RNA–Protein interactions for RNA: YNL116W

DMA2, Transcript of Ubiquitin-protein ligase (E3), yeast

Gene DMA2, Length 1,569 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DMA2	YNL116W	HOS3	Q02959	697 aa	Known RBP	10.27	□□□□□ -0.76
DMA2	YNL116W	CAB1	Q04430	367 aa		10.27	□□□□□ -0.76
DMA2	YNL116W	URN1	Q06525	465 aa	Known RBP	10.27	□□□□□ -0.76
DMA2	YNL116W	PDI1	P17967	522 aa	Known RBP	10.26	□□□□□ -0.77
DMA2	YNL116W	RVS167	P39743	482 aa	Known RBP	10.26	□□□□□ -0.77
DMA2	YNL116W	RAD26	P40352	1085 aa		10.26	□□□□□ -0.77
DMA2	YNL116W	RSM25	P40496	264 aa		10.26	□□□□□ -0.77
DMA2	YNL116W	HIM1	Q06674	414 aa		10.26	□□□□□ -0.77
DMA2	YNL116W	IPL1	P38991	367 aa		10.26	□□□□□ -0.77
DMA2	YNL116W	NPA3	P47122	385 aa		10.26	□□□□□ -0.77
DMA2	YNL116W	NOP53	Q12080	455 aa	Known RBP	10.25	□□□□□ -0.77
DMA2	YNL116W	KEX1	P09620	729 aa		10.24	□□□□□ -0.77
DMA2	YNL116W	GRX4	P32642	244 aa		10.24	□□□□□ -0.77
DMA2	YNL116W	STU2	P46675	888 aa		10.24	□□□□□ -0.77
DMA2	YNL116W	AVT3	P36062	692 aa		10.23	□□□□□ -0.77
DMA2	YNL116W	BRN1	P38170	754 aa		10.23	□□□□□ -0.77
DMA2	YNL116W	RFC1	P38630	861 aa	Known RBP	10.23	□□□□□ -0.77
DMA2	YNL116W	HYR1	P40581	163 aa	Known RBP	10.23	□□□□□ -0.77
DMA2	YNL116W	KRE33	P53914	1056 aa	Known RBP	10.23	□□□□□ -0.77
DMA2	YNL116W	PSK1	P31374	1356 aa		10.23	□□□□□ -0.77
DMA2	YNL116W	BIK1	P11709	440 aa		10.22	□□□□□ -0.77
DMA2	YNL116W	KRI1	P42846	591 aa	Known RBP	10.22	□□□□□ -0.77
DMA2	YNL116W	VPS20	Q04272	221 aa		10.22	□□□□□ -0.77
DMA2	YNL116W	RNR2	P09938	399 aa	Known RBP	10.22	□□□□□ -0.77
DMA2	YNL116W	LTV1	P34078	463 aa		10.22	□□□□□ -0.77
DMA2	YNL116W	ILV3	P39522	585 aa	Known RBP	10.22	□□□□□ -0.77
DMA2	YNL116W	RTF1	P53064	558 aa		10.22	□□□□□ -0.77
DMA2	YNL116W	YGL081W	P53156	320 aa		10.22	□□□□□ -0.77
DMA2	YNL116W	HRQ1	Q05549	1077 aa		10.22	□□□□□ -0.77
DMA2	YNL116W	CYC8	P14922	966 aa		10.21	□□□□□ -0.78
DMA2	YNL116W	YNG2	P38806	282 aa	Known RBP	10.21	□□□□□ -0.78
DMA2	YNL116W	AUS1	Q08409	1394 aa		10.2	□□□□□ -0.78
DMA2	YNL116W	SPT21	P35209	758 aa		10.2	□□□□□ -0.78
DMA2	YNL116W	RIX1	P38883	763 aa	Predicted RBP	10.2	□□□□□ -0.78
DMA2	YNL116W	CIN4	P39110	191 aa		10.2	□□□□□ -0.78
DMA2	YNL116W	NMD2	P38798	1089 aa	Known RBP	10.19	□□□□□ -0.78
DMA2	YNL116W	GYP7	P48365	746 aa		10.19	□□□□□ -0.78
DMA2	YNL116W	RNA1	P11745	407 aa	Known RBP	10.18	□□□□□ -0.78
DMA2	YNL116W	HXT13	P39924	564 aa		10.18	□□□□□ -0.78
DMA2	YNL116W	VPS60	Q03390	229 aa		10.18	□□□□□ -0.78
DMA2	YNL116W	TAF13	P11747	167 aa		10.18	□□□□□ -0.78
DMA2	YNL116W	MPE1	P35728	441 aa	Known RBP	10.18	□□□□□ -0.78
DMA2	YNL116W	PBY1	P38254	753 aa		10.18	□□□□□ -0.78
DMA2	YNL116W	SFI1	Q12369	946 aa		10.18	□□□□□ -0.78
DMA2	YNL116W	CEP3	P40969	608 aa		10.17	□□□□□ -0.78
DMA2	YNL116W	SPO1	P53541	631 aa		10.17	□□□□□ -0.78
DMA2	YNL116W	MAK10	Q02197	733 aa		10.17	□□□□□ -0.78
DMA2	YNL116W	APC11	Q12157	165 aa		10.17	□□□□□ -0.78
DMA2	YNL116W	LYS2	P07702	1392 aa		10.16	□□□□□ -0.78
DMA2	YNL116W	LEU2	P04173	364 aa	Predicted RBP	10.16	□□□□□ -0.78
DMA2	YNL116W	MRPL10	P36520	322 aa		10.15	□□□□□ -0.78
DMA2	YNL116W	CWH41	P53008	833 aa		10.15	□□□□□ -0.78
DMA2	YNL116W	RCM1	P53972	490 aa		10.15	□□□□□ -0.78
DMA2	YNL116W	CSI1	Q04368	295 aa		10.15	□□□□□ -0.78
DMA2	YNL116W	RPO41	P13433	1351 aa	Known RBP	10.15	□□□□□ -0.78
DMA2	YNL116W	HXT17	P53631	564 aa		10.14	□□□□□ -0.79
DMA2	YNL116W	DSD1	P53095	428 aa		10.14	□□□□□ -0.79
DMA2	YNL116W	SRT1	Q03175	343 aa		10.14	□□□□□ -0.79
DMA2	YNL116W	CDC16	P09798	840 aa		10.13	□□□□□ -0.79
DMA2	YNL116W	PPH3	P32345	308 aa		10.13	□□□□□ -0.79
DMA2	YNL116W	DID4	P36108	232 aa		10.13	□□□□□ -0.79
DMA2	YNL116W	MAM1	P40065	302 aa		10.13	□□□□□ -0.79
DMA2	YNL116W	ZDS1	P50111	915 aa	Known RBP	10.13	□□□□□ -0.79
DMA2	YNL116W	YNL050C	P53952	270 aa		10.13	□□□□□ -0.79
DMA2	YNL116W	NOP14	Q99207	810 aa	Known RBP	10.13	□□□□□ -0.79
DMA2	YNL116W	RPS19A	P07280	144 aa	Known RBP	10.12	□□□□□ -0.79
DMA2	YNL116W	RPS19B	P07281	144 aa	Predicted RBP	10.12	□□□□□ -0.79
DMA2	YNL116W	VAS1	P07806	1104 aa	Known RBP	10.12	□□□□□ -0.79
DMA2	YNL116W	TRL1	P09880	827 aa	Known RBP	10.12	□□□□□ -0.79
DMA2	YNL116W	CLB5	P30283	435 aa		10.12	□□□□□ -0.79
DMA2	YNL116W	TIM50	Q02776	476 aa		10.12	□□□□□ -0.79
DMA2	YNL116W	USO1	P25386	1790 aa		10.12	□□□□□ -0.79
DMA2	YNL116W	MTR4	P47047	1073 aa	Known RBP	10.11	□□□□□ -0.79
DMA2	YNL116W	PEX19	Q07418	342 aa		10.11	□□□□□ -0.79
DMA2	YNL116W	DEP1	P31385	405 aa		10.1	□□□□□ -0.79
DMA2	YNL116W	AKL1	P38080	1108 aa	Known RBP	10.1	□□□□□ -0.79
DMA2	YNL116W	FPR4	Q06205	392 aa	Predicted RBP	10.1	□□□□□ -0.79
DMA2	YNL116W	ETT1	Q08421	412 aa	Known RBP	10.1	□□□□□ -0.79
DMA2	YNL116W	TY1B-NL2	Q99337	1749 aa	Known RBP	10.1	□□□□□ -0.79
DMA2	YNL116W	CLB1	P24868	471 aa		10.09	□□□□□ -0.79
DMA2	YNL116W	ELM1	P32801	640 aa		10.09	□□□□□ -0.79
DMA2	YNL116W	MFT1	P33441	392 aa	Known RBP	10.09	□□□□□ -0.79
DMA2	YNL116W	MRX12	P47084	519 aa		10.09	□□□□□ -0.79
DMA2	YNL116W	CCT5	P40413	562 aa	Known RBP	10.09	□□□□□ -0.79
DMA2	YNL116W	NUG1	P40010	520 aa	Known RBP	10.08	□□□□□ -0.8
DMA2	YNL116W	RNT1	Q02555	471 aa		10.08	□□□□□ -0.8
DMA2	YNL116W	UTP13	Q05946	817 aa	Known RBP	10.08	□□□□□ -0.8
DMA2	YNL116W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	10.07	□□□□□ -0.8	not detected
DMA2	YNL116W	SPB4	P25808	606 aa	Predicted RBP	10.05	□□□□□ -0.8
DMA2	YNL116W	MNR2	P35724	969 aa		10.05	□□□□□ -0.8
DMA2	YNL116W	NPR3	P38742	1146 aa		10.05	□□□□□ -0.8
DMA2	YNL116W	RPS0B	P46654	252 aa	Known RBP	10.05	□□□□□ -0.8
DMA2	YNL116W	SES1	P07284	462 aa	Known RBP	10.05	□□□□□ -0.8
DMA2	YNL116W	RPL19A	P0CX82	189 aa	Known RBP	10.05	□□□□□ -0.8
DMA2	YNL116W	RPL19B	P0CX83	189 aa	Predicted RBP	10.05	□□□□□ -0.8
DMA2	YNL116W	GCD7	P32502	381 aa	Predicted RBP	10.05	□□□□□ -0.8
DMA2	YNL116W	YBR287W	P38355	427 aa		10.05	□□□□□ -0.8
DMA2	YNL116W	PEX14	P53112	341 aa		10.05	□□□□□ -0.8
DMA2	YNL116W	GAS4	Q08271	471 aa		10.05	□□□□□ -0.8
DMA2	YNL116W	MRC1	P25588	1096 aa		10.04	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms