RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C RTN1Q04947 295 aaKnown RBP2.8□□□□□ -1.96
ATG27YJL178C SPC2Q04969 178 aa2.8□□□□□ -1.96
ATG27YJL178C IRC25Q07951 179 aa2.8□□□□□ -1.96
ATG27YJL178C YOL019WQ08157 551 aa2.8□□□□□ -1.96
ATG27YJL178C PST1Q12355 444 aa2.8□□□□□ -1.96
ATG27YJL178C JLP1Q12358 412 aa2.8□□□□□ -1.96
ATG27YJL178C AHC1Q12433 566 aa2.8□□□□□ -1.96
ATG27YJL178C SOD1P00445 154 aaKnown RBP2.79□□□□□ -1.96
ATG27YJL178C RHO1P06780 209 aaKnown RBP2.79□□□□□ -1.96
ATG27YJL178C CDC21P06785 304 aa2.79□□□□□ -1.96
ATG27YJL178C SPT3P06844 337 aa2.79□□□□□ -1.96
ATG27YJL178C COS2P0CX12 379 aa2.79□□□□□ -1.96
ATG27YJL178C COS3P0CX13 379 aa2.79□□□□□ -1.96
ATG27YJL178C SNF4P12904 322 aa2.79□□□□□ -1.96
ATG27YJL178C DAL81P21657 970 aa2.79□□□□□ -1.96
ATG27YJL178C SGE1P33335 543 aa2.79□□□□□ -1.96
ATG27YJL178C SKG1P36169 355 aa2.79□□□□□ -1.96
ATG27YJL178C MRPL17P36528 281 aa2.79□□□□□ -1.96
ATG27YJL178C MRPL40P36534 297 aa2.79□□□□□ -1.96
ATG27YJL178C IST2P38250 946 aa2.79□□□□□ -1.96
ATG27YJL178C YHR045WP38775 560 aa2.79□□□□□ -1.96
ATG27YJL178C SBE22P38814 852 aa2.79□□□□□ -1.96
ATG27YJL178C TDA11P38854 504 aa2.79□□□□□ -1.96
ATG27YJL178C GAT2P40209 560 aa2.79□□□□□ -1.96
ATG27YJL178C SIM1P40472 476 aa2.79□□□□□ -1.96
ATG27YJL178C YPS6P40583 537 aa2.79□□□□□ -1.96
ATG27YJL178C COS4P43542 379 aa2.79□□□□□ -1.96
ATG27YJL178C GET1P53192 235 aa2.79□□□□□ -1.96
ATG27YJL178C EFM5P53200 248 aaKnown RBP2.79□□□□□ -1.96
ATG27YJL178C YNL143CP53908 130 aa2.79□□□□□ -1.96
ATG27YJL178C SPO19Q03029 223 aa2.79□□□□□ -1.96
ATG27YJL178C YMR099CQ03161 297 aaKnown RBP2.79□□□□□ -1.96
ATG27YJL178C YHC1Q05900 231 aaKnown RBP2.79□□□□□ -1.96
ATG27YJL178C UAF30Q08747 228 aa2.79□□□□□ -1.96
ATG27YJL178C AEP3Q12089 606 aa2.79□□□□□ -1.96
ATG27YJL178C PER33Q12144 273 aa2.79□□□□□ -1.96
ATG27YJL178C TIM9O74700 87 aa2.78□□□□□ -1.96
ATG27YJL178C RPB4P20433 221 aaPredicted RBP2.78□□□□□ -1.96
ATG27YJL178C MRPS28P21771 286 aa2.78□□□□□ -1.96
ATG27YJL178C PEX34P25584 144 aa2.78□□□□□ -1.96
ATG27YJL178C PHO91P27514 894 aa2.78□□□□□ -1.96
ATG27YJL178C CAF4P36130 643 aa2.78□□□□□ -1.96
ATG27YJL178C SOL2P37262 315 aa2.78□□□□□ -1.96
ATG27YJL178C CHK1P38147 527 aa2.78□□□□□ -1.96
ATG27YJL178C CYC2P38909 366 aa2.78□□□□□ -1.96
ATG27YJL178C MTW1P39731 289 aa2.78□□□□□ -1.96
ATG27YJL178C HEM14P40012 539 aa2.78□□□□□ -1.96
ATG27YJL178C PDS1P40316 373 aaPredicted RBP2.78□□□□□ -1.96
ATG27YJL178C SNL1P40548 159 aa2.78□□□□□ -1.96
ATG27YJL178C GCD14P46959 383 aaPredicted RBP2.78□□□□□ -1.96
ATG27YJL178C YJR085CP47131 105 aaKnown RBP2.78□□□□□ -1.96
ATG27YJL178C RMR1P53060 241 aa2.78□□□□□ -1.96
ATG27YJL178C PRP38Q00723 242 aaPredicted RBP2.78□□□□□ -1.96
ATG27YJL178C SPR6Q01684 191 aa2.78□□□□□ -1.96
ATG27YJL178C NUP116Q02630 1113 aa2.78□□□□□ -1.96
ATG27YJL178C STD1Q02794 444 aa2.78□□□□□ -1.96
ATG27YJL178C PRP3Q03338 469 aaPredicted RBP2.78□□□□□ -1.96
ATG27YJL178C CCE1Q03702 353 aa2.78□□□□□ -1.96
ATG27YJL178C SMP3Q04174 516 aa2.78□□□□□ -1.96
ATG27YJL178C EMI1Q04406 187 aa2.78□□□□□ -1.96
ATG27YJL178C YDR124WQ04608 324 aa2.78□□□□□ -1.96
ATG27YJL178C YLR456WQ06199 204 aa2.78□□□□□ -1.96
ATG27YJL178C RRP9Q06506 573 aaKnown RBP2.78□□□□□ -1.96
ATG27YJL178C YLR413WQ06689 675 aa2.78□□□□□ -1.96
ATG27YJL178C SMF3Q12078 473 aaPredicted RBP2.78□□□□□ -1.96
ATG27YJL178C MED2Q12124 431 aa2.78□□□□□ -1.96
ATG27YJL178C MHT1Q12525 324 aa2.78□□□□□ -1.96
ATG27YJL178C SAS5Q99314 248 aa2.78□□□□□ -1.96
ATG27YJL178C MSS116P15424 664 aaKnown RBP2.77□□□□□ -1.97
ATG27YJL178C CSM1P25651 190 aa2.77□□□□□ -1.97
ATG27YJL178C NTG1P31378 399 aa2.77□□□□□ -1.97
ATG27YJL178C CYS4P32582 507 aaKnown RBP2.77□□□□□ -1.97
ATG27YJL178C PRP18P33411 251 aaPredicted RBP2.77□□□□□ -1.97
ATG27YJL178C RPS1AP33442 255 aaKnown RBP2.77□□□□□ -1.97
ATG27YJL178C MAK5P38112 773 aaPredicted RBP2.77□□□□□ -1.97
ATG27YJL178C YBR285WP38354 144 aa2.77□□□□□ -1.97
ATG27YJL178C RGI1P40043 161 aaPredicted RBP2.77□□□□□ -1.97
ATG27YJL178C UTP18P40362 594 aaPredicted RBP2.77□□□□□ -1.97
ATG27YJL178C YRB2P40517 327 aa2.77□□□□□ -1.97
ATG27YJL178C ERG10P41338 398 aaKnown RBP2.77□□□□□ -1.97
ATG27YJL178C GLG2P47011 380 aa2.77□□□□□ -1.97
ATG27YJL178C AIM23P47015 356 aa2.77□□□□□ -1.97
ATG27YJL178C PRM1P53835 661 aa2.77□□□□□ -1.97
ATG27YJL178C MET31Q03081 177 aa2.77□□□□□ -1.97
ATG27YJL178C NHP10Q03435 203 aa2.77□□□□□ -1.97
ATG27YJL178C YMR010WQ03687 405 aa2.77□□□□□ -1.97
ATG27YJL178C YPR114WQ06107 315 aa2.77□□□□□ -1.97
ATG27YJL178C GMC2Q06201 188 aa2.77□□□□□ -1.97
ATG27YJL178C GGA1Q06336 557 aa2.77□□□□□ -1.97
ATG27YJL178C GPI11Q06636 219 aa2.77□□□□□ -1.97
ATG27YJL178C DTD1Q07648 150 aaKnown RBP2.77□□□□□ -1.97
ATG27YJL178C NSE1Q07913 336 aa2.77□□□□□ -1.97
ATG27YJL178C YOL131WQ08270 108 aa2.77□□□□□ -1.97
ATG27YJL178C GET4Q12125 312 aa2.77□□□□□ -1.97
ATG27YJL178C NSL1Q12143 216 aa2.77□□□□□ -1.97
ATG27YJL178C YPL245WQ12179 454 aaKnown RBP2.77□□□□□ -1.97
ATG27YJL178C TPT1Q12272 230 aaKnown RBP2.77□□□□□ -1.97
ATG27YJL178C PSY3Q12318 242 aa2.77□□□□□ -1.97
ATG27YJL178C SNF8Q12483 233 aa2.77□□□□□ -1.97
ATG27YJL178C CCH1P50077 2039 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms