RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C SAM50P53969 484 aa2.81□□□□□ -1.96
SDO1YLR022C RHO4Q00246 291 aa2.81□□□□□ -1.96
SDO1YLR022C RPL6AQ02326 176 aaKnown RBP2.81□□□□□ -1.96
SDO1YLR022C ERV41Q04651 352 aa2.81□□□□□ -1.96
SDO1YLR022C ADH6Q04894 360 aaKnown RBP2.81□□□□□ -1.96
SDO1YLR022C RRP9Q06506 573 aaKnown RBP2.81□□□□□ -1.96
SDO1YLR022C YPR078CQ06813 372 aa2.81□□□□□ -1.96
SDO1YLR022C NFI1Q12216 726 aa2.81□□□□□ -1.96
SDO1YLR022C FRE6Q12473 712 aa2.81□□□□□ -1.96
SDO1YLR022C RRP7P25368 297 aaPredicted RBP2.8□□□□□ -1.96
SDO1YLR022C URA7P28274 579 aaKnown RBP2.8□□□□□ -1.96
SDO1YLR022C ATS1P31386 333 aa2.8□□□□□ -1.96
SDO1YLR022C NDI1P32340 513 aa2.8□□□□□ -1.96
SDO1YLR022C MRPS5P33759 307 aa2.8□□□□□ -1.96
SDO1YLR022C HCS1P34243 683 aa2.8□□□□□ -1.96
SDO1YLR022C MTC4P38335 694 aaKnown RBP2.8□□□□□ -1.96
SDO1YLR022C YMR262WP38430 313 aa2.8□□□□□ -1.96
SDO1YLR022C SEN34P39707 275 aa2.8□□□□□ -1.96
SDO1YLR022C SEO1P39709 593 aa2.8□□□□□ -1.96
SDO1YLR022C PCL7P40186 285 aa2.8□□□□□ -1.96
SDO1YLR022C YJL213WP40896 331 aa2.8□□□□□ -1.96
SDO1YLR022C CAK1P43568 368 aaPredicted RBP2.8□□□□□ -1.96
SDO1YLR022C YPL107WQ02873 248 aa2.8□□□□□ -1.96
SDO1YLR022C KAP120Q02932 1032 aa2.8□□□□□ -1.96
SDO1YLR022C EBS1Q03466 884 aaKnown RBP2.8□□□□□ -1.96
SDO1YLR022C FIN1Q03898 291 aa2.8□□□□□ -1.96
SDO1YLR022C YMR087WQ04299 284 aa2.8□□□□□ -1.96
SDO1YLR022C MIX14Q04341 121 aa2.8□□□□□ -1.96
SDO1YLR022C MGR3Q04472 501 aa2.8□□□□□ -1.96
SDO1YLR022C DPB4Q04603 196 aaKnown RBP2.8□□□□□ -1.96
SDO1YLR022C SMA2Q04658 369 aa2.8□□□□□ -1.96
SDO1YLR022C IVY1Q04934 453 aa2.8□□□□□ -1.96
SDO1YLR022C BOP2Q06150 570 aa2.8□□□□□ -1.96
SDO1YLR022C PIN3Q06449 215 aa2.8□□□□□ -1.96
SDO1YLR022C FMP40Q08968 688 aaPredicted RBP2.8□□□□□ -1.96
SDO1YLR022C PRP46Q12417 451 aaPredicted RBP2.8□□□□□ -1.96
SDO1YLR022C SFG1Q12507 346 aa2.8□□□□□ -1.96
SDO1YLR022C YOL159C-AQ3E769 90 aa2.8□□□□□ -1.96
SDO1YLR022C MTR10Q99189 972 aa2.8□□□□□ -1.96
SDO1YLR022C CDC37P06101 506 aaKnown RBP2.79□□□□□ -1.96
SDO1YLR022C GDH1P07262 454 aaKnown RBP2.79□□□□□ -1.96
SDO1YLR022C RPC40P07703 335 aaKnown RBP2.79□□□□□ -1.96
SDO1YLR022C YAR066WP0CX18 203 aa2.79□□□□□ -1.96
SDO1YLR022C YHR214WP0CX19 203 aa2.79□□□□□ -1.96
SDO1YLR022C BUD5P25300 642 aaPredicted RBP2.79□□□□□ -1.96
SDO1YLR022C CRM1P30822 1084 aaKnown RBP2.79□□□□□ -1.96
SDO1YLR022C ZIP1P31111 875 aa2.79□□□□□ -1.96
SDO1YLR022C MRE11P32829 692 aa2.79□□□□□ -1.96
SDO1YLR022C LTV1P34078 463 aa2.79□□□□□ -1.96
SDO1YLR022C SIP2P34164 415 aaKnown RBP2.79□□□□□ -1.96
SDO1YLR022C RRP1P35178 278 aaPredicted RBP2.79□□□□□ -1.96
SDO1YLR022C YKT6P36015 200 aaKnown RBP2.79□□□□□ -1.96
SDO1YLR022C ROT2P38138 954 aa2.79□□□□□ -1.96
SDO1YLR022C YSW1P38280 609 aa2.79□□□□□ -1.96
SDO1YLR022C ICS2P38284 255 aa2.79□□□□□ -1.96
SDO1YLR022C INM1P38710 295 aa2.79□□□□□ -1.96
SDO1YLR022C WSS1P38838 269 aa2.79□□□□□ -1.96
SDO1YLR022C FRT2P39734 528 aa2.79□□□□□ -1.96
SDO1YLR022C ALG5P40350 334 aa2.79□□□□□ -1.96
SDO1YLR022C UTP25P40498 721 aaKnown RBP2.79□□□□□ -1.96
SDO1YLR022C RPR2P40571 144 aa2.79□□□□□ -1.96
SDO1YLR022C RPL10P41805 221 aaKnown RBP2.79□□□□□ -1.96
SDO1YLR022C HXT14P42833 540 aa2.79□□□□□ -1.96
SDO1YLR022C RPE1P46969 238 aa2.79□□□□□ -1.96
SDO1YLR022C MPS2P53159 387 aa2.79□□□□□ -1.96
SDO1YLR022C YGR067CP53243 804 aa2.79□□□□□ -1.96
SDO1YLR022C MTQ1P53944 314 aa2.79□□□□□ -1.96
SDO1YLR022C PET117Q02771 107 aa2.79□□□□□ -1.96
SDO1YLR022C HOT1Q03213 719 aa2.79□□□□□ -1.96
SDO1YLR022C DCI1Q08558 271 aa2.79□□□□□ -1.96
SDO1YLR022C YLL056CQ12177 298 aa2.79□□□□□ -1.96
SDO1YLR022C LDB17Q12342 491 aa2.79□□□□□ -1.96
SDO1YLR022C SPE4Q12455 300 aa2.79□□□□□ -1.96
SDO1YLR022C SET6Q12529 373 aa2.79□□□□□ -1.96
SDO1YLR022C BRR1Q99177 341 aaPredicted RBP2.79□□□□□ -1.96
SDO1YLR022C MF(ALPHA)1P01149 165 aa2.78□□□□□ -1.96
SDO1YLR022C COR1P07256 457 aa2.78□□□□□ -1.96
SDO1YLR022C YSF3P0C074 85 aaPredicted RBP2.78□□□□□ -1.96
SDO1YLR022C MCK1P21965 375 aaKnown RBP2.78□□□□□ -1.96
SDO1YLR022C DAL80P26343 269 aa2.78□□□□□ -1.96
SDO1YLR022C NDC1P32500 655 aa2.78□□□□□ -1.96
SDO1YLR022C SUI1P32911 108 aaKnown RBP2.78□□□□□ -1.96
SDO1YLR022C SEC66P33754 206 aa2.78□□□□□ -1.96
SDO1YLR022C YNK1P36010 153 aaKnown RBP2.78□□□□□ -1.96
SDO1YLR022C NTC20P38302 140 aaPredicted RBP2.78□□□□□ -1.96
SDO1YLR022C YHL044WP38727 235 aa2.78□□□□□ -1.96
SDO1YLR022C PTH1P38876 190 aaKnown RBP2.78□□□□□ -1.96
SDO1YLR022C FAR3P46671 204 aa2.78□□□□□ -1.96
SDO1YLR022C PET130P47065 347 aa2.78□□□□□ -1.96
SDO1YLR022C YJR141WP47172 347 aaPredicted RBP2.78□□□□□ -1.96
SDO1YLR022C RSM23Q01163 450 aa2.78□□□□□ -1.96
SDO1YLR022C VPS20Q04272 221 aa2.78□□□□□ -1.96
SDO1YLR022C SOV1Q04748 898 aa2.78□□□□□ -1.96
SDO1YLR022C YPR174CQ06616 221 aaPredicted RBP2.78□□□□□ -1.96
SDO1YLR022C RPN5Q12250 445 aaKnown RBP2.78□□□□□ -1.96
SDO1YLR022C PSY3Q12318 242 aa2.78□□□□□ -1.96
SDO1YLR022C FOL3Q12676 427 aaPredicted RBP2.78□□□□□ -1.96
SDO1YLR022C HEM4P06174 275 aa2.77□□□□□ -1.97
SDO1YLR022C LEU4P06208 619 aaKnown RBP2.77□□□□□ -1.97
SDO1YLR022C ARD1P07347 238 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms