RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W GCR2Q01722 534 aa3.75□□□□□ -1.81
CFT2YLR115W RGA1P39083 1007 aa3.75□□□□□ -1.81
CFT2YLR115W EMW1P42842 904 aaKnown RBP3.75□□□□□ -1.81
CFT2YLR115W MET22P32179 357 aa3.74□□□□□ -1.81
CFT2YLR115W CSE4P36012 229 aa3.74□□□□□ -1.81
CFT2YLR115W YBL086CP38177 466 aa3.74□□□□□ -1.81
CFT2YLR115W TEC1P18412 486 aa3.74□□□□□ -1.81
CFT2YLR115W NAF1P53919 492 aaKnown RBP3.74□□□□□ -1.81
CFT2YLR115W APP1P53933 587 aa3.74□□□□□ -1.81
CFT2YLR115W BRL1P38770 471 aa3.73□□□□□ -1.81
CFT2YLR115W YDJ1P25491 409 aaKnown RBP3.72□□□□□ -1.81
CFT2YLR115W ENV9Q08651 330 aa3.72□□□□□ -1.81
CFT2YLR115W UGA3P26370 528 aa3.72□□□□□ -1.81
CFT2YLR115W BIO2P32451 375 aa3.72□□□□□ -1.81
CFT2YLR115W PTK2P47116 818 aaKnown RBP3.72□□□□□ -1.81
CFT2YLR115W FRA1Q07825 749 aa3.72□□□□□ -1.81
CFT2YLR115W YBL036CP38197 257 aa3.71□□□□□ -1.82
CFT2YLR115W RTT106P40161 455 aa3.71□□□□□ -1.82
CFT2YLR115W APL6P46682 809 aa3.71□□□□□ -1.82
CFT2YLR115W YDR444WQ04093 687 aa3.7□□□□□ -1.82
CFT2YLR115W LCB5Q06147 687 aaKnown RBP3.7□□□□□ -1.82
CFT2YLR115W SUP45P12385 437 aaKnown RBP3.7□□□□□ -1.82
CFT2YLR115W SPT5P27692 1063 aaKnown RBP3.7□□□□□ -1.82
CFT2YLR115W GUT2P32191 649 aa3.69□□□□□ -1.82
CFT2YLR115W MCM16Q12262 181 aa3.69□□□□□ -1.82
CFT2YLR115W ISF1P32488 338 aa3.68□□□□□ -1.82
CFT2YLR115W FBP26P32604 452 aa3.68□□□□□ -1.82
CFT2YLR115W EMP47P43555 445 aa3.68□□□□□ -1.82
CFT2YLR115W STE20Q03497 939 aaKnown RBP3.68□□□□□ -1.82
CFT2YLR115W YDL176WQ12027 708 aa3.68□□□□□ -1.82
CFT2YLR115W AAD14P42884 376 aa3.68□□□□□ -1.82
CFT2YLR115W OPT2Q06593 877 aa3.68□□□□□ -1.82
CFT2YLR115W GAR1P28007 205 aaKnown RBP3.67□□□□□ -1.82
CFT2YLR115W NUP85P46673 744 aa3.67□□□□□ -1.82
CFT2YLR115W STE6P12866 1290 aa3.67□□□□□ -1.82
CFT2YLR115W MKS1P34072 584 aa3.67□□□□□ -1.82
CFT2YLR115W YNL108CP53929 270 aa3.67□□□□□ -1.82
CFT2YLR115W ATG20Q07528 640 aa3.67□□□□□ -1.82
CFT2YLR115W ENO2P00925 437 aaKnown RBP3.66□□□□□ -1.82
CFT2YLR115W YPL062WQ02781 134 aa3.66□□□□□ -1.82
CFT2YLR115W DFG5Q05031 458 aa3.66□□□□□ -1.82
CFT2YLR115W YJL007CP47080 104 aa3.66□□□□□ -1.82
CFT2YLR115W ISU1Q03020 165 aa3.66□□□□□ -1.82
CFT2YLR115W SRF1Q12516 437 aa3.66□□□□□ -1.82
CFT2YLR115W RIM21P48565 533 aa3.65□□□□□ -1.82
CFT2YLR115W ARG82P07250 355 aa3.65□□□□□ -1.83
CFT2YLR115W RDS2P19541 446 aaKnown RBP3.65□□□□□ -1.83
CFT2YLR115W HAL5P38970 855 aaKnown RBP3.65□□□□□ -1.83
CFT2YLR115W BIM1P40013 344 aa3.65□□□□□ -1.83
CFT2YLR115W ATG32P40458 529 aa3.65□□□□□ -1.83
CFT2YLR115W MRX12P47084 519 aa3.65□□□□□ -1.83
CFT2YLR115W DLD1P32891 587 aa3.64□□□□□ -1.83
CFT2YLR115W YJR098CP47139 656 aa3.64□□□□□ -1.83
CFT2YLR115W TY1A-BLQ12266 440 aa3.64□□□□□ -1.83
CFT2YLR115W ACO2P39533 789 aa3.64□□□□□ -1.83
CFT2YLR115W BDS1Q08347 646 aa3.64□□□□□ -1.83
CFT2YLR115W TIF1P10081 395 aaKnown RBP3.63□□□□□ -1.83
CFT2YLR115W GLY1P37303 387 aaKnown RBP3.63□□□□□ -1.83
CFT2YLR115W MRX10Q05648 414 aa3.63□□□□□ -1.83
CFT2YLR115W ISR1Q06098 443 aaKnown RBP3.63□□□□□ -1.83
CFT2YLR115W LSC2P53312 427 aa3.62□□□□□ -1.83
CFT2YLR115W DMA2P53924 522 aa3.62□□□□□ -1.83
CFT2YLR115W MIP1P15801 1254 aa3.62□□□□□ -1.83
CFT2YLR115W YPP1P46951 817 aa3.62□□□□□ -1.83
CFT2YLR115W UTP13Q05946 817 aaKnown RBP3.62□□□□□ -1.83
CFT2YLR115W SPT2P06843 333 aaPredicted RBP3.61□□□□□ -1.83
CFT2YLR115W YLR346CQ06139 101 aa3.61□□□□□ -1.83
CFT2YLR115W TCB1Q12466 1186 aa3.61□□□□□ -1.83
CFT2YLR115W ENO1P00924 437 aaKnown RBP3.6□□□□□ -1.83
CFT2YLR115W SOH1P38633 127 aa3.6□□□□□ -1.83
CFT2YLR115W SCW11P53189 542 aa3.6□□□□□ -1.83
CFT2YLR115W CAF120P53836 1060 aa3.6□□□□□ -1.83
CFT2YLR115W YIR007WP40566 764 aa3.6□□□□□ -1.83
CFT2YLR115W VTC4P47075 721 aa3.6□□□□□ -1.83
CFT2YLR115W UBP2Q01476 1272 aa3.6□□□□□ -1.83
CFT2YLR115W RTG2P32608 588 aaKnown RBP3.59□□□□□ -1.83
CFT2YLR115W OSH7P38755 437 aa3.59□□□□□ -1.83
CFT2YLR115W HGH1P48362 394 aaKnown RBP3.59□□□□□ -1.83
CFT2YLR115W GBP2P25555 427 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
CFT2YLR115W PEP12P32854 288 aa3.59□□□□□ -1.83
CFT2YLR115W HDA3Q06623 655 aa3.59□□□□□ -1.83
CFT2YLR115W WTM2Q12206 467 aa3.59□□□□□ -1.83
CFT2YLR115W DAL1P32375 460 aa3.58□□□□□ -1.84
CFT2YLR115W SSN3P39073 555 aa3.58□□□□□ -1.84
CFT2YLR115W CCP1P00431 361 aa3.58□□□□□ -1.84
CFT2YLR115W SLX8P40072 274 aa3.58□□□□□ -1.84
CFT2YLR115W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
CFT2YLR115W UTR2P32623 467 aa3.57□□□□□ -1.84
CFT2YLR115W SLA1P32790 1244 aa3.57□□□□□ -1.84
CFT2YLR115W CDC19P00549 500 aaKnown RBP3.57□□□□□ -1.84
CFT2YLR115W ATG3P40344 310 aa3.57□□□□□ -1.84
CFT2YLR115W ROG3P43602 733 aa3.57□□□□□ -1.84
CFT2YLR115W NAM8Q00539 523 aaKnown RBP3.57□□□□□ -1.84
CFT2YLR115W TY1A-MR1Q04215 440 aa3.57□□□□□ -1.84
CFT2YLR115W TY1A-DR3Q12441 440 aa3.57□□□□□ -1.84
CFT2YLR115W MSN5P52918 1224 aa3.57□□□□□ -1.84
CFT2YLR115W DLD3P39976 496 aaKnown RBP3.56□□□□□ -1.84
CFT2YLR115W SUM1P46676 1062 aa3.56□□□□□ -1.84
CFT2YLR115W RPP2BP02400 110 aaKnown RBP3.55□□□□□ -1.84
CFT2YLR115W DAT1P13483 248 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms