RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W MAK16P10962 306 aaPredicted RBP8.91□□□□□ -0.98
TFB4YPR056W CSE4P36012 229 aa8.91□□□□□ -0.98
TFB4YPR056W FIG4P42837 879 aa8.9□□□□□ -0.98
TFB4YPR056W NAF1P53919 492 aaKnown RBP8.89□□□□□ -0.99
TFB4YPR056W YJR115WP47152 169 aa8.88□□□□□ -0.99
TFB4YPR056W UGA3P26370 528 aa8.87□□□□□ -0.99
TFB4YPR056W BRL1P38770 471 aa8.87□□□□□ -0.99
TFB4YPR056W ENV9Q08651 330 aa8.87□□□□□ -0.99
TFB4YPR056W TEC1P18412 486 aa8.86□□□□□ -0.99
TFB4YPR056W EMW1P42842 904 aaKnown RBP8.86□□□□□ -0.99
TFB4YPR056W MET22P32179 357 aa8.85□□□□□ -0.99
TFB4YPR056W SPT5P27692 1063 aaKnown RBP8.83□□□□□ -1
TFB4YPR056W YBL086CP38177 466 aa8.83□□□□□ -1
TFB4YPR056W YPR084WQ06821 456 aa8.83□□□□□ -1
TFB4YPR056W GUT2P32191 649 aa8.81□□□□□ -1
TFB4YPR056W PTK2P47116 818 aaKnown RBP8.81□□□□□ -1
TFB4YPR056W TFB3Q03290 321 aa8.81□□□□□ -1
TFB4YPR056W YDR444WQ04093 687 aa8.81□□□□□ -1
TFB4YPR056W YBL036CP38197 257 aa8.8□□□□□ -1
TFB4YPR056W LCB5Q06147 687 aaKnown RBP8.8□□□□□ -1
TFB4YPR056W SRF1Q12516 437 aa8.79□□□□□ -1
TFB4YPR056W GAR1P28007 205 aaKnown RBP8.77□□□□□ -1.01
TFB4YPR056W NUP85P46673 744 aa8.77□□□□□ -1.01
TFB4YPR056W APP1P53933 587 aa8.77□□□□□ -1.01
TFB4YPR056W URN1Q06525 465 aaKnown RBP8.77□□□□□ -1.01
TFB4YPR056W FRA1Q07825 749 aa8.77□□□□□ -1.01
TFB4YPR056W RGA1P39083 1007 aa8.76□□□□□ -1.01
TFB4YPR056W MRX12P47084 519 aa8.76□□□□□ -1.01
TFB4YPR056W ORC1P54784 914 aaPredicted RBP8.76□□□□□ -1.01
TFB4YPR056W ARG82P07250 355 aa8.75□□□□□ -1.01
TFB4YPR056W STE20Q03497 939 aaKnown RBP8.75□□□□□ -1.01
TFB4YPR056W YLR346CQ06139 101 aa8.75□□□□□ -1.01
TFB4YPR056W HGH1P48362 394 aaKnown RBP8.74□□□□□ -1.01
TFB4YPR056W ITT1Q04638 464 aa8.74□□□□□ -1.01
TFB4YPR056W PKC1P24583 1151 aa8.73□□□□□ -1.01
TFB4YPR056W MKS1P34072 584 aa8.73□□□□□ -1.01
TFB4YPR056W YPL062WQ02781 134 aa8.73□□□□□ -1.01
TFB4YPR056W GBP2P25555 427 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01 RIP-Chip
TFB4YPR056W AAD14P42884 376 aa8.72□□□□□ -1.01
TFB4YPR056W FBP26P32604 452 aa8.7□□□□□ -1.02
TFB4YPR056W OPT2Q06593 877 aa8.69□□□□□ -1.02
TFB4YPR056W MCM16Q12262 181 aa8.69□□□□□ -1.02
TFB4YPR056W GLY1P37303 387 aaKnown RBP8.68□□□□□ -1.02
TFB4YPR056W YPP1P46951 817 aa8.68□□□□□ -1.02
TFB4YPR056W STE6P12866 1290 aa8.67□□□□□ -1.02
TFB4YPR056W APL6P46682 809 aa8.67□□□□□ -1.02
TFB4YPR056W DFG5Q05031 458 aa8.67□□□□□ -1.02
TFB4YPR056W ATG20Q07528 640 aa8.67□□□□□ -1.02
TFB4YPR056W SUP45P12385 437 aaKnown RBP8.66□□□□□ -1.02
TFB4YPR056W YDJ1P25491 409 aaKnown RBP8.66□□□□□ -1.02
TFB4YPR056W BIO2P32451 375 aa8.66□□□□□ -1.02
TFB4YPR056W LSC2P53312 427 aa8.66□□□□□ -1.02
TFB4YPR056W BDS1Q08347 646 aa8.66□□□□□ -1.02
TFB4YPR056W RPP2BP02400 110 aaKnown RBP8.65□□□□□ -1.02
TFB4YPR056W EMP47P43555 445 aa8.65□□□□□ -1.02
TFB4YPR056W ISU1Q03020 165 aa8.65□□□□□ -1.02
TFB4YPR056W MIP1P15801 1254 aa8.64□□□□□ -1.03
TFB4YPR056W ACO2P39533 789 aa8.64□□□□□ -1.03
TFB4YPR056W UBP2Q01476 1272 aa8.63□□□□□ -1.03
TFB4YPR056W YDL176WQ12027 708 aa8.63□□□□□ -1.03
TFB4YPR056W ATG3P40344 310 aa8.62□□□□□ -1.03
TFB4YPR056W YJR098CP47139 656 aa8.62□□□□□ -1.03
TFB4YPR056W UTP13Q05946 817 aaKnown RBP8.62□□□□□ -1.03
TFB4YPR056W SCW11P53189 542 aa8.61□□□□□ -1.03
TFB4YPR056W ISF1P32488 338 aa8.59□□□□□ -1.03
TFB4YPR056W YJL007CP47080 104 aa8.59□□□□□ -1.03
TFB4YPR056W YNL108CP53929 270 aa8.59□□□□□ -1.03
TFB4YPR056W TY1A-BLQ12266 440 aa8.59□□□□□ -1.03
TFB4YPR056W SPT2P06843 333 aaPredicted RBP8.57□□□□□ -1.04
TFB4YPR056W DLD1P32891 587 aa8.57□□□□□ -1.04
TFB4YPR056W YML020WQ03722 664 aa8.57□□□□□ -1.04
TFB4YPR056W ENO2P00925 437 aaKnown RBP8.56□□□□□ -1.04
TFB4YPR056W ISR1Q06098 443 aaKnown RBP8.56□□□□□ -1.04
TFB4YPR056W VTC4P47075 721 aa8.55□□□□□ -1.04
TFB4YPR056W RIM21P48565 533 aa8.55□□□□□ -1.04
TFB4YPR056W TCB1Q12466 1186 aa8.55□□□□□ -1.04
TFB4YPR056W BIM1P40013 344 aa8.54□□□□□ -1.04
TFB4YPR056W CAF120P53836 1060 aa8.54□□□□□ -1.04
TFB4YPR056W DLD3P39976 496 aaKnown RBP8.53□□□□□ -1.04
TFB4YPR056W UTR2P32623 467 aa8.51□□□□□ -1.05
TFB4YPR056W OSH7P38755 437 aa8.51□□□□□ -1.05
TFB4YPR056W SOH1P38633 127 aa8.5□□□□□ -1.05
TFB4YPR056W HAL5P38970 855 aaKnown RBP8.5□□□□□ -1.05
TFB4YPR056W ATG32P40458 529 aa8.5□□□□□ -1.05
TFB4YPR056W RGA2Q06407 1009 aa8.5□□□□□ -1.05
TFB4YPR056W WTM2Q12206 467 aa8.5□□□□□ -1.05
TFB4YPR056W TIF1P10081 395 aaKnown RBP8.49□□□□□ -1.05
TFB4YPR056W DAL1P32375 460 aa8.49□□□□□ -1.05
TFB4YPR056W YIR007WP40566 764 aa8.49□□□□□ -1.05
TFB4YPR056W MRX10Q05648 414 aa8.49□□□□□ -1.05
TFB4YPR056W TBS1P38114 1094 aa8.48□□□□□ -1.05
TFB4YPR056W RPL34BP40525 121 aaKnown RBP8.48□□□□□ -1.05
TFB4YPR056W NOP8Q08287 484 aaPredicted RBP8.48□□□□□ -1.05
TFB4YPR056W DAT1P13483 248 aaKnown RBP8.46□□□□□ -1.06
TFB4YPR056W RDS2P19541 446 aaKnown RBP8.46□□□□□ -1.06
TFB4YPR056W MSN5P52918 1224 aa8.46□□□□□ -1.06
TFB4YPR056W RTG2P32608 588 aaKnown RBP8.45□□□□□ -1.06
TFB4YPR056W TY1A-MR1Q04215 440 aa8.45□□□□□ -1.06
TFB4YPR056W HDA3Q06623 655 aa8.45□□□□□ -1.06
TFB4YPR056W CDC19P00549 500 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms