RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W RVS167P39743 482 aaKnown RBP7.03□□□□□ -1.28
VPS5YOR069W TYS1P36421 394 aaKnown RBP7.03□□□□□ -1.28
VPS5YOR069W TCD1P38756 429 aa7.03□□□□□ -1.28
VPS5YOR069W CAB1Q04430 367 aa7.03□□□□□ -1.28
VPS5YOR069W DNF3Q12674 1656 aa7.03□□□□□ -1.28
VPS5YOR069W PSK1P31374 1356 aa7.02□□□□□ -1.29
VPS5YOR069W BRN1P38170 754 aa7.02□□□□□ -1.29
VPS5YOR069W HST1P53685 503 aa7.02□□□□□ -1.29
VPS5YOR069W RFC1P38630 861 aaKnown RBP7.01□□□□□ -1.29
VPS5YOR069W RSM25P40496 264 aa7.01□□□□□ -1.29
VPS5YOR069W VPS20Q04272 221 aa7.01□□□□□ -1.29
VPS5YOR069W TAP42Q04372 366 aa7.01□□□□□ -1.29
VPS5YOR069W NOP53Q12080 455 aaKnown RBP7.01□□□□□ -1.29
VPS5YOR069W LTV1P34078 463 aa7.01□□□□□ -1.29
VPS5YOR069W RNA1P11745 407 aaKnown RBP7□□□□□ -1.29
VPS5YOR069W KRE33P53914 1056 aaKnown RBP7□□□□□ -1.29
VPS5YOR069W HRQ1Q05549 1077 aa7□□□□□ -1.29
VPS5YOR069W STU2P46675 888 aa7□□□□□ -1.29
VPS5YOR069W KEX1P09620 729 aa6.99□□□□□ -1.29
VPS5YOR069W BIK1P11709 440 aa6.99□□□□□ -1.29
VPS5YOR069W CYC8P14922 966 aa6.99□□□□□ -1.29
VPS5YOR069W PDI1P17967 522 aaKnown RBP6.99□□□□□ -1.29
VPS5YOR069W HXT13P39924 564 aa6.99□□□□□ -1.29
VPS5YOR069W APC11Q12157 165 aa6.99□□□□□ -1.29
VPS5YOR069W CLB5P30283 435 aa6.98□□□□□ -1.29
VPS5YOR069W YNG2P38806 282 aaKnown RBP6.98□□□□□ -1.29
VPS5YOR069W CIN4P39110 191 aa6.98□□□□□ -1.29
VPS5YOR069W SFI1Q12369 946 aa6.98□□□□□ -1.29
VPS5YOR069W RNR2P09938 399 aaKnown RBP6.98□□□□□ -1.29
VPS5YOR069W IPL1P38991 367 aa6.98□□□□□ -1.29
VPS5YOR069W AUS1Q08409 1394 aa6.97□□□□□ -1.29
VPS5YOR069W NMD2P38798 1089 aaKnown RBP6.97□□□□□ -1.29
VPS5YOR069W HYR1P40581 163 aaKnown RBP6.97□□□□□ -1.29
VPS5YOR069W KRI1P42846 591 aaKnown RBP6.97□□□□□ -1.29
VPS5YOR069W SPO1P53541 631 aa6.97□□□□□ -1.29
VPS5YOR069W HXT17P53631 564 aa6.97□□□□□ -1.29
VPS5YOR069W VPS60Q03390 229 aa6.97□□□□□ -1.29
VPS5YOR069W DID4P36108 232 aa6.96□□□□□ -1.29
VPS5YOR069W CWH41P53008 833 aa6.96□□□□□ -1.29
VPS5YOR069W PBY1P38254 753 aa6.96□□□□□ -1.3
VPS5YOR069W CWC22P53333 577 aaKnown RBP6.96□□□□□ -1.3
VPS5YOR069W TIM50Q02776 476 aa6.96□□□□□ -1.3
VPS5YOR069W GRX4P32642 244 aa6.95□□□□□ -1.3
VPS5YOR069W MFT1P33441 392 aaKnown RBP6.95□□□□□ -1.3
VPS5YOR069W MRPL10P36520 322 aa6.95□□□□□ -1.3
VPS5YOR069W GYP7P48365 746 aa6.95□□□□□ -1.3
VPS5YOR069W RTF1P53064 558 aa6.95□□□□□ -1.3
VPS5YOR069W CSI1Q04368 295 aa6.95□□□□□ -1.3
VPS5YOR069W FPR4Q06205 392 aaPredicted RBP6.95□□□□□ -1.3
VPS5YOR069W MPE1P35728 441 aaKnown RBP6.94□□□□□ -1.3
VPS5YOR069W RIX1P38883 763 aaPredicted RBP6.94□□□□□ -1.3
VPS5YOR069W CEP3P40969 608 aa6.94□□□□□ -1.3
VPS5YOR069W RCM1P53972 490 aa6.94□□□□□ -1.3
VPS5YOR069W NOP14Q99207 810 aaKnown RBP6.94□□□□□ -1.3
VPS5YOR069W SPB4P25808 606 aaPredicted RBP6.94□□□□□ -1.3
VPS5YOR069W DEP1P31385 405 aa6.94□□□□□ -1.3
VPS5YOR069W UTP13Q05946 817 aaKnown RBP6.94□□□□□ -1.3
VPS5YOR069W LYS2P07702 1392 aa6.94□□□□□ -1.3
VPS5YOR069W TRL1P09880 827 aaKnown RBP6.93□□□□□ -1.3
VPS5YOR069W CLB1P24868 471 aa6.93□□□□□ -1.3
VPS5YOR069W PPH3P32345 308 aa6.93□□□□□ -1.3
VPS5YOR069W SRT1Q03175 343 aa6.93□□□□□ -1.3
VPS5YOR069W VAS1P07806 1104 aaKnown RBP6.93□□□□□ -1.3
VPS5YOR069W NUG1P40010 520 aaKnown RBP6.93□□□□□ -1.3
VPS5YOR069W DSD1P53095 428 aa6.93□□□□□ -1.3
VPS5YOR069W SSL2Q00578 843 aa6.93□□□□□ -1.3
VPS5YOR069W LEU2P04173 364 aaPredicted RBP6.92□□□□□ -1.3
VPS5YOR069W MNR2P35724 969 aa6.92□□□□□ -1.3
VPS5YOR069W MRX12P47084 519 aa6.92□□□□□ -1.3
VPS5YOR069W PEX19Q07418 342 aa6.92□□□□□ -1.3
VPS5YOR069W TAF13P11747 167 aa6.91□□□□□ -1.3
VPS5YOR069W SES1P07284 462 aaKnown RBP6.91□□□□□ -1.3
VPS5YOR069W CDC16P09798 840 aa6.91□□□□□ -1.3
VPS5YOR069W YBR287WP38355 427 aa6.91□□□□□ -1.3
VPS5YOR069W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
VPS5YOR069W RPS0BP46654 252 aaKnown RBP6.91□□□□□ -1.3
VPS5YOR069W ZDS1P50111 915 aaKnown RBP6.91□□□□□ -1.3
VPS5YOR069W RPO41P13433 1351 aaKnown RBP6.91□□□□□ -1.3
VPS5YOR069W USO1P25386 1790 aa6.9□□□□□ -1.3
VPS5YOR069W RPS19AP07280 144 aaKnown RBP6.9□□□□□ -1.3
VPS5YOR069W RPS19BP07281 144 aaPredicted RBP6.9□□□□□ -1.3
VPS5YOR069W DSN1P40568 576 aa6.9□□□□□ -1.3
VPS5YOR069W AKL1P38080 1108 aaKnown RBP6.89□□□□□ -1.31
VPS5YOR069W CCT5P40413 562 aaKnown RBP6.89□□□□□ -1.31
VPS5YOR069W YNL050CP53952 270 aa6.89□□□□□ -1.31
VPS5YOR069W RNT1Q02555 471 aa6.89□□□□□ -1.31
VPS5YOR069W SWE1P32944 819 aa6.89□□□□□ -1.31
VPS5YOR069W NPR3P38742 1146 aa6.89□□□□□ -1.31
VPS5YOR069W GAS4Q08271 471 aa6.89□□□□□ -1.31
VPS5YOR069W ELM1P32801 640 aa6.88□□□□□ -1.31
VPS5YOR069W MED8P38304 223 aa6.88□□□□□ -1.31
VPS5YOR069W ECM1P39715 212 aa6.88□□□□□ -1.31
VPS5YOR069W MAM1P40065 302 aa6.88□□□□□ -1.31
VPS5YOR069W ENV11P53246 860 aa6.88□□□□□ -1.31
VPS5YOR069W SPC110P32380 944 aa6.88□□□□□ -1.31
VPS5YOR069W MTR4P47047 1073 aaKnown RBP6.88□□□□□ -1.31
VPS5YOR069W TRS33Q99394 268 aa6.88□□□□□ -1.31
VPS5YOR069W RPL19AP0CX82 189 aaKnown RBP6.87□□□□□ -1.31
VPS5YOR069W RPL19BP0CX83 189 aaPredicted RBP6.87□□□□□ -1.31
VPS5YOR069W ATE1P16639 503 aa6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms