RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W VAC8P39968 578 aa5.26□□□□□ -1.57
PTR3YFR029W RPS0BP46654 252 aaKnown RBP5.26□□□□□ -1.57
PTR3YFR029W ALD3P54114 506 aa5.26□□□□□ -1.57
PTR3YFR029W YDL121CQ07541 149 aa5.26□□□□□ -1.57
PTR3YFR029W YHL050CP38721 697 aa5.26□□□□□ -1.57
PTR3YFR029W YHR219WP38900 624 aa5.26□□□□□ -1.57
PTR3YFR029W SVF1Q05515 481 aa5.26□□□□□ -1.57
PTR3YFR029W YEL077CQ3E7X8 1277 aa5.26□□□□□ -1.57
PTR3YFR029W MPE1P35728 441 aaKnown RBP5.25□□□□□ -1.57
PTR3YFR029W RRP14P36080 434 aaKnown RBP5.25□□□□□ -1.57
PTR3YFR029W FPR3P38911 411 aaKnown RBP5.25□□□□□ -1.57
PTR3YFR029W TY4A-JP47023 414 aa5.25□□□□□ -1.57
PTR3YFR029W YOL036WQ08206 761 aa5.25□□□□□ -1.57
PTR3YFR029W PPX1P38698 397 aa5.24□□□□□ -1.57
PTR3YFR029W TFG1P41895 735 aaPredicted RBP5.24□□□□□ -1.57
PTR3YFR029W SVL3Q03088 825 aaKnown RBP5.24□□□□□ -1.57
PTR3YFR029W HIF1Q12373 385 aa5.24□□□□□ -1.57
PTR3YFR029W BUD6P41697 788 aa5.24□□□□□ -1.57
PTR3YFR029W SET4P42948 560 aa5.24□□□□□ -1.57
PTR3YFR029W ECM23Q02710 187 aa5.24□□□□□ -1.57
PTR3YFR029W ARG8P18544 423 aa5.23□□□□□ -1.57
PTR3YFR029W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
PTR3YFR029W SRP40P32583 406 aaPredicted RBP5.23□□□□□ -1.57
PTR3YFR029W YJR107WP47145 328 aa5.23□□□□□ -1.57
PTR3YFR029W YNL035CP53962 389 aaKnown RBP5.23□□□□□ -1.57
PTR3YFR029W DNM1P54861 757 aa5.23□□□□□ -1.57
PTR3YFR029W SEC61P32915 480 aa5.23□□□□□ -1.57
PTR3YFR029W ECM16Q04217 1267 aaKnown RBP5.23□□□□□ -1.57
PTR3YFR029W YPR109WQ06104 294 aa5.23□□□□□ -1.57
PTR3YFR029W RAD2P07276 1031 aa5.22□□□□□ -1.57
PTR3YFR029W GAL2P13181 574 aa5.22□□□□□ -1.57
PTR3YFR029W VMA4P22203 233 aaKnown RBP5.22□□□□□ -1.57
PTR3YFR029W YKL091CP33324 310 aaKnown RBP5.22□□□□□ -1.57
PTR3YFR029W MET1P36150 593 aa5.22□□□□□ -1.57
PTR3YFR029W ENP1P38333 483 aaKnown RBP5.22□□□□□ -1.57
PTR3YFR029W BOI2P39969 1040 aa5.22□□□□□ -1.57
PTR3YFR029W YMR196WQ04336 1088 aa5.22□□□□□ -1.57
PTR3YFR029W GIR2Q03768 265 aaPredicted RBP5.21□□□□□ -1.57
PTR3YFR029W ALD6P54115 500 aaKnown RBP5.21□□□□□ -1.58
PTR3YFR029W MNL2Q12205 849 aa5.21□□□□□ -1.58
PTR3YFR029W ERP2P39704 215 aa5.2□□□□□ -1.58
PTR3YFR029W BOL3P39724 118 aa5.2□□□□□ -1.58
PTR3YFR029W YJR142WP47173 342 aa5.2□□□□□ -1.58
PTR3YFR029W NAF1P53919 492 aaKnown RBP5.2□□□□□ -1.58
PTR3YFR029W RPN4Q03465 531 aa5.2□□□□□ -1.58
PTR3YFR029W CSC1Q06538 782 aa5.2□□□□□ -1.58
PTR3YFR029W MPH3P0CE00 602 aa5.19□□□□□ -1.58
PTR3YFR029W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
PTR3YFR029W KAR5Q04746 504 aa5.19□□□□□ -1.58
PTR3YFR029W MCM16Q12262 181 aa5.19□□□□□ -1.58
PTR3YFR029W FRT1Q99332 602 aa5.19□□□□□ -1.58
PTR3YFR029W AI4P03878 556 aa5.19□□□□□ -1.58
PTR3YFR029W MET4P32389 672 aa5.19□□□□□ -1.58
PTR3YFR029W GRS1P38088 690 aaKnown RBP5.19□□□□□ -1.58
PTR3YFR029W UBX7P38349 436 aa5.19□□□□□ -1.58
PTR3YFR029W FYV10P40492 516 aa5.19□□□□□ -1.58
PTR3YFR029W ATG1P53104 897 aa5.19□□□□□ -1.58
PTR3YFR029W RLP24Q07915 199 aaKnown RBP5.19□□□□□ -1.58
PTR3YFR029W PBP2P38151 413 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
PTR3YFR029W FUI1P38196 639 aa5.18□□□□□ -1.58
PTR3YFR029W NSE3Q05541 303 aa5.18□□□□□ -1.58
PTR3YFR029W SSF2Q12153 453 aaPredicted RBP5.18□□□□□ -1.58
PTR3YFR029W SEC6P32844 805 aa5.18□□□□□ -1.58
PTR3YFR029W SLI15P38283 698 aa5.18□□□□□ -1.58
PTR3YFR029W KTR7P40504 517 aa5.18□□□□□ -1.58
PTR3YFR029W POB3Q04636 552 aaKnown RBP5.18□□□□□ -1.58
PTR3YFR029W NUT2Q06213 157 aa5.18□□□□□ -1.58
PTR3YFR029W BCK2P33306 851 aa5.17□□□□□ -1.58
PTR3YFR029W UBP12P39538 1254 aa5.17□□□□□ -1.58
PTR3YFR029W RPT2P40327 437 aaKnown RBP5.17□□□□□ -1.58
PTR3YFR029W YPP1P46951 817 aa5.17□□□□□ -1.58
PTR3YFR029W PUF6Q04373 656 aaKnown RBP5.17□□□□□ -1.58
PTR3YFR029W GYP5Q12344 894 aa5.17□□□□□ -1.58
PTR3YFR029W DAL5P15365 543 aa5.16□□□□□ -1.58
PTR3YFR029W POL5P39985 1022 aaKnown RBP5.16□□□□□ -1.58
PTR3YFR029W THI12P42883 340 aa5.16□□□□□ -1.58
PTR3YFR029W THI5P43534 340 aa5.16□□□□□ -1.58
PTR3YFR029W THI11P47183 340 aa5.16□□□□□ -1.58
PTR3YFR029W MTO1P53070 669 aa5.16□□□□□ -1.58
PTR3YFR029W TMA64Q04600 565 aaKnown RBP5.16□□□□□ -1.58
PTR3YFR029W THI13Q07748 340 aa5.16□□□□□ -1.58
PTR3YFR029W KAR1P11927 433 aa5.16□□□□□ -1.58
PTR3YFR029W NFU1P32860 256 aa5.16□□□□□ -1.58
PTR3YFR029W MNN1P39106 762 aa5.16□□□□□ -1.58
PTR3YFR029W ROM1P53046 1155 aa5.16□□□□□ -1.58
PTR3YFR029W VPS16Q03308 798 aa5.15□□□□□ -1.58
PTR3YFR029W TFB4Q12004 338 aa5.15□□□□□ -1.58
PTR3YFR029W ISF1P32488 338 aa5.14□□□□□ -1.59
PTR3YFR029W GLO3P38682 493 aaKnown RBP5.14□□□□□ -1.59
PTR3YFR029W TAT2P38967 592 aa5.14□□□□□ -1.59
PTR3YFR029W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
PTR3YFR029W APL6P46682 809 aa5.14□□□□□ -1.59
PTR3YFR029W PNP1Q05788 311 aa5.14□□□□□ -1.59
PTR3YFR029W COG4Q06096 861 aa5.14□□□□□ -1.59
PTR3YFR029W TRM1P15565 570 aaKnown RBP5.14□□□□□ -1.59
PTR3YFR029W SLY41P22215 453 aa5.14□□□□□ -1.59
PTR3YFR029W YEN1P40028 759 aa5.14□□□□□ -1.59
PTR3YFR029W CDC73Q06697 393 aa5.14□□□□□ -1.59
PTR3YFR029W TRX2P22803 104 aaKnown RBP5.13□□□□□ -1.59
PTR3YFR029W SAP30P38429 201 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 97 ms