RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE5YOR042W YJL171CP46992 396 aa7.18□□□□□ -1.26
CUE5YOR042W PEX21P50091 288 aa7.18□□□□□ -1.26
CUE5YOR042W SSM4P40318 1319 aa7.18□□□□□ -1.26
CUE5YOR042W KIN1P13185 1064 aa7.17□□□□□ -1.26
CUE5YOR042W GCN2P15442 1659 aa7.16□□□□□ -1.26
CUE5YOR042W NMA111P53920 997 aa7.16□□□□□ -1.26
CUE5YOR042W BNR1P40450 1375 aa7.16□□□□□ -1.26
CUE5YOR042W TFB4Q12004 338 aa7.15□□□□□ -1.26
CUE5YOR042W ISU2Q12056 156 aa7.15□□□□□ -1.26
CUE5YOR042W BMT6Q12291 365 aa7.15□□□□□ -1.26
CUE5YOR042W TEA1P47988 759 aa7.14□□□□□ -1.27
CUE5YOR042W NUP188P52593 1655 aaKnown RBP7.13□□□□□ -1.27
CUE5YOR042W YPR109WQ06104 294 aa7.13□□□□□ -1.27
CUE5YOR042W CLB5P30283 435 aa7.12□□□□□ -1.27
CUE5YOR042W TUM1Q08686 304 aaKnown RBP7.12□□□□□ -1.27
CUE5YOR042W DNF3Q12674 1656 aa7.12□□□□□ -1.27
CUE5YOR042W VMR1P38735 1592 aa7.12□□□□□ -1.27
CUE5YOR042W ARH1P48360 493 aa7.11□□□□□ -1.27
CUE5YOR042W HAP5Q02516 242 aa7.11□□□□□ -1.27
CUE5YOR042W ELP4Q02884 456 aaKnown RBP7.1□□□□□ -1.27
CUE5YOR042W YRR1Q12172 810 aa7.1□□□□□ -1.27
CUE5YOR042W PDR5P33302 1511 aaKnown RBP7.08□□□□□ -1.28
CUE5YOR042W YDR344CQ05510 147 aa7.08□□□□□ -1.28
CUE5YOR042W BUD21Q08492 214 aaPredicted RBP7.07□□□□□ -1.28
CUE5YOR042W IML1P47170 1584 aa7.05□□□□□ -1.28
CUE5YOR042W SPT23P35210 1082 aa7.04□□□□□ -1.28
CUE5YOR042W PRE3P38624 215 aa7.04□□□□□ -1.28
CUE5YOR042W GUA1P38625 525 aaKnown RBP7.03□□□□□ -1.28
CUE5YOR042W BNI4P53858 892 aa7.03□□□□□ -1.28
CUE5YOR042W NIS1P53939 407 aa7.03□□□□□ -1.28
CUE5YOR042W PDR1P12383 1068 aa7.02□□□□□ -1.29
CUE5YOR042W CHL1P22516 861 aaPredicted RBP7.02□□□□□ -1.29
CUE5YOR042W CSN12P47130 423 aa7.02□□□□□ -1.29
CUE5YOR042W YMR196WQ04336 1088 aa7.02□□□□□ -1.29
CUE5YOR042W PTC2P39966 464 aaKnown RBP7.01□□□□□ -1.29
CUE5YOR042W DMA2P53924 522 aa7.01□□□□□ -1.29
CUE5YOR042W NUD1P32336 851 aa7□□□□□ -1.29
CUE5YOR042W FPK1P53739 893 aa7□□□□□ -1.29
CUE5YOR042W NPL4P33755 580 aa6.99□□□□□ -1.29
CUE5YOR042W HAP1P0CE41 1502 aa6.99□□□□□ -1.29
CUE5YOR042W SSA2P10592 639 aaKnown RBP6.98□□□□□ -1.29
CUE5YOR042W USO1P25386 1790 aa6.97□□□□□ -1.29
CUE5YOR042W SIT4P20604 311 aa6.97□□□□□ -1.29
CUE5YOR042W GLN1P32288 370 aaKnown RBP6.97□□□□□ -1.29
CUE5YOR042W HST2P53686 357 aa6.97□□□□□ -1.29
CUE5YOR042W TYW1Q08960 810 aaKnown RBP6.97□□□□□ -1.29
CUE5YOR042W HGH1P48362 394 aaKnown RBP6.96□□□□□ -1.3
CUE5YOR042W HPC2Q01448 625 aa6.96□□□□□ -1.3
CUE5YOR042W PDR11P40550 1411 aa6.95□□□□□ -1.3
CUE5YOR042W RAM1P22007 431 aa6.95□□□□□ -1.3
CUE5YOR042W YAP3P38749 330 aa6.95□□□□□ -1.3
CUE5YOR042W YML082WQ04533 649 aaKnown RBP6.95□□□□□ -1.3
CUE5YOR042W MMP1Q12372 583 aa6.95□□□□□ -1.3
CUE5YOR042W KEX2P13134 814 aa6.94□□□□□ -1.3
CUE5YOR042W SCJ1P25303 377 aa6.94□□□□□ -1.3
CUE5YOR042W KTR1P27810 393 aaKnown RBP6.94□□□□□ -1.3
CUE5YOR042W STR2P47164 639 aa6.94□□□□□ -1.3
CUE5YOR042W ISM1P48526 1002 aa6.94□□□□□ -1.3
CUE5YOR042W RTF1P53064 558 aa6.93□□□□□ -1.3
CUE5YOR042W YNL115CP53925 644 aa6.93□□□□□ -1.3
CUE5YOR042W URN1Q06525 465 aaKnown RBP6.93□□□□□ -1.3
CUE5YOR042W NUP192P47054 1683 aa6.93□□□□□ -1.3
CUE5YOR042W SLY41P22215 453 aa6.92□□□□□ -1.3
CUE5YOR042W GCD11P32481 527 aaKnown RBP6.92□□□□□ -1.3
CUE5YOR042W ESS1P22696 170 aa6.91□□□□□ -1.3
CUE5YOR042W BRL1P38770 471 aa6.91□□□□□ -1.3
CUE5YOR042W IPL1P38991 367 aa6.91□□□□□ -1.3
CUE5YOR042W TFB3Q03290 321 aa6.91□□□□□ -1.3
CUE5YOR042W ERF2Q06551 359 aa6.91□□□□□ -1.3
CUE5YOR042W YPR015CQ12531 247 aa6.91□□□□□ -1.3
CUE5YOR042W PKH3Q03306 898 aaPredicted RBP6.9□□□□□ -1.3
CUE5YOR042W BUD20Q08004 166 aaPredicted RBP6.9□□□□□ -1.3
CUE5YOR042W RAV1P47104 1357 aa6.9□□□□□ -1.31
CUE5YOR042W TYS1P36421 394 aaKnown RBP6.89□□□□□ -1.31
CUE5YOR042W TY1B-NL2Q99337 1749 aaKnown RBP6.89□□□□□ -1.31
CUE5YOR042W PRT1P06103 763 aaKnown RBP6.87□□□□□ -1.31
CUE5YOR042W YJU3P28321 313 aa6.87□□□□□ -1.31
CUE5YOR042W TY1A-DR4O74302 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-HP0C2I4 478 aaKnown RBP6.86□□□□□ -1.31
CUE5YOR042W TY1A-AP0CX57 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-PR1P0CX58 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-ORP0CX59 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-PR2P0CX60 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-DR5P0CX65 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-ER2P0CX66 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-GR3P0CX67 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-LR1P0CX68 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-MR2P0CX69 440 aa6.86□□□□□ -1.31
CUE5YOR042W SEC2P17065 759 aa6.86□□□□□ -1.31
CUE5YOR042W VRP1P37370 817 aa6.86□□□□□ -1.31
CUE5YOR042W PAF1P38351 445 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-JR2P47099 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-DR1Q03856 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-ML1Q04706 440 aaKnown RBP6.86□□□□□ -1.31
CUE5YOR042W TY1A-BRQ12217 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-NL2Q12470 440 aa6.86□□□□□ -1.31
CUE5YOR042W TY1A-GR2Q12485 440 aa6.86□□□□□ -1.31
CUE5YOR042W NOP7P53261 605 aaKnown RBP6.85□□□□□ -1.31
CUE5YOR042W GYP1Q08484 637 aa6.85□□□□□ -1.31
CUE5YOR042W RAD59Q12223 238 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms