RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C YDR444WQ04093 687 aa7.72□□□□□ -1.17
SNF8YPL002C MSB3P48566 633 aaPredicted RBP7.71□□□□□ -1.18
SNF8YPL002C GBP2P25555 427 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
SNF8YPL002C BUD4P47136 1447 aa7.69□□□□□ -1.18
SNF8YPL002C ARG8P18544 423 aa7.69□□□□□ -1.18
SNF8YPL002C MRT4P33201 236 aaKnown RBP7.69□□□□□ -1.18
SNF8YPL002C VAC17P25591 423 aa7.68□□□□□ -1.18
SNF8YPL002C LCB5Q06147 687 aaKnown RBP7.68□□□□□ -1.18
SNF8YPL002C LEU3P08638 886 aa7.67□□□□□ -1.18
SNF8YPL002C UGA3P26370 528 aa7.67□□□□□ -1.18
SNF8YPL002C THO2P53552 1597 aaKnown RBP7.67□□□□□ -1.18
SNF8YPL002C ITT1Q04638 464 aa7.66□□□□□ -1.18
SNF8YPL002C KIN1P13185 1064 aa7.65□□□□□ -1.18
SNF8YPL002C RAD59Q12223 238 aa7.65□□□□□ -1.18
SNF8YPL002C HIR3P47171 1648 aa7.64□□□□□ -1.19
SNF8YPL002C PTK2P47116 818 aaKnown RBP7.64□□□□□ -1.19
SNF8YPL002C YDL176WQ12027 708 aa7.62□□□□□ -1.19
SNF8YPL002C FIG4P42837 879 aa7.61□□□□□ -1.19
SNF8YPL002C SRF1Q12516 437 aa7.6□□□□□ -1.19
SNF8YPL002C MDS3P53094 1487 aa7.6□□□□□ -1.19
SNF8YPL002C APP1P53933 587 aa7.59□□□□□ -1.19
SNF8YPL002C YBL086CP38177 466 aa7.58□□□□□ -1.2
SNF8YPL002C OPT2Q06593 877 aa7.57□□□□□ -1.2
SNF8YPL002C SSA2P10592 639 aaKnown RBP7.56□□□□□ -1.2
SNF8YPL002C EMW1P42842 904 aaKnown RBP7.56□□□□□ -1.2
SNF8YPL002C RPN1P38764 993 aaKnown RBP7.55□□□□□ -1.2
SNF8YPL002C RTT106P40161 455 aa7.55□□□□□ -1.2
SNF8YPL002C REV3P14284 1504 aa7.55□□□□□ -1.2
SNF8YPL002C GUA1P38625 525 aaKnown RBP7.54□□□□□ -1.2
SNF8YPL002C NUP85P46673 744 aa7.54□□□□□ -1.2
SNF8YPL002C YPR084WQ06821 456 aa7.54□□□□□ -1.2
SNF8YPL002C TEC1P18412 486 aa7.53□□□□□ -1.2
SNF8YPL002C MAK16P10962 306 aaPredicted RBP7.52□□□□□ -1.21
SNF8YPL002C AAD14P42884 376 aa7.52□□□□□ -1.21
SNF8YPL002C CAF120P53836 1060 aa7.51□□□□□ -1.21
SNF8YPL002C YLR346CQ06139 101 aa7.51□□□□□ -1.21
SNF8YPL002C ARG82P07250 355 aa7.5□□□□□ -1.21
SNF8YPL002C ACO2P39533 789 aa7.5□□□□□ -1.21
SNF8YPL002C XRN1P22147 1528 aaKnown RBP7.5□□□□□ -1.21
SNF8YPL002C GLY1P37303 387 aaKnown RBP7.49□□□□□ -1.21
SNF8YPL002C BPT1P14772 1559 aa7.48□□□□□ -1.21
SNF8YPL002C MKS1P34072 584 aa7.48□□□□□ -1.21
SNF8YPL002C PEP1P32319 1579 aa7.47□□□□□ -1.21
SNF8YPL002C MIP1P15801 1254 aa7.47□□□□□ -1.21
SNF8YPL002C DLD1P32891 587 aa7.47□□□□□ -1.21
SNF8YPL002C DFG5Q05031 458 aa7.47□□□□□ -1.21
SNF8YPL002C TY1A-BLQ12266 440 aa7.46□□□□□ -1.22
SNF8YPL002C YJR098CP47139 656 aa7.45□□□□□ -1.22
SNF8YPL002C SCW11P53189 542 aa7.45□□□□□ -1.22
SNF8YPL002C LSC2P53312 427 aa7.45□□□□□ -1.22
SNF8YPL002C GUT2P32191 649 aa7.44□□□□□ -1.22
SNF8YPL002C YIR007WP40566 764 aa7.43□□□□□ -1.22
SNF8YPL002C NAF1P53919 492 aaKnown RBP7.43□□□□□ -1.22
SNF8YPL002C FBP26P32604 452 aa7.42□□□□□ -1.22
SNF8YPL002C HPC2Q01448 625 aa7.42□□□□□ -1.22
SNF8YPL002C FRA1Q07825 749 aa7.41□□□□□ -1.22
SNF8YPL002C TCB1Q12466 1186 aa7.41□□□□□ -1.22
SNF8YPL002C UBP2Q01476 1272 aa7.4□□□□□ -1.22
SNF8YPL002C BDS1Q08347 646 aa7.4□□□□□ -1.22
SNF8YPL002C ATG2P53855 1592 aa7.39□□□□□ -1.23
SNF8YPL002C CSE4P36012 229 aa7.39□□□□□ -1.23
SNF8YPL002C TFB3Q03290 321 aa7.39□□□□□ -1.23
SNF8YPL002C STE20Q03497 939 aaKnown RBP7.39□□□□□ -1.23
SNF8YPL002C STE6P12866 1290 aa7.38□□□□□ -1.23
SNF8YPL002C ATG20Q07528 640 aa7.38□□□□□ -1.23
SNF8YPL002C PKC1P24583 1151 aa7.37□□□□□ -1.23
SNF8YPL002C YBL036CP38197 257 aa7.37□□□□□ -1.23
SNF8YPL002C ISF1P32488 338 aa7.36□□□□□ -1.23
SNF8YPL002C SKI3P17883 1432 aaKnown RBP7.35□□□□□ -1.23
SNF8YPL002C YDJ1P25491 409 aaKnown RBP7.35□□□□□ -1.23
SNF8YPL002C BRL1P38770 471 aa7.35□□□□□ -1.23
SNF8YPL002C ISU1Q03020 165 aa7.35□□□□□ -1.23
SNF8YPL002C MCM16Q12262 181 aa7.35□□□□□ -1.23
SNF8YPL002C OSH7P38755 437 aa7.34□□□□□ -1.23
SNF8YPL002C EMP47P43555 445 aa7.34□□□□□ -1.23
SNF8YPL002C SPT5P27692 1063 aaKnown RBP7.33□□□□□ -1.24
SNF8YPL002C ROG3P43602 733 aa7.33□□□□□ -1.24
SNF8YPL002C HPF1Q05164 967 aa7.33□□□□□ -1.24
SNF8YPL002C BIO2P32451 375 aa7.32□□□□□ -1.24
SNF8YPL002C APL6P46682 809 aa7.32□□□□□ -1.24
SNF8YPL002C YGR035CP53222 116 aa7.32□□□□□ -1.24
SNF8YPL002C YCF1P39109 1515 aaKnown RBP7.32□□□□□ -1.24
SNF8YPL002C TAF2P23255 1407 aa7.31□□□□□ -1.24
SNF8YPL002C TY1A-MR1Q04215 440 aa7.31□□□□□ -1.24
SNF8YPL002C CCP1P00431 361 aa7.3□□□□□ -1.24
SNF8YPL002C ISR1Q06098 443 aaKnown RBP7.3□□□□□ -1.24
SNF8YPL002C MRX12P47084 519 aa7.29□□□□□ -1.24
SNF8YPL002C TRK2P28584 889 aa7.28□□□□□ -1.24
SNF8YPL002C CDC19P00549 500 aaKnown RBP7.27□□□□□ -1.25
SNF8YPL002C NAM8Q00539 523 aaKnown RBP7.27□□□□□ -1.25
SNF8YPL002C HAL5P38970 855 aaKnown RBP7.26□□□□□ -1.25
SNF8YPL002C VTC4P47075 721 aa7.26□□□□□ -1.25
SNF8YPL002C SSK2P53599 1579 aa7.25□□□□□ -1.25
SNF8YPL002C DLD3P39976 496 aaKnown RBP7.25□□□□□ -1.25
SNF8YPL002C YNL108CP53929 270 aa7.25□□□□□ -1.25
SNF8YPL002C WTM2Q12206 467 aa7.25□□□□□ -1.25
SNF8YPL002C SUP45P12385 437 aaKnown RBP7.24□□□□□ -1.25
SNF8YPL002C ENO2P00925 437 aaKnown RBP7.23□□□□□ -1.25
SNF8YPL002C RPP2BP02400 110 aaKnown RBP7.23□□□□□ -1.25
SNF8YPL002C SPT2P06843 333 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms