RNA–Protein interactions for RNA: YGL227W

VID30, Transcript of Central component of GID Complex, involved in FBPase degradation, yeastyeast

Gene VID30, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VID30YGL227W MSB3P48566 633 aaPredicted RBP6.98□□□□□ -1.29
VID30YGL227W FKH1P40466 484 aa6.98□□□□□ -1.29
VID30YGL227W PDI1P17967 522 aaKnown RBP6.98□□□□□ -1.29
VID30YGL227W PFF1P38244 976 aa6.98□□□□□ -1.29
VID30YGL227W ENP1P38333 483 aaKnown RBP6.97□□□□□ -1.29
VID30YGL227W CHZ1P40019 153 aaPredicted RBP6.97□□□□□ -1.29
VID30YGL227W NST1P53935 1240 aa6.97□□□□□ -1.29
VID30YGL227W XKS1P42826 600 aa6.96□□□□□ -1.29
VID30YGL227W RCM1P53972 490 aa6.96□□□□□ -1.3
VID30YGL227W SRF1Q12516 437 aa6.95□□□□□ -1.3
VID30YGL227W RPG1P38249 964 aaKnown RBP6.95□□□□□ -1.3
VID30YGL227W GLC3P32775 704 aa6.94□□□□□ -1.3
VID30YGL227W UBX2Q04228 584 aa6.93□□□□□ -1.3
VID30YGL227W PHM7Q12252 991 aa6.92□□□□□ -1.3
VID30YGL227W ERO1Q03103 563 aa6.91□□□□□ -1.3
VID30YGL227W NYV1Q12255 253 aa6.91□□□□□ -1.3
VID30YGL227W GRX6Q12438 231 aa6.9□□□□□ -1.3
VID30YGL227W COBP00163 385 aa6.9□□□□□ -1.3
VID30YGL227W GRE2Q12068 342 aaKnown RBP6.89□□□□□ -1.31
VID30YGL227W AUS1Q08409 1394 aa6.89□□□□□ -1.31
VID30YGL227W SHC1P39000 512 aa6.89□□□□□ -1.31
VID30YGL227W CSE4P36012 229 aa6.88□□□□□ -1.31
VID30YGL227W SIT4P20604 311 aa6.88□□□□□ -1.31
VID30YGL227W YER156CP40093 338 aaKnown RBP6.88□□□□□ -1.31
VID30YGL227W RAT1Q02792 1006 aaKnown RBP6.87□□□□□ -1.31
VID30YGL227W ORC1P54784 914 aaPredicted RBP6.87□□□□□ -1.31
VID30YGL227W LYS4P49367 693 aaPredicted RBP6.86□□□□□ -1.31
VID30YGL227W RCR1P38212 213 aa6.85□□□□□ -1.31
VID30YGL227W INP54Q08227 384 aaKnown RBP6.85□□□□□ -1.31
VID30YGL227W DIP2Q12220 943 aaPredicted RBP6.84□□□□□ -1.31
VID30YGL227W NUP145P49687 1317 aa6.84□□□□□ -1.31
VID30YGL227W ATG13Q06628 738 aa6.83□□□□□ -1.32
VID30YGL227W UGA3P26370 528 aa6.83□□□□□ -1.32
VID30YGL227W NSR1P27476 414 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
VID30YGL227W SSP2Q08646 371 aa6.82□□□□□ -1.32
VID30YGL227W YJR008WP47085 338 aa6.82□□□□□ -1.32
VID30YGL227W YLR278CQ05854 1341 aa6.81□□□□□ -1.32
VID30YGL227W GSC2P40989 1895 aa6.81□□□□□ -1.32
VID30YGL227W AAD16Q02895 342 aa6.8□□□□□ -1.32
VID30YGL227W PSF3Q12146 194 aa6.8□□□□□ -1.32
VID30YGL227W OSM1P21375 501 aaKnown RBP6.8□□□□□ -1.32
VID30YGL227W ADR1P07248 1323 aa6.8□□□□□ -1.32
VID30YGL227W MSN5P52918 1224 aa6.79□□□□□ -1.32
VID30YGL227W RTG2P32608 588 aaKnown RBP6.79□□□□□ -1.32
VID30YGL227W ADE16P54113 591 aaKnown RBP6.79□□□□□ -1.32
VID30YGL227W SAC3P46674 1301 aa6.78□□□□□ -1.32
VID30YGL227W RMT2Q03305 412 aa6.78□□□□□ -1.32
VID30YGL227W RPS24AP0CX31 135 aaKnown RBP6.77□□□□□ -1.33
VID30YGL227W RPS24BP0CX32 135 aaKnown RBP6.77□□□□□ -1.33
VID30YGL227W KIP3P53086 805 aaKnown RBP6.77□□□□□ -1.33
VID30YGL227W BSD2P38356 321 aa6.76□□□□□ -1.33
VID30YGL227W ATG20Q07528 640 aa6.76□□□□□ -1.33
VID30YGL227W KCC4P25389 1037 aa6.75□□□□□ -1.33
VID30YGL227W ETP1P38748 585 aaKnown RBP6.75□□□□□ -1.33
VID30YGL227W MAM1P40065 302 aa6.75□□□□□ -1.33
VID30YGL227W KIN4Q01919 800 aa6.75□□□□□ -1.33
VID30YGL227W RRD1P40454 393 aaKnown RBP6.75□□□□□ -1.33
VID30YGL227W AOS1Q06624 347 aa6.74□□□□□ -1.33
VID30YGL227W DSD1P53095 428 aa6.74□□□□□ -1.33
VID30YGL227W SSA4P22202 642 aaKnown RBP6.73□□□□□ -1.33
VID30YGL227W RRT6P53117 311 aaPredicted RBP6.73□□□□□ -1.33
VID30YGL227W FAS2P19097 1887 aaKnown RBP6.72□□□□□ -1.33
VID30YGL227W SYF1Q04048 859 aaPredicted RBP6.72□□□□□ -1.33
VID30YGL227W NPL4P33755 580 aa6.72□□□□□ -1.33
VID30YGL227W CRF1Q04930 467 aa6.72□□□□□ -1.33
VID30YGL227W HGH1P48362 394 aaKnown RBP6.71□□□□□ -1.33
VID30YGL227W EAR1Q03212 550 aa6.71□□□□□ -1.33
VID30YGL227W YBP2P53169 641 aa6.71□□□□□ -1.34
VID30YGL227W TIM50Q02776 476 aa6.71□□□□□ -1.34
VID30YGL227W DAL5P15365 543 aa6.71□□□□□ -1.34
VID30YGL227W RSC30P38781 883 aa6.71□□□□□ -1.34
VID30YGL227W YNL050CP53952 270 aa6.71□□□□□ -1.34
VID30YGL227W PES4P39684 611 aa6.7□□□□□ -1.34
VID30YGL227W DUS1P53759 423 aaKnown RBP6.7□□□□□ -1.34
VID30YGL227W NOP53Q12080 455 aaKnown RBP6.7□□□□□ -1.34
VID30YGL227W DPS1P04802 557 aaKnown RBP6.7□□□□□ -1.34
VID30YGL227W RET1P22276 1149 aaKnown RBP6.7□□□□□ -1.34
VID30YGL227W CST9Q06032 482 aa6.7□□□□□ -1.34
VID30YGL227W FRK1Q03002 865 aaPredicted RBP6.69□□□□□ -1.34
VID30YGL227W NCS6P53088 359 aa6.69□□□□□ -1.34
VID30YGL227W NSE3Q05541 303 aa6.69□□□□□ -1.34
VID30YGL227W TIF6Q12522 245 aaKnown RBP6.69□□□□□ -1.34
VID30YGL227W UBP16Q02863 499 aa6.68□□□□□ -1.34
VID30YGL227W YLR271WQ06152 274 aa6.68□□□□□ -1.34
VID30YGL227W HAT1Q12341 374 aa6.68□□□□□ -1.34
VID30YGL227W SET1P38827 1080 aaKnown RBP6.67□□□□□ -1.34
VID30YGL227W AIM21P40563 679 aa6.67□□□□□ -1.34
VID30YGL227W LPD1P09624 499 aaKnown RBP6.67□□□□□ -1.34
VID30YGL227W HVG1P0CE11 249 aa6.67□□□□□ -1.34
VID30YGL227W EAF6P47128 113 aa6.66□□□□□ -1.34
VID30YGL227W HPC2Q01448 625 aa6.66□□□□□ -1.34
VID30YGL227W WHI3P34761 661 aaKnown RBP6.65□□□□□ -1.35
VID30YGL227W NUG1P40010 520 aaKnown RBP6.65□□□□□ -1.35
VID30YGL227W GEF1P37020 779 aa6.64□□□□□ -1.35
VID30YGL227W NTH2P35172 780 aa6.64□□□□□ -1.35
VID30YGL227W TIF4632P39936 914 aaKnown RBP6.63□□□□□ -1.35
VID30YGL227W MTC5Q03897 1148 aa6.63□□□□□ -1.35
VID30YGL227W BDF2Q07442 638 aa6.63□□□□□ -1.35
VID30YGL227W RPP0P05317 312 aaKnown RBP6.63□□□□□ -1.35
VID30YGL227W DIT2P21595 489 aa6.63□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms