RNA–Protein interactions for RNA: YLR224W

YLR224W, Transcript of F-box protein and component of SCF ubiquitin ligase complexes, yeast

Gene YLR224W, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR224W	YLR224W	MSB3	P48566	633 aa	Predicted RBP	6.06	□□□□□ -1.44
YLR224W	YLR224W	YDR444W	Q04093	687 aa		6.06	□□□□□ -1.44
YLR224W	YLR224W	YPR084W	Q06821	456 aa		6.05	□□□□□ -1.44
YLR224W	YLR224W	UGA3	P26370	528 aa		6.04	□□□□□ -1.44
YLR224W	YLR224W	PTK2	P47116	818 aa	Known RBP	6.04	□□□□□ -1.44
YLR224W	YLR224W	LCB5	Q06147	687 aa	Known RBP	6.04	□□□□□ -1.44
YLR224W	YLR224W	YDL176W	Q12027	708 aa		6.04	□□□□□ -1.44
YLR224W	YLR224W	YBL086C	P38177	466 aa		6.02	□□□□□ -1.45
YLR224W	YLR224W	PKC1	P24583	1151 aa		6.01	□□□□□ -1.45
YLR224W	YLR224W	EMW1	P42842	904 aa	Known RBP	6.01	□□□□□ -1.45
YLR224W	YLR224W	MAK16	P10962	306 aa	Predicted RBP	6	□□□□□ -1.45
YLR224W	YLR224W	OPT2	Q06593	877 aa		6	□□□□□ -1.45
YLR224W	YLR224W	SSA2	P10592	639 aa	Known RBP	5.99	□□□□□ -1.45
YLR224W	YLR224W	TEC1	P18412	486 aa		5.98	□□□□□ -1.45
YLR224W	YLR224W	TFB3	Q03290	321 aa		5.97	□□□□□ -1.45
YLR224W	YLR224W	YDJ1	P25491	409 aa	Known RBP	5.96	□□□□□ -1.46
YLR224W	YLR224W	DLD1	P32891	587 aa		5.96	□□□□□ -1.46
YLR224W	YLR224W	AAD14	P42884	376 aa		5.96	□□□□□ -1.46
YLR224W	YLR224W	DFG5	Q05031	458 aa		5.96	□□□□□ -1.46
YLR224W	YLR224W	ISF1	P32488	338 aa		5.95	□□□□□ -1.46
YLR224W	YLR224W	NUP85	P46673	744 aa		5.95	□□□□□ -1.46
YLR224W	YLR224W	SRF1	Q12516	437 aa		5.95	□□□□□ -1.46
YLR224W	YLR224W	LEO1	P38439	464 aa		5.94	□□□□□ -1.46
YLR224W	YLR224W	CAF120	P53836	1060 aa		5.94	□□□□□ -1.46
YLR224W	YLR224W	HPC2	Q01448	625 aa		5.94	□□□□□ -1.46
YLR224W	YLR224W	MKS1	P34072	584 aa		5.93	□□□□□ -1.46
YLR224W	YLR224W	ACO2	P39533	789 aa		5.92	□□□□□ -1.46
YLR224W	YLR224W	GUT2	P32191	649 aa		5.91	□□□□□ -1.46
YLR224W	YLR224W	YJR098C	P47139	656 aa		5.91	□□□□□ -1.46
YLR224W	YLR224W	ARG82	P07250	355 aa		5.9	□□□□□ -1.46
YLR224W	YLR224W	BIO2	P32451	375 aa		5.9	□□□□□ -1.46
YLR224W	YLR224W	YBL036C	P38197	257 aa		5.9	□□□□□ -1.46
YLR224W	YLR224W	TY1A-BL	Q12266	440 aa		5.9	□□□□□ -1.46
YLR224W	YLR224W	GLY1	P37303	387 aa	Known RBP	5.89	□□□□□ -1.47
YLR224W	YLR224W	YIR007W	P40566	764 aa		5.89	□□□□□ -1.47
YLR224W	YLR224W	EMP47	P43555	445 aa		5.89	□□□□□ -1.47
YLR224W	YLR224W	YLR346C	Q06139	101 aa		5.89	□□□□□ -1.47
YLR224W	YLR224W	FRA1	Q07825	749 aa		5.89	□□□□□ -1.47
YLR224W	YLR224W	TCB1	Q12466	1186 aa		5.89	□□□□□ -1.47
YLR224W	YLR224W	STE6	P12866	1290 aa		5.88	□□□□□ -1.47
YLR224W	YLR224W	FBP26	P32604	452 aa		5.88	□□□□□ -1.47
YLR224W	YLR224W	CSE4	P36012	229 aa		5.88	□□□□□ -1.47
YLR224W	YLR224W	RTT106	P40161	455 aa		5.88	□□□□□ -1.47
YLR224W	YLR224W	NAF1	P53919	492 aa	Known RBP	5.88	□□□□□ -1.47
YLR224W	YLR224W	STE20	Q03497	939 aa	Known RBP	5.88	□□□□□ -1.47
YLR224W	YLR224W	MIP1	P15801	1254 aa		5.87	□□□□□ -1.47
YLR224W	YLR224W	LSC2	P53312	427 aa		5.87	□□□□□ -1.47
YLR224W	YLR224W	ATG20	Q07528	640 aa		5.87	□□□□□ -1.47
YLR224W	YLR224W	HAL5	P38970	855 aa	Known RBP	5.86	□□□□□ -1.47
YLR224W	YLR224W	YNL108C	P53929	270 aa		5.86	□□□□□ -1.47
YLR224W	YLR224W	BDS1	Q08347	646 aa		5.86	□□□□□ -1.47
YLR224W	YLR224W	MCM16	Q12262	181 aa		5.86	□□□□□ -1.47
YLR224W	YLR224W	SUP45	P12385	437 aa	Known RBP	5.85	□□□□□ -1.47
YLR224W	YLR224W	BRL1	P38770	471 aa		5.85	□□□□□ -1.47
YLR224W	YLR224W	APL6	P46682	809 aa		5.85	□□□□□ -1.47
YLR224W	YLR224W	SCW11	P53189	542 aa		5.85	□□□□□ -1.47
YLR224W	YLR224W	ISU1	Q03020	165 aa		5.85	□□□□□ -1.47
YLR224W	YLR224W	ENO2	P00925	437 aa	Known RBP	5.84	□□□□□ -1.47
YLR224W	YLR224W	ISR1	Q06098	443 aa	Known RBP	5.83	□□□□□ -1.48
YLR224W	YLR224W	OSH7	P38755	437 aa		5.82	□□□□□ -1.48
YLR224W	YLR224W	YJL007C	P47080	104 aa		5.82	□□□□□ -1.48
YLR224W	YLR224W	NAM8	Q00539	523 aa	Known RBP	5.82	□□□□□ -1.48
YLR224W	YLR224W	CCP1	P00431	361 aa		5.81	□□□□□ -1.48
YLR224W	YLR224W	DMA2	P53924	522 aa		5.81	□□□□□ -1.48
YLR224W	YLR224W	UBP2	Q01476	1272 aa		5.81	□□□□□ -1.48
YLR224W	YLR224W	RDS2	P19541	446 aa	Known RBP	5.8	□□□□□ -1.48
YLR224W	YLR224W	WTM2	Q12206	467 aa		5.8	□□□□□ -1.48
YLR224W	YLR224W	SPT5	P27692	1063 aa	Known RBP	5.79	□□□□□ -1.48
YLR224W	YLR224W	SOH1	P38633	127 aa		5.79	□□□□□ -1.48
YLR224W	YLR224W	ATG32	P40458	529 aa		5.79	□□□□□ -1.48
YLR224W	YLR224W	ROG3	P43602	733 aa		5.79	□□□□□ -1.48
YLR224W	YLR224W	HPF1	Q05164	967 aa		5.79	□□□□□ -1.48
YLR224W	YLR224W	CDC19	P00549	500 aa	Known RBP	5.78	□□□□□ -1.48
YLR224W	YLR224W	BIM1	P40013	344 aa		5.78	□□□□□ -1.48
YLR224W	YLR224W	TY1A-MR1	Q04215	440 aa		5.78	□□□□□ -1.48
YLR224W	YLR224W	SSN3	P39073	555 aa		5.76	□□□□□ -1.49
YLR224W	YLR224W	SPT2	P06843	333 aa	Predicted RBP	5.75	□□□□□ -1.49
YLR224W	YLR224W	DAT1	P13483	248 aa	Known RBP	5.75	□□□□□ -1.49
YLR224W	YLR224W	UTP7	P40055	554 aa	Known RBP	5.75	□□□□□ -1.49
YLR224W	YLR224W	RIM21	P48565	533 aa		5.75	□□□□□ -1.49
YLR224W	YLR224W	DAL1	P32375	460 aa		5.74	□□□□□ -1.49
YLR224W	YLR224W	SLA1	P32790	1244 aa		5.74	□□□□□ -1.49
YLR224W	YLR224W	MRX12	P47084	519 aa		5.74	□□□□□ -1.49
YLR224W	YLR224W	MRX10	Q05648	414 aa		5.74	□□□□□ -1.49
YLR224W	YLR224W	HDA3	Q06623	655 aa		5.74	□□□□□ -1.49
YLR224W	YLR224W	TY1A-DR3	Q12441	440 aa		5.74	□□□□□ -1.49
YLR224W	YLR224W	TIF1	P10081	395 aa	Known RBP	5.73	□□□□□ -1.49
YLR224W	YLR224W	TRK2	P28584	889 aa		5.73	□□□□□ -1.49
YLR224W	YLR224W	UTR2	P32623	467 aa		5.73	□□□□□ -1.49
YLR224W	YLR224W	YGR035C	P53222	116 aa		5.73	□□□□□ -1.49
YLR224W	YLR224W	ENO1	P00924	437 aa	Known RBP	5.72	□□□□□ -1.49
YLR224W	YLR224W	SLX8	P40072	274 aa		5.72	□□□□□ -1.49
YLR224W	YLR224W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
YLR224W	YLR224W	DLD3	P39976	496 aa	Known RBP	5.7	□□□□□ -1.5
YLR224W	YLR224W	SHM1	P37292	490 aa	Predicted RBP	5.69	□□□□□ -1.5
YLR224W	YLR224W	VTC4	P47075	721 aa		5.69	□□□□□ -1.5
YLR224W	YLR224W	RTG2	P32608	588 aa	Known RBP	5.68	□□□□□ -1.5
YLR224W	YLR224W	CUZ1	P53899	274 aa		5.68	□□□□□ -1.5
YLR224W	YLR224W	UTP13	Q05946	817 aa	Known RBP	5.68	□□□□□ -1.5
YLR224W	YLR224W	YPP1	P46951	817 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms