RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W PAP2P53632 584 aaKnown RBP4.4□□□□□ -1.71
ABP140YOR239W LCD1Q04377 747 aa4.4□□□□□ -1.71
ABP140YOR239W HIF1Q12373 385 aa4.4□□□□□ -1.71
ABP140YOR239W RSC8P43609 557 aaKnown RBP4.39□□□□□ -1.71
ABP140YOR239W VPS30Q02948 557 aa4.39□□□□□ -1.71
ABP140YOR239W NHA1Q99271 985 aa4.39□□□□□ -1.71
ABP140YOR239W NUP157P40064 1391 aaKnown RBP4.39□□□□□ -1.71
ABP140YOR239W RAD3P06839 778 aa4.39□□□□□ -1.71
ABP140YOR239W PBS2P08018 668 aa4.39□□□□□ -1.71
ABP140YOR239W SWH1P35845 1188 aa4.39□□□□□ -1.71
ABP140YOR239W YNL050CP53952 270 aa4.39□□□□□ -1.71
ABP140YOR239W UTP13Q05946 817 aaKnown RBP4.39□□□□□ -1.71
ABP140YOR239W CHL1P22516 861 aaPredicted RBP4.38□□□□□ -1.71
ABP140YOR239W ZUO1P32527 433 aaKnown RBP4.38□□□□□ -1.71
ABP140YOR239W UBP14P38237 781 aaKnown RBP4.38□□□□□ -1.71
ABP140YOR239W ALD3P54114 506 aa4.38□□□□□ -1.71
ABP140YOR239W ESP1Q03018 1630 aa4.38□□□□□ -1.71
ABP140YOR239W SPT16P32558 1035 aaKnown RBP4.37□□□□□ -1.71
ABP140YOR239W PXR1P53335 271 aaPredicted RBP4.37□□□□□ -1.71
ABP140YOR239W MRS2Q01926 470 aa4.37□□□□□ -1.71
ABP140YOR239W YDR090CQ03193 310 aa4.37□□□□□ -1.71
ABP140YOR239W PDS5Q04264 1277 aa4.37□□□□□ -1.71
ABP140YOR239W YLL054CQ12244 843 aa4.37□□□□□ -1.71
ABP140YOR239W SEC39Q12745 709 aa4.37□□□□□ -1.71
ABP140YOR239W SNQ2P32568 1501 aaKnown RBP4.37□□□□□ -1.71
ABP140YOR239W KAR3P17119 729 aa4.37□□□□□ -1.71
ABP140YOR239W SPB4P25808 606 aaPredicted RBP4.37□□□□□ -1.71
ABP140YOR239W RPC82P32349 654 aa4.37□□□□□ -1.71
ABP140YOR239W SAP30P38429 201 aa4.37□□□□□ -1.71
ABP140YOR239W YMR124WP39523 943 aaKnown RBP4.37□□□□□ -1.71
ABP140YOR239W PEA2P40091 420 aa4.37□□□□□ -1.71
ABP140YOR239W VID30P53076 958 aa4.37□□□□□ -1.71
ABP140YOR239W YGL140CP53120 1219 aa4.37□□□□□ -1.71
ABP140YOR239W HAP5Q02516 242 aa4.37□□□□□ -1.71
ABP140YOR239W YMR102CQ03177 834 aa4.37□□□□□ -1.71
ABP140YOR239W MDM38Q08179 573 aa4.37□□□□□ -1.71
ABP140YOR239W PUS1Q12211 544 aaKnown RBP4.37□□□□□ -1.71
ABP140YOR239W PDR5P33302 1511 aaKnown RBP4.36□□□□□ -1.71
ABP140YOR239W SPT5P27692 1063 aaKnown RBP4.36□□□□□ -1.71
ABP140YOR239W MCM2P29469 868 aa4.36□□□□□ -1.71
ABP140YOR239W PSE1P32337 1089 aaKnown RBP4.36□□□□□ -1.71
ABP140YOR239W TOA1P32773 286 aa4.36□□□□□ -1.71
ABP140YOR239W REF2P42073 533 aaPredicted RBP4.36□□□□□ -1.71
ABP140YOR239W STU2P46675 888 aa4.36□□□□□ -1.71
ABP140YOR239W NUP42P49686 430 aaKnown RBP4.36□□□□□ -1.71
ABP140YOR239W COG8Q04632 607 aa4.36□□□□□ -1.71
ABP140YOR239W SML1Q04964 104 aa4.36□□□□□ -1.71
ABP140YOR239W ORM2Q06144 216 aa4.36□□□□□ -1.71
ABP140YOR239W SFI1Q12369 946 aa4.36□□□□□ -1.71
ABP140YOR239W ESC1Q03661 1658 aaKnown RBP4.36□□□□□ -1.71
ABP140YOR239W SSA1P10591 642 aaKnown RBP4.35□□□□□ -1.71
ABP140YOR239W SSA2P10592 639 aaKnown RBP4.35□□□□□ -1.71
ABP140YOR239W RKM3P38222 552 aa4.35□□□□□ -1.71
ABP140YOR239W RTT107P38850 1070 aa4.35□□□□□ -1.71
ABP140YOR239W BDP1P46678 594 aa4.35□□□□□ -1.71
ABP140YOR239W ITC1P53125 1264 aa4.35□□□□□ -1.71
ABP140YOR239W ITT1Q04638 464 aa4.35□□□□□ -1.71
ABP140YOR239W BNI1P41832 1953 aa4.35□□□□□ -1.71
ABP140YOR239W TY1B-AO13527 1196 aaKnown RBP4.35□□□□□ -1.71
ABP140YOR239W SUP35P05453 685 aaKnown RBP4.35□□□□□ -1.71
ABP140YOR239W CEP3P40969 608 aa4.35□□□□□ -1.71
ABP140YOR239W NDL1Q06568 189 aa4.35□□□□□ -1.71
ABP140YOR239W PSO2P30620 661 aa4.34□□□□□ -1.71
ABP140YOR239W GUT1P32190 709 aa4.34□□□□□ -1.71
ABP140YOR239W PUP2P32379 260 aa4.34□□□□□ -1.71
ABP140YOR239W CDC11P32458 415 aa4.34□□□□□ -1.71
ABP140YOR239W RIO2P40160 425 aaKnown RBP4.34□□□□□ -1.71
ABP140YOR239W NDC80P40460 691 aa4.34□□□□□ -1.71
ABP140YOR239W YLR326WQ06170 240 aaKnown RBP4.34□□□□□ -1.71
ABP140YOR239W YOR389WQ08912 624 aa4.34□□□□□ -1.71
ABP140YOR239W LTE1P07866 1435 aa4.33□□□□□ -1.72
ABP140YOR239W COX6P00427 148 aa4.33□□□□□ -1.72
ABP140YOR239W MSH1P25846 959 aa4.33□□□□□ -1.72
ABP140YOR239W PRE3P38624 215 aa4.33□□□□□ -1.72
ABP140YOR239W LEM3P42838 414 aa4.33□□□□□ -1.72
ABP140YOR239W GRE2Q12068 342 aaKnown RBP4.33□□□□□ -1.72
ABP140YOR239W NFI1Q12216 726 aa4.33□□□□□ -1.72
ABP140YOR239W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
ABP140YOR239W CDC25P04821 1589 aa4.33□□□□□ -1.72
ABP140YOR239W YOR1P53049 1477 aa4.33□□□□□ -1.72
ABP140YOR239W MET5P47169 1442 aa4.33□□□□□ -1.72
ABP140YOR239W MCM1P11746 286 aa4.32□□□□□ -1.72
ABP140YOR239W DIT2P21595 489 aa4.32□□□□□ -1.72
ABP140YOR239W PBY1P38254 753 aa4.32□□□□□ -1.72
ABP140YOR239W IAH1P41734 238 aa4.32□□□□□ -1.72
ABP140YOR239W YGR273CP53329 174 aa4.32□□□□□ -1.72
ABP140YOR239W YDL129WQ07555 291 aa4.32□□□□□ -1.72
ABP140YOR239W MIC60P36112 540 aa4.32□□□□□ -1.72
ABP140YOR239W VPS41P38959 992 aa4.32□□□□□ -1.72
ABP140YOR239W MPP10P47083 593 aaKnown RBP4.32□□□□□ -1.72
ABP140YOR239W JIP4Q03361 876 aa4.32□□□□□ -1.72
ABP140YOR239W GEA2P39993 1459 aaKnown RBP4.31□□□□□ -1.72
ABP140YOR239W ILV3P39522 585 aaKnown RBP4.31□□□□□ -1.72
ABP140YOR239W VHR2P40041 505 aa4.31□□□□□ -1.72
ABP140YOR239W AIM20P40451 204 aa4.31□□□□□ -1.72
ABP140YOR239W SUB1P54000 292 aaKnown RBP4.31□□□□□ -1.72
ABP140YOR239W GGA1Q06336 557 aa4.31□□□□□ -1.72
ABP140YOR239W PEX19Q07418 342 aa4.31□□□□□ -1.72
ABP140YOR239W GYP5Q12344 894 aa4.31□□□□□ -1.72
ABP140YOR239W DNF1P32660 1571 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms