□□□□□ -1.62
CSL4	YNL232W	HXT9	P40885	567 aa		4.94	□□□□□ -1.62
CSL4	YNL232W	POP1	P41812	875 aa		4.94	□□□□□ -1.62
CSL4	YNL232W	COS6	P53344	381 aa		4.94	□□□□□ -1.62
CSL4	YNL232W	HXT11	P54862	567 aa		4.94	□□□□□ -1.62
CSL4	YNL232W	FMN1	Q03778	218 aa		4.94	□□□□□ -1.62
CSL4	YNL232W	DPB4	Q04603	196 aa	Known RBP	4.94	□□□□□ -1.62
CSL4	YNL232W	YHC1	Q05900	231 aa	Known RBP	4.94	□□□□□ -1.62
CSL4	YNL232W	UTP21	Q06078	939 aa	Predicted RBP	4.94	□□□□□ -1.62
CSL4	YNL232W	CSI2	Q08054	341 aa		4.94	□□□□□ -1.62
CSL4	YNL232W	YDL109C	Q12103	647 aa		4.94	□□□□□ -1.62
CSL4	YNL232W	APC2	Q12440	853 aa		4.94	□□□□□ -1.62
CSL4	YNL232W	UGA1	P17649	471 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	RPO26	P20435	155 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	PPQ1	P32945	549 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	TEF4	P36008	412 aa	Known RBP	4.93	□□□□□ -1.62
CSL4	YNL232W	FRE2	P36033	711 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	YBL029W	P38201	376 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	RRP4	P38792	359 aa	Known RBP	4.93	□□□□□ -1.62
CSL4	YNL232W	GAB1	P41733	394 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	BNA2	P47125	453 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	TOS2	P50078	622 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	YIP4	P53093	235 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	MAL13	P53338	473 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	SNF12	P53628	566 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	GIM3	P53900	129 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	YNL010W	P53981	241 aa	Known RBP	4.93	□□□□□ -1.62
CSL4	YNL232W	REX2	P54964	269 aa	Known RBP	4.93	□□□□□ -1.62
CSL4	YNL232W	SCS7	Q03529	384 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	YMR010W	Q03687	405 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	TVP15	Q03860	143 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	PHO92	Q06390	306 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	IRC19	Q07843	230 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	GAT3	Q07928	141 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	YEH2	Q07950	538 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	BRX1	Q08235	291 aa	Known RBP	4.93	□□□□□ -1.62
CSL4	YNL232W	BTS1	Q12051	335 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	FRE8	Q12209	686 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	YOR214C	Q12282	236 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	SPE4	Q12455	300 aa		4.93	□□□□□ -1.62
CSL4	YNL232W	RAP1	P11938	827 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	ERD2	P18414	219 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	EXG1	P23776	448 aa	Known RBP	4.92	□□□□□ -1.62
CSL4	YNL232W	VPS17	P32913	551 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	HCS1	P34243	683 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	PTC1	P35182	281 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	GDI1	P39958	451 aa	Known RBP	4.92	□□□□□ -1.62
CSL4	YNL232W	YNL195C	P40168	261 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	LAS21	P40367	830 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	GZF3	P42944	551 aa	Known RBP	4.92	□□□□□ -1.62
CSL4	YNL232W	YJL055W	P47044	245 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	SHE4	P51534	789 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	MGR3	Q04472	501 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	SGT1	Q08446	395 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	DCI1	Q08558	271 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	NIP7	Q08962	181 aa	Known RBP	4.92	□□□□□ -1.62
CSL4	YNL232W	NFI1	Q12216	726 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	ADF1	Q2V2Q1	113 aa		4.92	□□□□□ -1.62
CSL4	YNL232W	DEP1	P31385	405 aa		4.91	□□□□□ -1.62
CSL4	YNL232W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
CSL4	YNL232W	PRP19	P32523	503 aa	Known RBP	4.91	□□□□□ -1.62
CSL4	YNL232W	LIN1	P38852	340 aa	Predicted RBP	4.91	□□□□□ -1.62
CSL4	YNL232W	GLR1	P41921	483 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms