RNA–Protein interactions for RNA: YNL323W

LEM3, Transcript of Membrane protein of the plasma membrane and ER, yeast

Gene LEM3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEM3	YNL323W	SHM2	P37291	469 aa	Known RBP	4.86	□□□□□ -1.63
LEM3	YNL323W	EHT1	P38295	451 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	MNL1	P38888	796 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	LYS1	P38998	373 aa	RIP-Chip data	4.86	□□□□□ -1.63	not detected
LEM3	YNL323W	PRP39	P39682	629 aa	Known RBP	4.86	□□□□□ -1.63
LEM3	YNL323W	RTT105	P40063	208 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	LRO1	P40345	661 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	YIL108W	P40483	696 aa	Known RBP	4.86	□□□□□ -1.63
LEM3	YNL323W	CIN1	P40987	1014 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	FET5	P43561	622 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	ATG18	P43601	500 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	FAA4	P47912	694 aa	Known RBP	4.86	□□□□□ -1.63
LEM3	YNL323W	TOS2	P50078	622 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	YDR541C	Q03049	344 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	SEC13	Q04491	297 aa	Known RBP	4.86	□□□□□ -1.63
LEM3	YNL323W	YMR315W	Q04869	349 aa	Known RBP	4.86	□□□□□ -1.63
LEM3	YNL323W	PHO92	Q06390	306 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	IPK1	Q06667	281 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
LEM3	YNL323W	LEU9	Q12166	604 aa	Known RBP	4.86	□□□□□ -1.63
LEM3	YNL323W	YOR214C	Q12282	236 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	YDR061W	Q12298	539 aa		4.86	□□□□□ -1.63
LEM3	YNL323W	SEN2	P16658	377 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	PRP2	P20095	876 aa	Predicted RBP	4.85	□□□□□ -1.63
LEM3	YNL323W	SAR1	P20606	190 aa	Known RBP	4.85	□□□□□ -1.63
LEM3	YNL323W	PRP28	P23394	588 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	PTP1	P25044	335 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	HOM6	P31116	359 aa	Known RBP	4.85	□□□□□ -1.63
LEM3	YNL323W	FUN26	P31381	517 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	CDC12	P32468	407 aa	Known RBP	4.85	□□□□□ -1.63
LEM3	YNL323W	PPQ1	P32945	549 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	SKN1	P33336	771 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	YBR137W	P38276	179 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	RTC2	P38279	296 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	BAT1	P38891	393 aa	Known RBP	4.85	□□□□□ -1.63
LEM3	YNL323W	ELO1	P39540	310 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	SER3	P40054	469 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	ICE2	P40499	491 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	MDE1	P47095	244 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	YGL235W	P53071	178 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	TYW3	P53177	273 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	PGA1	P53896	198 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	MRPL13	Q02204	264 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	NUP116	Q02630	1113 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	EGD1	Q02642	157 aa	Known RBP	4.85	□□□□□ -1.63
LEM3	YNL323W	MSS11	Q03825	758 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	SPC19	Q03954	165 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	SMA2	Q04658	369 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	BUR2	Q05949	395 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	YPR172W	Q06608	200 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	MRPL35	Q06678	367 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	YPR091C	Q06833	770 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	BAG7	Q12128	409 aa		4.85	□□□□□ -1.63
LEM3	YNL323W	DET1	Q99288	334 aa	Known RBP	4.85	□□□□□ -1.63
LEM3	YNL323W	QCR7	P00128	127 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	YGL041W-A	P0C5N3	154 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	PET54	P10834	293 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	HMG1	P12683	1054 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	RPA135	P22138	1203 aa	Known RBP	4.84	□□□□□ -1.63
LEM3	YNL323W	EXG1	P23776	448 aa	Known RBP	4.84	□□□□□ -1.63
LEM3	YNL323W	YEF1	P32622	495 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	ECT1	P33412	323 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
LEM3	YNL323W	AUR1	P36107	401 aa	Predicted RBP	4.84	□□□□□ -1.63
LEM3	YNL323W	YBR242W	P38331	238 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	ECM34	P38728	170 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	WSC4	P38739	605 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	TRR2	P38816	342 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	FMO1	P38866	432 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	PFS1	P38872	237 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	VMA7	P39111	118 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	YNL195C	P40168	261 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	TIF34	P40217	347 aa	Known RBP	4.84	□□□□□ -1.63
LEM3	YNL323W	MNN5	P46982	586 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	YGR266W	P53326	701 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	ERV29	P53337	310 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	PAU12	P53343	120 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	LSM7	P53905	115 aa	Known RBP	4.84	□□□□□ -1.63
LEM3	YNL323W	MRPS16	Q02608	121 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	RSM28	Q03430	361 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	AIM36	Q03798	255 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	SNT309	Q06091	175 aa	Predicted RBP	4.84	□□□□□ -1.63
LEM3	YNL323W	TPO3	Q06451	622 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	ARV1	Q06541	321 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	YFT2	Q06676	274 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	BRX1	Q08235	291 aa	Known RBP	4.84	□□□□□ -1.63
LEM3	YNL323W	YOR365C	Q08844	703 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	YOR283W	Q12040	230 aa	Known RBP	4.84	□□□□□ -1.63
LEM3	YNL323W	FRE6	Q12473	712 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	YDR034W-B	Q6Q5X2	51 aa		4.84	□□□□□ -1.63
LEM3	YNL323W	MEX67	Q99257	599 aa	Known RBP	4.84	□□□□□ -1.63
LEM3	YNL323W	CCH1	P50077	2039 aa		4.84	□□□□□ -1.64
LEM3	YNL323W	CAN1	P04817	590 aa		4.83	□□□□□ -1.64
LEM3	YNL323W	HIS3	P06633	220 aa		4.83	□□□□□ -1.64
LEM3	YNL323W	STE12	P13574	688 aa		4.83	□□□□□ -1.64
LEM3	YNL323W	HOP1	P20050	605 aa		4.83	□□□□□ -1.64
LEM3	YNL323W	DBP2	P24783	546 aa	Known RBP	4.83	□□□□□ -1.64
LEM3	YNL323W	ATG22	P25568	528 aa		4.83	□□□□□ -1.64
LEM3	YNL323W	SNC1	P31109	117 aa		4.83	□□□□□ -1.64
LEM3	YNL323W	HYM1	P32464	399 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms