RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C FIT1Q04433 528 aa1.02□□□□□ -2.25
VAM6YDL077C GIM5Q04493 163 aa1.02□□□□□ -2.25
VAM6YDL077C YMR315WQ04869 349 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C MFB1Q04922 465 aa1.02□□□□□ -2.25
VAM6YDL077C MSC3Q05812 728 aa1.02□□□□□ -2.25
VAM6YDL077C YPR098CQ06089 161 aa1.02□□□□□ -2.25
VAM6YDL077C PRP11Q07350 266 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C YDL086WQ07505 273 aa1.02□□□□□ -2.25
VAM6YDL077C HEM25Q07534 307 aa1.02□□□□□ -2.25
VAM6YDL077C YFH1Q07540 174 aa1.02□□□□□ -2.25
VAM6YDL077C ATG10Q07879 167 aa1.02□□□□□ -2.25
VAM6YDL077C PLB3Q08108 686 aa1.02□□□□□ -2.25
VAM6YDL077C IRC10Q08118 586 aa1.02□□□□□ -2.25
VAM6YDL077C YOL131WQ08270 108 aa1.02□□□□□ -2.25
VAM6YDL077C ENV7Q12003 364 aa1.02□□□□□ -2.25
VAM6YDL077C BTS1Q12051 335 aa1.02□□□□□ -2.25
VAM6YDL077C YPL245WQ12179 454 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C RBD2Q12270 262 aa1.02□□□□□ -2.25
VAM6YDL077C SUS1Q6WNK7 96 aa1.02□□□□□ -2.25
VAM6YDL077C PET20Q99373 253 aa1.02□□□□□ -2.25
VAM6YDL077C SCEIP03882 235 aa1.01□□□□□ -2.25
VAM6YDL077C HXK2P04807 486 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C RAD6P06104 172 aa1.01□□□□□ -2.25
VAM6YDL077C TY2A-LR1P0C2J4 438 aa1.01□□□□□ -2.25
VAM6YDL077C YFR010W-AP0C5N0 62 aa1.01□□□□□ -2.25
VAM6YDL077C SAM1P10659 382 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C ERS1P17261 260 aa1.01□□□□□ -2.25
VAM6YDL077C ZRC1P20107 442 aa1.01□□□□□ -2.25
VAM6YDL077C CKS1P20486 150 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C MSN1P22148 382 aa1.01□□□□□ -2.25
VAM6YDL077C MAK31P23059 88 aa1.01□□□□□ -2.25
VAM6YDL077C YSR3P23501 404 aa1.01□□□□□ -2.25
VAM6YDL077C IFM1P25038 676 aa1.01□□□□□ -2.25
VAM6YDL077C SLM5P25345 492 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C TY2A-CP25383 438 aa1.01□□□□□ -2.25
VAM6YDL077C YCL002CP25565 263 aa1.01□□□□□ -2.25
VAM6YDL077C PPZ1P26570 692 aa1.01□□□□□ -2.25
VAM6YDL077C COQ3P27680 312 aa1.01□□□□□ -2.25
VAM6YDL077C ARP2P32381 391 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C MDH3P32419 343 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
VAM6YDL077C FRE1P32791 686 aa1.01□□□□□ -2.25
VAM6YDL077C SKG6P32900 734 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C SKT5P34226 696 aa1.01□□□□□ -2.25
VAM6YDL077C YKL187CP34231 750 aa1.01□□□□□ -2.25
VAM6YDL077C ZRT3P34240 503 aa1.01□□□□□ -2.25
VAM6YDL077C SFK1P35735 353 aa1.01□□□□□ -2.25
VAM6YDL077C PDX3P38075 228 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C MRPS9P38120 278 aa1.01□□□□□ -2.25
VAM6YDL077C DTR1P38125 572 aa1.01□□□□□ -2.25
VAM6YDL077C YHL044WP38727 235 aa1.01□□□□□ -2.25
VAM6YDL077C FSH1P38777 243 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C SFB3P38810 929 aa1.01□□□□□ -2.25
VAM6YDL077C ASP1P38986 381 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C SPO73P40031 143 aa1.01□□□□□ -2.25
VAM6YDL077C YER158CP40095 573 aa1.01□□□□□ -2.25
VAM6YDL077C GLC8P41818 229 aa1.01□□□□□ -2.25
VAM6YDL077C CAF16P43569 289 aa1.01□□□□□ -2.25
VAM6YDL077C IRC8P47046 822 aa1.01□□□□□ -2.25
VAM6YDL077C YJL016WP47072 561 aa1.01□□□□□ -2.25
VAM6YDL077C YJR012CP47087 207 aa1.01□□□□□ -2.25
VAM6YDL077C SNN1P48232 102 aa1.01□□□□□ -2.25
VAM6YDL077C RAD17P48581 401 aa1.01□□□□□ -2.25
VAM6YDL077C CTR1P49573 406 aa1.01□□□□□ -2.25
VAM6YDL077C DIE2P50076 525 aa1.01□□□□□ -2.25
VAM6YDL077C MRK1P50873 501 aa1.01□□□□□ -2.25
VAM6YDL077C TAD1P53065 400 aa1.01□□□□□ -2.25
VAM6YDL077C PKP2P53170 491 aa1.01□□□□□ -2.25
VAM6YDL077C YGR151CP53287 111 aa1.01□□□□□ -2.25
VAM6YDL077C TIM13P53299 105 aa1.01□□□□□ -2.25
VAM6YDL077C SAY1P53324 424 aa1.01□□□□□ -2.25
VAM6YDL077C MPA43P53583 542 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C YIP3P53633 176 aa1.01□□□□□ -2.25
VAM6YDL077C DUS1P53759 423 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C APJ1P53940 528 aa1.01□□□□□ -2.25
VAM6YDL077C YNL033WP53964 284 aa1.01□□□□□ -2.25
VAM6YDL077C YNL019CP53975 284 aa1.01□□□□□ -2.25
VAM6YDL077C YLR460CP54007 376 aa1.01□□□□□ -2.25
VAM6YDL077C KIN4Q01919 800 aa1.01□□□□□ -2.25
VAM6YDL077C MRP51Q02950 344 aa1.01□□□□□ -2.25
VAM6YDL077C DIG1Q03063 452 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C TY2A-DR2Q03483 438 aa1.01□□□□□ -2.25
VAM6YDL077C MAK3Q03503 176 aa1.01□□□□□ -2.25
VAM6YDL077C CGI121Q03705 181 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C MTQ2Q03920 221 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C MRX8Q05473 314 aa1.01□□□□□ -2.25
VAM6YDL077C VID22Q05934 901 aa1.01□□□□□ -2.25
VAM6YDL077C YLR173WQ06247 608 aa1.01□□□□□ -2.25
VAM6YDL077C ANT1Q06497 328 aa1.01□□□□□ -2.25
VAM6YDL077C RAD34Q06665 692 aa1.01□□□□□ -2.25
VAM6YDL077C CTR3Q06686 241 aa1.01□□□□□ -2.25
VAM6YDL077C RSC58Q07979 502 aa1.01□□□□□ -2.25
VAM6YDL077C YOR385WQ08909 290 aa1.01□□□□□ -2.25
VAM6YDL077C SAM4Q08985 325 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C CWC2Q12046 339 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C NMD4Q12129 218 aa1.01□□□□□ -2.25
VAM6YDL077C FRE8Q12209 686 aa1.01□□□□□ -2.25
VAM6YDL077C TY2A-BQ12260 438 aa1.01□□□□□ -2.25
VAM6YDL077C TY2A-OR2Q12293 438 aa1.01□□□□□ -2.25
VAM6YDL077C TY2A-DR1Q12392 438 aa1.01□□□□□ -2.25
VAM6YDL077C TY2A-OR1Q12439 438 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms