RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W MUM3Q08750 479 aa3.9□□□□□ -1.79
SOF1YLL011W DAP1Q12091 152 aa3.9□□□□□ -1.79
SOF1YLL011W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
SOF1YLL011W YLR108CQ12259 485 aa3.9□□□□□ -1.79
SOF1YLL011W THP2O13539 261 aaKnown RBP3.89□□□□□ -1.79
SOF1YLL011W REV1P12689 985 aa3.89□□□□□ -1.79
SOF1YLL011W SLY1P22213 666 aa3.89□□□□□ -1.79
SOF1YLL011W GLC7P32598 312 aaKnown RBP3.89□□□□□ -1.79
SOF1YLL011W IES6P32617 166 aa3.89□□□□□ -1.79
SOF1YLL011W PRP18P33411 251 aaPredicted RBP3.89□□□□□ -1.79
SOF1YLL011W RIB1P38066 345 aa3.89□□□□□ -1.79
SOF1YLL011W CHK1P38147 527 aa3.89□□□□□ -1.79
SOF1YLL011W MIC12P38341 106 aa3.89□□□□□ -1.79
SOF1YLL011W TDA11P38854 504 aa3.89□□□□□ -1.79
SOF1YLL011W YHB1P39676 399 aaKnown RBP3.89□□□□□ -1.79
SOF1YLL011W YFL040WP43562 540 aa3.89□□□□□ -1.79
SOF1YLL011W GUF1P46943 645 aa3.89□□□□□ -1.79
SOF1YLL011W SFH5P47008 294 aa3.89□□□□□ -1.79
SOF1YLL011W AVT1P47082 602 aa3.89□□□□□ -1.79
SOF1YLL011W REX2P54964 269 aaKnown RBP3.89□□□□□ -1.79
SOF1YLL011W ECI1Q05871 280 aa3.89□□□□□ -1.79
SOF1YLL011W HIS1P00498 297 aaKnown RBP3.88□□□□□ -1.79
SOF1YLL011W ILV1P00927 576 aaKnown RBP3.88□□□□□ -1.79
SOF1YLL011W RPL42AP0CX27 106 aaKnown RBP3.88□□□□□ -1.79
SOF1YLL011W RPL42BP0CX28 106 aaKnown RBP3.88□□□□□ -1.79
SOF1YLL011W MATALPHA2P0CY08 210 aa3.88□□□□□ -1.79
SOF1YLL011W HMLALPHA2P0CY09 210 aa3.88□□□□□ -1.79
SOF1YLL011W CBT1P36038 271 aaPredicted RBP3.88□□□□□ -1.79
SOF1YLL011W SCO2P38072 301 aa3.88□□□□□ -1.79
SOF1YLL011W RTC3P38804 111 aaPredicted RBP3.88□□□□□ -1.79
SOF1YLL011W FLO5P38894 1075 aa3.88□□□□□ -1.79
SOF1YLL011W MST28P39552 234 aa3.88□□□□□ -1.79
SOF1YLL011W RMR1P53060 241 aa3.88□□□□□ -1.79
SOF1YLL011W EFM5P53200 248 aaKnown RBP3.88□□□□□ -1.79
SOF1YLL011W COS1P53822 381 aa3.88□□□□□ -1.79
SOF1YLL011W RSC9Q03124 581 aa3.88□□□□□ -1.79
SOF1YLL011W BCH1Q05029 724 aa3.88□□□□□ -1.79
SOF1YLL011W DCR2Q05924 578 aa3.88□□□□□ -1.79
SOF1YLL011W SPO77Q06134 477 aa3.88□□□□□ -1.79
SOF1YLL011W YRA1Q12159 226 aaKnown RBP3.88□□□□□ -1.79
SOF1YLL011W GLT1Q12680 2145 aaKnown RBP3.87□□□□□ -1.79
SOF1YLL011W TCP1P12612 559 aaKnown RBP3.87□□□□□ -1.79
SOF1YLL011W VMA6P32366 345 aaKnown RBP3.87□□□□□ -1.79
SOF1YLL011W ATO2P32907 282 aa3.87□□□□□ -1.79
SOF1YLL011W SIP2P34164 415 aaKnown RBP3.87□□□□□ -1.79
SOF1YLL011W AZF1P41696 914 aa3.87□□□□□ -1.79
SOF1YLL011W SAD1P43589 448 aa3.87□□□□□ -1.79
SOF1YLL011W RRT5P43607 289 aa3.87□□□□□ -1.79
SOF1YLL011W NBP1P52919 319 aaPredicted RBP3.87□□□□□ -1.79
SOF1YLL011W LIF1P53150 421 aa3.87□□□□□ -1.79
SOF1YLL011W CPD1P53314 239 aa3.87□□□□□ -1.79
SOF1YLL011W IDP3P53982 420 aaKnown RBP3.87□□□□□ -1.79
SOF1YLL011W NUP116Q02630 1113 aa3.87□□□□□ -1.79
SOF1YLL011W YPL077CQ02831 240 aa3.87□□□□□ -1.79
SOF1YLL011W VBA1Q04301 562 aa3.87□□□□□ -1.79
SOF1YLL011W SNF8Q12483 233 aa3.87□□□□□ -1.79
SOF1YLL011W CBF1P17106 351 aa3.86□□□□□ -1.79
SOF1YLL011W STE18P18852 110 aa3.86□□□□□ -1.79
SOF1YLL011W YCR022CP25620 114 aa3.86□□□□□ -1.79
SOF1YLL011W NUP2P32499 720 aa3.86□□□□□ -1.79
SOF1YLL011W KAR9P32526 644 aa3.86□□□□□ -1.79
SOF1YLL011W MRPL6P32904 214 aa3.86□□□□□ -1.79
SOF1YLL011W OAR1P35731 278 aa3.86□□□□□ -1.79
SOF1YLL011W MRPL10P36520 322 aa3.86□□□□□ -1.79
SOF1YLL011W RRP3P38712 501 aaKnown RBP3.86□□□□□ -1.79
SOF1YLL011W YHR035WP38769 630 aa3.86□□□□□ -1.79
SOF1YLL011W HAT2P39984 401 aa3.86□□□□□ -1.79
SOF1YLL011W PCL6P40038 420 aa3.86□□□□□ -1.79
SOF1YLL011W YIL169CP40442 995 aa3.86□□□□□ -1.79
SOF1YLL011W YIR016WP40572 265 aa3.86□□□□□ -1.79
SOF1YLL011W TES1P41903 349 aaKnown RBP3.86□□□□□ -1.79
SOF1YLL011W WWM1P43582 211 aaKnown RBP3.86□□□□□ -1.79
SOF1YLL011W TIS11P47977 285 aa3.86□□□□□ -1.79
SOF1YLL011W LSG1P53145 640 aaKnown RBP3.86□□□□□ -1.79
SOF1YLL011W YDR415CQ04033 374 aaPredicted RBP3.86□□□□□ -1.79
SOF1YLL011W KRE28Q04431 385 aa3.86□□□□□ -1.79
SOF1YLL011W YMR226CQ05016 267 aaKnown RBP3.86□□□□□ -1.79
SOF1YLL011W ORM2Q06144 216 aa3.86□□□□□ -1.79
SOF1YLL011W YPL199CQ08954 240 aa3.86□□□□□ -1.79
SOF1YLL011W RGT2Q12300 763 aa3.86□□□□□ -1.79
SOF1YLL011W RIM15P43565 1770 aa3.86□□□□□ -1.79
SOF1YLL011W RPL31AP0C2H8 113 aaKnown RBP3.86□□□□□ -1.79
SOF1YLL011W RPO26P20435 155 aa3.86□□□□□ -1.79
SOF1YLL011W MUD1P32605 298 aaKnown RBP3.86□□□□□ -1.79
SOF1YLL011W PTR2P32901 601 aa3.86□□□□□ -1.79
SOF1YLL011W YKL063CP35725 167 aa3.86□□□□□ -1.79
SOF1YLL011W RCK2P38623 610 aa3.86□□□□□ -1.79
SOF1YLL011W SHC1P39000 512 aa3.86□□□□□ -1.79
SOF1YLL011W ERG28P40030 148 aa3.86□□□□□ -1.79
SOF1YLL011W DDI1P40087 428 aa3.86□□□□□ -1.79
SOF1YLL011W YIL024CP40543 189 aa3.86□□□□□ -1.79
SOF1YLL011W YIA6P40556 373 aa3.86□□□□□ -1.79
SOF1YLL011W SNO3P43544 222 aa3.86□□□□□ -1.79
SOF1YLL011W CTK3P46963 296 aaPredicted RBP3.86□□□□□ -1.79
SOF1YLL011W TAD2P47058 250 aa3.86□□□□□ -1.79
SOF1YLL011W ZRG17P53735 605 aa3.86□□□□□ -1.79
SOF1YLL011W CDC14Q00684 551 aa3.86□□□□□ -1.79
SOF1YLL011W PIR3Q03180 325 aa3.86□□□□□ -1.79
SOF1YLL011W RTT103Q05543 409 aa3.86□□□□□ -1.79
SOF1YLL011W YEH2Q07950 538 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms