RNA–Protein interactions for RNA: YLR212C

TUB4, Transcript of Gamma-tubulin, yeast

Gene TUB4, Length 1,422 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUB4	YLR212C	YCK3	P39962	524 aa		11.5	□□□□□ -0.57
TUB4	YLR212C	SPT7	P35177	1332 aa		11.49	□□□□□ -0.57
TUB4	YLR212C	BDF1	P35817	686 aa		11.49	□□□□□ -0.57
TUB4	YLR212C	ATG13	Q06628	738 aa		11.49	□□□□□ -0.57
TUB4	YLR212C	MSB4	Q12317	492 aa		11.49	□□□□□ -0.57
TUB4	YLR212C	KAR2	P16474	682 aa	Known RBP	11.45	□□□□□ -0.58
TUB4	YLR212C	ALD3	P54114	506 aa		11.45	□□□□□ -0.58
TUB4	YLR212C	INP54	Q08227	384 aa	Known RBP	11.45	□□□□□ -0.58
TUB4	YLR212C	OSM1	P21375	501 aa	Known RBP	11.44	□□□□□ -0.58
TUB4	YLR212C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
TUB4	YLR212C	GRE2	Q12068	342 aa	Known RBP	11.42	□□□□□ -0.58
TUB4	YLR212C	RAD4	P14736	754 aa		11.41	□□□□□ -0.58
TUB4	YLR212C	GRX1	P25373	110 aa	Known RBP	11.41	□□□□□ -0.58
TUB4	YLR212C	BUG1	Q12191	341 aa		11.41	□□□□□ -0.58
TUB4	YLR212C	RIM15	P43565	1770 aa		11.4	□□□□□ -0.58
TUB4	YLR212C	DSD1	P53095	428 aa		11.38	□□□□□ -0.59
TUB4	YLR212C	PAP2	P53632	584 aa	Known RBP	11.38	□□□□□ -0.59
TUB4	YLR212C	TOS1	P38288	455 aa		11.37	□□□□□ -0.59
TUB4	YLR212C	MRPL32	P25348	183 aa		11.36	□□□□□ -0.59
TUB4	YLR212C	HSP104	P31539	908 aa	Known RBP	11.36	□□□□□ -0.59
TUB4	YLR212C	YBP2	P53169	641 aa		11.36	□□□□□ -0.59
TUB4	YLR212C	UTP22	P53254	1237 aa	Predicted RBP	11.36	□□□□□ -0.59
TUB4	YLR212C	NUP145	P49687	1317 aa		11.36	□□□□□ -0.59
TUB4	YLR212C	EAF6	P47128	113 aa		11.35	□□□□□ -0.59
TUB4	YLR212C	NST1	P53935	1240 aa		11.35	□□□□□ -0.59
TUB4	YLR212C	CTF4	Q01454	927 aa		11.34	□□□□□ -0.59
TUB4	YLR212C	TUM1	Q08686	304 aa	Known RBP	11.34	□□□□□ -0.59
TUB4	YLR212C	TRK1	P12685	1235 aa		11.33	□□□□□ -0.6
TUB4	YLR212C	SAP155	P43612	1002 aa		11.33	□□□□□ -0.6
TUB4	YLR212C	HPC2	Q01448	625 aa		11.32	□□□□□ -0.6
TUB4	YLR212C	AKL1	P38080	1108 aa	Known RBP	11.31	□□□□□ -0.6
TUB4	YLR212C	MSN5	P52918	1224 aa		11.29	□□□□□ -0.6
TUB4	YLR212C	RIX7	Q07844	837 aa	Known RBP	11.28	□□□□□ -0.6
TUB4	YLR212C	AOS1	Q06624	347 aa		11.26	□□□□□ -0.61
TUB4	YLR212C	NYV1	Q12255	253 aa		11.26	□□□□□ -0.61
TUB4	YLR212C	CTT1	P06115	562 aa		11.25	□□□□□ -0.61
TUB4	YLR212C	PSD2	P53037	1138 aa	Known RBP	11.25	□□□□□ -0.61
TUB4	YLR212C	RMT2	Q03305	412 aa		11.25	□□□□□ -0.61
TUB4	YLR212C	NTH2	P35172	780 aa		11.23	□□□□□ -0.61
TUB4	YLR212C	RRT14	P40470	206 aa		11.23	□□□□□ -0.61
TUB4	YLR212C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.23	□□□□□ -0.61	not detected
TUB4	YLR212C	KCC4	P25389	1037 aa		11.22	□□□□□ -0.61
TUB4	YLR212C	ERT1	P38140	529 aa		11.22	□□□□□ -0.61
TUB4	YLR212C	CTI6	Q08923	506 aa		11.22	□□□□□ -0.61
TUB4	YLR212C	YKL222C	P35995	705 aa		11.21	□□□□□ -0.61
TUB4	YLR212C	YER156C	P40093	338 aa	Known RBP	11.21	□□□□□ -0.61
TUB4	YLR212C	TEA1	P47988	759 aa		11.21	□□□□□ -0.61
TUB4	YLR212C	KIN4	Q01919	800 aa		11.21	□□□□□ -0.61
TUB4	YLR212C	ALE1	Q08548	619 aa		11.21	□□□□□ -0.61
TUB4	YLR212C	NOP53	Q12080	455 aa	Known RBP	11.21	□□□□□ -0.61
TUB4	YLR212C	CWH41	P53008	833 aa		11.2	□□□□□ -0.62
TUB4	YLR212C	RRP46	P53256	223 aa	Predicted RBP	11.2	□□□□□ -0.62
TUB4	YLR212C	MDG1	P53885	366 aa		11.18	□□□□□ -0.62
TUB4	YLR212C	SER1	P33330	395 aa	Known RBP	11.17	□□□□□ -0.62
TUB4	YLR212C	PHM7	Q12252	991 aa		11.17	□□□□□ -0.62
TUB4	YLR212C	LPD1	P09624	499 aa	Known RBP	11.15	□□□□□ -0.62
TUB4	YLR212C	RTR1	P40084	226 aa	Predicted RBP	11.15	□□□□□ -0.62
TUB4	YLR212C	SQS1	P53866	767 aa	Known RBP	11.15	□□□□□ -0.62
TUB4	YLR212C	YFR016C	P43597	1233 aa	Known RBP	11.14	□□□□□ -0.63
TUB4	YLR212C	UGA3	P26370	528 aa		11.13	□□□□□ -0.63
TUB4	YLR212C	PFF1	P38244	976 aa		11.13	□□□□□ -0.63
TUB4	YLR212C	YGL082W	P53155	381 aa		11.12	□□□□□ -0.63
TUB4	YLR212C	SSP2	Q08646	371 aa		11.12	□□□□□ -0.63
TUB4	YLR212C	SMY1	P32364	656 aa	Known RBP	11.11	□□□□□ -0.63
TUB4	YLR212C	YNL050C	P53952	270 aa		11.11	□□□□□ -0.63
TUB4	YLR212C	TFA1	P36100	482 aa		11.1	□□□□□ -0.63
TUB4	YLR212C	RAT1	Q02792	1006 aa	Known RBP	11.1	□□□□□ -0.63
TUB4	YLR212C	NSE3	Q05541	303 aa		11.1	□□□□□ -0.63
TUB4	YLR212C	SPT21	P35209	758 aa		11.09	□□□□□ -0.63
TUB4	YLR212C	ARG8	P18544	423 aa		11.08	□□□□□ -0.64
TUB4	YLR212C	PRD1	P25375	712 aa		11.08	□□□□□ -0.64
TUB4	YLR212C	BDF2	Q07442	638 aa		11.08	□□□□□ -0.64
TUB4	YLR212C	ERO1	Q03103	563 aa		11.07	□□□□□ -0.64
TUB4	YLR212C	UTP10	P42945	1769 aa	Known RBP	11.07	□□□□□ -0.64
TUB4	YLR212C	DCD1	P06773	312 aa		11.06	□□□□□ -0.64
TUB4	YLR212C	ZDS1	P50111	915 aa	Known RBP	11.06	□□□□□ -0.64
TUB4	YLR212C	IRC3	Q06683	689 aa		11.06	□□□□□ -0.64
TUB4	YLR212C	APL2	P36000	726 aa	Predicted RBP	11.05	□□□□□ -0.64
TUB4	YLR212C	RRD1	P40454	393 aa	Known RBP	11.05	□□□□□ -0.64
TUB4	YLR212C	FPK1	P53739	893 aa		11.05	□□□□□ -0.64
TUB4	YLR212C	TOP1	P04786	769 aa		11.04	□□□□□ -0.64
TUB4	YLR212C	CAF20	P12962	161 aa	Known RBP	11.04	□□□□□ -0.64
TUB4	YLR212C	YBR287W	P38355	427 aa		11.04	□□□□□ -0.64
TUB4	YLR212C	IOC4	Q04213	475 aa		11.04	□□□□□ -0.64
TUB4	YLR212C	DIB1	Q06819	143 aa	Predicted RBP	11.04	□□□□□ -0.64
TUB4	YLR212C	YPR204W	Q08995	1032 aa		11.04	□□□□□ -0.64
TUB4	YLR212C	SSA4	P22202	642 aa	Known RBP	11.03	□□□□□ -0.64
TUB4	YLR212C	ICL1	P28240	557 aa	Predicted RBP	11.03	□□□□□ -0.64
TUB4	YLR212C	MPP10	P47083	593 aa	Known RBP	11.03	□□□□□ -0.64
TUB4	YLR212C	LYS2	P07702	1392 aa		11.03	□□□□□ -0.64
TUB4	YLR212C	COQ4	O13525	335 aa		11.01	□□□□□ -0.65
TUB4	YLR212C	SIT4	P20604	311 aa		11.01	□□□□□ -0.65
TUB4	YLR212C	MAM1	P40065	302 aa		11.01	□□□□□ -0.65
TUB4	YLR212C	PEX21	P50091	288 aa		11.01	□□□□□ -0.65
TUB4	YLR212C	ZDS2	P54786	942 aa		11.01	□□□□□ -0.65
TUB4	YLR212C	VPS64	Q03944	604 aa		11.01	□□□□□ -0.65
TUB4	YLR212C	THI22	Q06490	572 aa		11.01	□□□□□ -0.65
TUB4	YLR212C	BMS1	Q08965	1183 aa	Known RBP	11.01	□□□□□ -0.65
TUB4	YLR212C	SLI15	P38283	698 aa		11	□□□□□ -0.65
TUB4	YLR212C	YKU70	P32807	602 aa		10.99	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms