RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W TYW1Q08960 810 aaKnown RBP5.35□□□□□ -1.55
AVT1YJR001W SPT7P35177 1332 aa5.35□□□□□ -1.55
AVT1YJR001W PSE1P32337 1089 aaKnown RBP5.34□□□□□ -1.55
AVT1YJR001W CSE4P36012 229 aa5.34□□□□□ -1.55
AVT1YJR001W NOC2P39744 710 aaKnown RBP5.34□□□□□ -1.55
AVT1YJR001W MDJ2P42834 146 aa5.34□□□□□ -1.55
AVT1YJR001W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
AVT1YJR001W RPO31P04051 1460 aa5.34□□□□□ -1.55
AVT1YJR001W RKR1Q04781 1562 aa5.34□□□□□ -1.55
AVT1YJR001W CHD1P32657 1468 aa5.34□□□□□ -1.55
AVT1YJR001W MFT1P33441 392 aaKnown RBP5.34□□□□□ -1.55
AVT1YJR001W YJR107WP47145 328 aa5.34□□□□□ -1.55
AVT1YJR001W DCD1P06773 312 aa5.33□□□□□ -1.56
AVT1YJR001W EDS1P38073 919 aa5.33□□□□□ -1.56
AVT1YJR001W YGL081WP53156 320 aa5.33□□□□□ -1.56
AVT1YJR001W NSE3Q05541 303 aa5.33□□□□□ -1.56
AVT1YJR001W SVL3Q03088 825 aaKnown RBP5.32□□□□□ -1.56
AVT1YJR001W COG4Q06096 861 aa5.32□□□□□ -1.56
AVT1YJR001W NKP1Q12493 238 aa5.32□□□□□ -1.56
AVT1YJR001W UFD4P33202 1483 aa5.32□□□□□ -1.56
AVT1YJR001W MMS22Q06164 1454 aa5.32□□□□□ -1.56
AVT1YJR001W ENO2P00925 437 aaKnown RBP5.32□□□□□ -1.56
AVT1YJR001W MNL2Q12205 849 aa5.32□□□□□ -1.56
AVT1YJR001W YOR1P53049 1477 aa5.31□□□□□ -1.56
AVT1YJR001W BPT1P14772 1559 aa5.31□□□□□ -1.56
AVT1YJR001W PWP2P25635 923 aaKnown RBP5.31□□□□□ -1.56
AVT1YJR001W SEC6P32844 805 aa5.31□□□□□ -1.56
AVT1YJR001W MET1P36150 593 aa5.31□□□□□ -1.56
AVT1YJR001W MAP2P38174 421 aaKnown RBP5.31□□□□□ -1.56
AVT1YJR001W VPS29P38759 282 aa5.31□□□□□ -1.56
AVT1YJR001W RIX1P38883 763 aaPredicted RBP5.31□□□□□ -1.56
AVT1YJR001W UBP12P39538 1254 aa5.31□□□□□ -1.56
AVT1YJR001W ALD6P54115 500 aaKnown RBP5.31□□□□□ -1.56
AVT1YJR001W CEF1Q03654 590 aaPredicted RBP5.31□□□□□ -1.56
AVT1YJR001W YMR196WQ04336 1088 aa5.31□□□□□ -1.56
AVT1YJR001W YCF1P39109 1515 aaKnown RBP5.31□□□□□ -1.56
AVT1YJR001W TY2B-LR1P0C2J3 1770 aa5.3□□□□□ -1.56
AVT1YJR001W TY2B-FP0CX63 1770 aa5.3□□□□□ -1.56
AVT1YJR001W TY2B-GR2P0CX64 1770 aa5.3□□□□□ -1.56
AVT1YJR001W TY2B-CP25384 1770 aa5.3□□□□□ -1.56
AVT1YJR001W TY2B-DR2Q03494 1770 aa5.3□□□□□ -1.56
AVT1YJR001W TY1B-DR1Q03855 1755 aa5.3□□□□□ -1.56
AVT1YJR001W TY2B-DR3Q07791 1770 aaKnown RBP5.3□□□□□ -1.56
AVT1YJR001W TY2B-OR1Q12113 1770 aa5.3□□□□□ -1.56
AVT1YJR001W TY2B-DR1Q12472 1770 aa5.3□□□□□ -1.56
AVT1YJR001W TY2B-OR2Q12501 1770 aa5.3□□□□□ -1.56
AVT1YJR001W QCR6P00127 147 aa5.3□□□□□ -1.56
AVT1YJR001W VPS24P36095 224 aaKnown RBP5.3□□□□□ -1.56
AVT1YJR001W FUN12P39730 1002 aaKnown RBP5.3□□□□□ -1.56
AVT1YJR001W TGL3P40308 642 aa5.3□□□□□ -1.56
AVT1YJR001W YJR142WP47173 342 aa5.3□□□□□ -1.56
AVT1YJR001W SSF2Q12153 453 aaPredicted RBP5.3□□□□□ -1.56
AVT1YJR001W YGR161W-CQ3E744 92 aa5.3□□□□□ -1.56
AVT1YJR001W TOP2P06786 1428 aaKnown RBP5.3□□□□□ -1.56
AVT1YJR001W NSR1P27476 414 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
AVT1YJR001W MIF2P35201 549 aa5.3□□□□□ -1.56
AVT1YJR001W BCH2P36122 765 aa5.3□□□□□ -1.56
AVT1YJR001W GRX7P38068 203 aa5.3□□□□□ -1.56
AVT1YJR001W FUI1P38196 639 aa5.3□□□□□ -1.56
AVT1YJR001W TPS3P38426 1054 aaKnown RBP5.3□□□□□ -1.56
AVT1YJR001W MNN1P39106 762 aa5.3□□□□□ -1.56
AVT1YJR001W DAL5P15365 543 aa5.29□□□□□ -1.56
AVT1YJR001W STI1P15705 589 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
AVT1YJR001W YDJ1P25491 409 aaKnown RBP5.29□□□□□ -1.56
AVT1YJR001W NFU1P32860 256 aa5.29□□□□□ -1.56
AVT1YJR001W GRS1P38088 690 aaKnown RBP5.29□□□□□ -1.56
AVT1YJR001W PBP2P38151 413 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
AVT1YJR001W MGE1P38523 228 aa5.29□□□□□ -1.56
AVT1YJR001W YJL049WP47048 450 aa5.29□□□□□ -1.56
AVT1YJR001W RIM21P48565 533 aa5.29□□□□□ -1.56
AVT1YJR001W PIL1P53252 339 aaKnown RBP5.29□□□□□ -1.56
AVT1YJR001W ESF2P53743 316 aaKnown RBP5.29□□□□□ -1.56
AVT1YJR001W KAR5Q04746 504 aa5.29□□□□□ -1.56
AVT1YJR001W RAD59Q12223 238 aa5.29□□□□□ -1.56
AVT1YJR001W TAF13P11747 167 aa5.28□□□□□ -1.56
AVT1YJR001W TRX2P22803 104 aaKnown RBP5.28□□□□□ -1.56
AVT1YJR001W PEP12P32854 288 aa5.28□□□□□ -1.56
AVT1YJR001W THI12P42883 340 aa5.28□□□□□ -1.56
AVT1YJR001W THI5P43534 340 aa5.28□□□□□ -1.56
AVT1YJR001W THI11P47183 340 aa5.28□□□□□ -1.56
AVT1YJR001W TEA1P47988 759 aa5.28□□□□□ -1.56
AVT1YJR001W ECM23Q02710 187 aa5.28□□□□□ -1.56
AVT1YJR001W THI13Q07748 340 aa5.28□□□□□ -1.56
AVT1YJR001W TY1B-DR3Q99231 1755 aa5.28□□□□□ -1.56
AVT1YJR001W SMC4Q12267 1418 aa5.28□□□□□ -1.56
AVT1YJR001W IES1P43579 692 aa5.27□□□□□ -1.57
AVT1YJR001W ITC1P53125 1264 aa5.27□□□□□ -1.57
AVT1YJR001W VPS16Q03308 798 aa5.27□□□□□ -1.57
AVT1YJR001W CWC15Q03772 175 aaKnown RBP5.27□□□□□ -1.57
AVT1YJR001W GRX3Q03835 250 aa5.27□□□□□ -1.57
AVT1YJR001W ENT2Q05785 613 aa5.27□□□□□ -1.57
AVT1YJR001W ERP4Q12450 207 aa5.27□□□□□ -1.57
AVT1YJR001W THS1P04801 734 aaKnown RBP5.27□□□□□ -1.57
AVT1YJR001W VHR2P40041 505 aa5.27□□□□□ -1.57
AVT1YJR001W YNL011CP53980 444 aa5.27□□□□□ -1.57
AVT1YJR001W PIN2Q12057 282 aa5.27□□□□□ -1.57
AVT1YJR001W MYO4P32492 1471 aa5.27□□□□□ -1.57
AVT1YJR001W HSC82P15108 705 aaKnown RBP5.26□□□□□ -1.57
AVT1YJR001W GLO3P38682 493 aaKnown RBP5.26□□□□□ -1.57
AVT1YJR001W YEN1P40028 759 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 78 ms