RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C MNL1P38888 796 aa1.44□□□□□ -2.18
VPS20YMR077C LYS12P40495 371 aaKnown RBP1.44□□□□□ -2.18
VPS20YMR077C MEH1Q02205 184 aa1.44□□□□□ -2.18
VPS20YMR077C CGI121Q03705 181 aaKnown RBP1.44□□□□□ -2.18
VPS20YMR077C MDH1P17505 334 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
VPS20YMR077C YOL075CQ08234 1294 aa1.43□□□□□ -2.18
VPS20YMR077C SPP381P38282 291 aaPredicted RBP1.42□□□□□ -2.18
VPS20YMR077C NAB3P38996 802 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
VPS20YMR077C YER188WP40103 239 aa1.42□□□□□ -2.18
VPS20YMR077C TFC7Q12415 435 aa1.42□□□□□ -2.18
VPS20YMR077C PDX1P16451 410 aa1.41□□□□□ -2.18
VPS20YMR077C PHO80P20052 293 aa1.41□□□□□ -2.18
VPS20YMR077C YKL187CP34231 750 aa1.41□□□□□ -2.18
VPS20YMR077C POP2P39008 433 aa1.41□□□□□ -2.18
VPS20YMR077C YNL040WP53960 456 aaPredicted RBP1.41□□□□□ -2.18
VPS20YMR077C TAF10Q12030 206 aa1.41□□□□□ -2.18
VPS20YMR077C SRN2Q99176 213 aa1.41□□□□□ -2.18
VPS20YMR077C NRG2P38082 220 aa1.4□□□□□ -2.19
VPS20YMR077C SRP72P38688 640 aaKnown RBP1.4□□□□□ -2.19
VPS20YMR077C LST7P53237 242 aa1.4□□□□□ -2.19
VPS20YMR077C RMT2Q03305 412 aa1.4□□□□□ -2.19
VPS20YMR077C TRM10Q12400 293 aa1.4□□□□□ -2.19
VPS20YMR077C YOL163WP0CF20 169 aa1.39□□□□□ -2.19
VPS20YMR077C DAP2P18962 818 aa1.39□□□□□ -2.19
VPS20YMR077C FAR1P21268 830 aa1.39□□□□□ -2.19
VPS20YMR077C MRPL20P22354 195 aaPredicted RBP1.39□□□□□ -2.19
VPS20YMR077C CAB3P36076 571 aa1.39□□□□□ -2.19
VPS20YMR077C SRB7P47822 140 aa1.39□□□□□ -2.19
VPS20YMR077C RET3P53600 189 aa1.39□□□□□ -2.19
VPS20YMR077C INH1P01097 85 aa1.38□□□□□ -2.19
VPS20YMR077C AQR1P53943 586 aa1.38□□□□□ -2.19
VPS20YMR077C UBX2Q04228 584 aa1.38□□□□□ -2.19
VPS20YMR077C TY3A-GQ12173 290 aa1.38□□□□□ -2.19
VPS20YMR077C TY3A-IQ99219 290 aa1.38□□□□□ -2.19
VPS20YMR077C LCB2P40970 561 aa1.37□□□□□ -2.19
VPS20YMR077C ACT1P60010 375 aaKnown RBP1.37□□□□□ -2.19
VPS20YMR077C MYO5Q04439 1219 aaKnown RBP1.37□□□□□ -2.19
VPS20YMR077C MHP1P43638 1398 aa1.36□□□□□ -2.19
VPS20YMR077C DSE1P40077 573 aa1.36□□□□□ -2.19
VPS20YMR077C LCP5P40079 357 aaPredicted RBP1.36□□□□□ -2.19
VPS20YMR077C DSK2P48510 373 aa1.36□□□□□ -2.19
VPS20YMR077C LSG1P53145 640 aaKnown RBP1.36□□□□□ -2.19
VPS20YMR077C SDS23P53172 527 aa1.36□□□□□ -2.19
VPS20YMR077C ERP3Q12403 225 aa1.36□□□□□ -2.19
VPS20YMR077C RPC53P25441 422 aa1.35□□□□□ -2.19
VPS20YMR077C MSK1P32048 576 aa1.35□□□□□ -2.19
VPS20YMR077C EPL1P43572 832 aa1.35□□□□□ -2.19
VPS20YMR077C SPH1Q06160 661 aa1.35□□□□□ -2.19
VPS20YMR077C TIM22Q12328 207 aa1.35□□□□□ -2.19
VPS20YMR077C YFR054CP43622 192 aa1.34□□□□□ -2.19
VPS20YMR077C RPN5Q12250 445 aaKnown RBP1.34□□□□□ -2.19
VPS20YMR077C RPN6Q12377 434 aa1.34□□□□□ -2.19
VPS20YMR077C ISA2Q12425 185 aa1.34□□□□□ -2.19
VPS20YMR077C YAK1P14680 807 aa1.33□□□□□ -2.2
VPS20YMR077C YBL028CP38202 106 aa1.33□□□□□ -2.2
VPS20YMR077C EDC2P40023 145 aaPredicted RBP1.33□□□□□ -2.2
VPS20YMR077C DAN1P47178 298 aa1.33□□□□□ -2.2
VPS20YMR077C VPS68Q12016 184 aa1.33□□□□□ -2.2
VPS20YMR077C TFS1P14306 219 aa1.32□□□□□ -2.2
VPS20YMR077C RPN12P32496 274 aa1.32□□□□□ -2.2
VPS20YMR077C PMT4P46971 762 aa1.32□□□□□ -2.2
VPS20YMR077C UFD1P53044 361 aa1.32□□□□□ -2.2
VPS20YMR077C TPC1P53257 314 aa1.32□□□□□ -2.2
VPS20YMR077C YPR078CQ06813 372 aa1.32□□□□□ -2.2
VPS20YMR077C GPM3Q12326 303 aa1.32□□□□□ -2.2
VPS20YMR077C PRE7P23724 241 aaKnown RBP1.31□□□□□ -2.2
VPS20YMR077C DBR1P24309 405 aaKnown RBP1.31□□□□□ -2.2
VPS20YMR077C BUD27P43573 796 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
VPS20YMR077C ARF2P19146 181 aaKnown RBP1.3□□□□□ -2.2
VPS20YMR077C ATG7P38862 630 aa1.3□□□□□ -2.2
VPS20YMR077C CSM3Q04659 317 aa1.3□□□□□ -2.2
VPS20YMR077C YOR012WQ12351 137 aa1.3□□□□□ -2.2
VPS20YMR077C FSH3Q99369 266 aa1.3□□□□□ -2.2
VPS20YMR077C SCO1P23833 295 aa1.29□□□□□ -2.2
VPS20YMR077C RRT12P25381 491 aa1.29□□□□□ -2.2
VPS20YMR077C MLH1P38920 769 aa1.29□□□□□ -2.2
VPS20YMR077C SSU72P53538 206 aaPredicted RBP1.29□□□□□ -2.2
VPS20YMR077C CDC42P19073 191 aa1.28□□□□□ -2.2
VPS20YMR077C VPS1P21576 704 aaKnown RBP1.28□□□□□ -2.2
VPS20YMR077C JNM1P36224 373 aa1.28□□□□□ -2.2
VPS20YMR077C CIK1Q01649 594 aa1.28□□□□□ -2.2
VPS20YMR077C PEX27Q08580 376 aa1.28□□□□□ -2.2
VPS20YMR077C CBP2P03874 630 aaPredicted RBP1.27□□□□□ -2.21
VPS20YMR077C RPL26AP05743 127 aaKnown RBP1.27□□□□□ -2.21
VPS20YMR077C MRPS5P33759 307 aa1.27□□□□□ -2.21
VPS20YMR077C KTI12P34253 313 aaKnown RBP1.27□□□□□ -2.21
VPS20YMR077C MPE1P35728 441 aaKnown RBP1.27□□□□□ -2.21
VPS20YMR077C SNL1P40548 159 aa1.27□□□□□ -2.21
VPS20YMR077C RPL26BP53221 127 aaKnown RBP1.27□□□□□ -2.21
VPS20YMR077C SMP3Q04174 516 aa1.27□□□□□ -2.21
VPS20YMR077C AIM33Q04516 312 aa1.27□□□□□ -2.21
VPS20YMR077C RDS3Q06835 107 aaPredicted RBP1.27□□□□□ -2.21
VPS20YMR077C PFK27Q12471 397 aaPredicted RBP1.27□□□□□ -2.21
VPS20YMR077C YHR086W-AQ3E746 53 aa1.27□□□□□ -2.21
VPS20YMR077C RPS16AP0CX51 143 aaKnown RBP1.26□□□□□ -2.21
VPS20YMR077C RPS16BP0CX52 143 aaKnown RBP1.26□□□□□ -2.21
VPS20YMR077C PSO2P30620 661 aa1.26□□□□□ -2.21
VPS20YMR077C YHL044WP38727 235 aa1.26□□□□□ -2.21
VPS20YMR077C YMR166CQ03829 368 aa1.26□□□□□ -2.21
VPS20YMR077C RPL1AP0CX43 217 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms