RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C COX14P39103 70 aa3.48□□□□□ -1.85
SDS3YIL084C LSM4P40070 187 aaKnown RBP3.48□□□□□ -1.85
SDS3YIL084C SEC28P40509 296 aaKnown RBP3.48□□□□□ -1.85
SDS3YIL084C ROG1P53118 685 aa3.48□□□□□ -1.85
SDS3YIL084C MTQ1P53944 314 aa3.48□□□□□ -1.85
SDS3YIL084C NUP116Q02630 1113 aa3.48□□□□□ -1.85
SDS3YIL084C YDR541CQ03049 344 aa3.48□□□□□ -1.85
SDS3YIL084C PAL1Q05518 499 aaKnown RBP3.48□□□□□ -1.85
SDS3YIL084C NDL1Q06568 189 aa3.48□□□□□ -1.85
SDS3YIL084C MRPL35Q06678 367 aa3.48□□□□□ -1.85
SDS3YIL084C RRG7Q08774 242 aaPredicted RBP3.48□□□□□ -1.85
SDS3YIL084C SMF3Q12078 473 aaPredicted RBP3.48□□□□□ -1.85
SDS3YIL084C YRA1Q12159 226 aaKnown RBP3.48□□□□□ -1.85
SDS3YIL084C YOR338WQ99326 363 aa3.48□□□□□ -1.85
SDS3YIL084C RPS8AP0CX39 200 aaKnown RBP3.47□□□□□ -1.85
SDS3YIL084C RPS8BP0CX40 200 aaKnown RBP3.47□□□□□ -1.85
SDS3YIL084C NAM2P11325 894 aa3.47□□□□□ -1.85
SDS3YIL084C TRX1P22217 103 aaKnown RBP3.47□□□□□ -1.85
SDS3YIL084C AAT2P23542 418 aaKnown RBP3.47□□□□□ -1.85
SDS3YIL084C SLM5P25345 492 aaKnown RBP3.47□□□□□ -1.85
SDS3YIL084C SWC5P38326 303 aa3.47□□□□□ -1.85
SDS3YIL084C GPI16P38875 610 aa3.47□□□□□ -1.85
SDS3YIL084C PAC11P40960 533 aa3.47□□□□□ -1.85
SDS3YIL084C YFR018CP43599 363 aa3.47□□□□□ -1.85
SDS3YIL084C MDE1P47095 244 aa3.47□□□□□ -1.85
SDS3YIL084C HST1P53685 503 aa3.47□□□□□ -1.85
SDS3YIL084C YET2Q04210 160 aa3.47□□□□□ -1.85
SDS3YIL084C GRX8Q05926 109 aa3.47□□□□□ -1.85
SDS3YIL084C YPR078CQ06813 372 aa3.47□□□□□ -1.85
SDS3YIL084C IRC25Q07951 179 aa3.47□□□□□ -1.85
SDS3YIL084C YLR030WQ07967 263 aa3.47□□□□□ -1.85
SDS3YIL084C IZH4Q99393 312 aa3.47□□□□□ -1.85
SDS3YIL084C CPA1P07258 411 aaKnown RBP3.46□□□□□ -1.86
SDS3YIL084C SPS19P32573 292 aaKnown RBP3.46□□□□□ -1.86
SDS3YIL084C YEL045CP32616 141 aa3.46□□□□□ -1.86
SDS3YIL084C YOX1P34161 385 aa3.46□□□□□ -1.86
SDS3YIL084C QDR3P38227 689 aa3.46□□□□□ -1.86
SDS3YIL084C SIM1P40472 476 aa3.46□□□□□ -1.86
SDS3YIL084C SDT1P53078 280 aa3.46□□□□□ -1.86
SDS3YIL084C MDM36Q06820 579 aa3.46□□□□□ -1.86
SDS3YIL084C LDB18Q07887 179 aa3.46□□□□□ -1.86
SDS3YIL084C RVS161P25343 265 aaKnown RBP3.45□□□□□ -1.86
SDS3YIL084C MSP1P28737 362 aa3.45□□□□□ -1.86
SDS3YIL084C MEI4P29467 408 aa3.45□□□□□ -1.86
SDS3YIL084C MEI5P32489 222 aa3.45□□□□□ -1.86
SDS3YIL084C AEP1P32493 518 aa3.45□□□□□ -1.86
SDS3YIL084C STP2P38704 541 aa3.45□□□□□ -1.86
SDS3YIL084C SBE22P38814 852 aa3.45□□□□□ -1.86
SDS3YIL084C YEL073CP39974 107 aa3.45□□□□□ -1.86
SDS3YIL084C SPR6Q01684 191 aa3.45□□□□□ -1.86
SDS3YIL084C PRP3Q03338 469 aaPredicted RBP3.45□□□□□ -1.86
SDS3YIL084C ENT5Q03769 411 aaKnown RBP3.45□□□□□ -1.86
SDS3YIL084C LOT6Q07923 191 aa3.45□□□□□ -1.86
SDS3YIL084C DDP1Q99321 188 aaKnown RBP3.45□□□□□ -1.86
SDS3YIL084C RPL6BP05739 176 aaKnown RBP3.44□□□□□ -1.86
SDS3YIL084C CAP2P13517 287 aa3.44□□□□□ -1.86
SDS3YIL084C EXG1P23776 448 aaKnown RBP3.44□□□□□ -1.86
SDS3YIL084C RRP7P25368 297 aaPredicted RBP3.44□□□□□ -1.86
SDS3YIL084C PUP2P32379 260 aa3.44□□□□□ -1.86
SDS3YIL084C PHA2P32452 334 aa3.44□□□□□ -1.86
SDS3YIL084C YEF1P32622 495 aa3.44□□□□□ -1.86
SDS3YIL084C PRP18P33411 251 aaPredicted RBP3.44□□□□□ -1.86
SDS3YIL084C SKT5P34226 696 aa3.44□□□□□ -1.86
SDS3YIL084C DOA1P36037 715 aa3.44□□□□□ -1.86
SDS3YIL084C CAB3P36076 571 aa3.44□□□□□ -1.86
SDS3YIL084C GDT1P38301 280 aaPredicted RBP3.44□□□□□ -1.86
SDS3YIL084C SDS24P38314 527 aa3.44□□□□□ -1.86
SDS3YIL084C MAM33P40513 266 aa3.44□□□□□ -1.86
SDS3YIL084C MRM2P53123 320 aa3.44□□□□□ -1.86
SDS3YIL084C CDC14Q00684 551 aa3.44□□□□□ -1.86
SDS3YIL084C RPL6AQ02326 176 aaKnown RBP3.44□□□□□ -1.86
SDS3YIL084C YDR278CQ05612 105 aa3.44□□□□□ -1.86
SDS3YIL084C FDH1Q08911 376 aa3.44□□□□□ -1.86
SDS3YIL084C SRN2Q99176 213 aa3.44□□□□□ -1.86
SDS3YIL084C SLH1P53327 1967 aaKnown RBP3.43□□□□□ -1.86
SDS3YIL084C ADH2P00331 348 aaKnown RBP3.43□□□□□ -1.86
SDS3YIL084C ARF1P11076 181 aaKnown RBP3.43□□□□□ -1.86
SDS3YIL084C BLI1P35727 113 aa3.43□□□□□ -1.86
SDS3YIL084C SWD3P38123 315 aa3.43□□□□□ -1.86
SDS3YIL084C TRM7P38238 310 aaKnown RBP3.43□□□□□ -1.86
SDS3YIL084C WSS1P38838 269 aa3.43□□□□□ -1.86
SDS3YIL084C AIM18P38884 321 aa3.43□□□□□ -1.86
SDS3YIL084C MNL1P38888 796 aa3.43□□□□□ -1.86
SDS3YIL084C BUD13P46947 266 aaPredicted RBP3.43□□□□□ -1.86
SDS3YIL084C STE24P47154 453 aa3.43□□□□□ -1.86
SDS3YIL084C RHO3Q00245 231 aaKnown RBP3.43□□□□□ -1.86
SDS3YIL084C OSH6Q02201 448 aa3.43□□□□□ -1.86
SDS3YIL084C MEH1Q02205 184 aa3.43□□□□□ -1.86
SDS3YIL084C AAD15Q08361 143 aa3.43□□□□□ -1.86
SDS3YIL084C RNH203Q12338 110 aa3.43□□□□□ -1.86
SDS3YIL084C LDB17Q12342 491 aa3.43□□□□□ -1.86
SDS3YIL084C EAF3Q12432 401 aa3.43□□□□□ -1.86
SDS3YIL084C OPI3P05375 206 aa3.42□□□□□ -1.86
SDS3YIL084C RPL22AP05749 121 aaKnown RBP3.42□□□□□ -1.86
SDS3YIL084C TPK3P05986 398 aa3.42□□□□□ -1.86
SDS3YIL084C PIS1P06197 220 aaKnown RBP3.42□□□□□ -1.86
SDS3YIL084C RPL12AP0CX53 165 aaKnown RBP3.42□□□□□ -1.86
SDS3YIL084C RPL12BP0CX54 165 aa3.42□□□□□ -1.86
SDS3YIL084C YSR3P23501 404 aa3.42□□□□□ -1.86
SDS3YIL084C MRPL15P36523 253 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms