RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C NOP2P40991 618 aaKnown RBP2.92□□□□□ -1.94
SSD1YDR293C YOR238WQ08634 303 aa2.92□□□□□ -1.94
SSD1YDR293C AIM7Q12156 149 aa2.92□□□□□ -1.94
SSD1YDR293C BCK1Q01389 1478 aa2.92□□□□□ -1.94
SSD1YDR293C BNR1P40450 1375 aa2.92□□□□□ -1.94
SSD1YDR293C NOB1Q08444 459 aaKnown RBP2.92□□□□□ -1.94
SSD1YDR293C BUD31P25337 157 aaPredicted RBP2.91□□□□□ -1.94
SSD1YDR293C RAD54P32863 898 aa2.91□□□□□ -1.94
SSD1YDR293C IPL1P38991 367 aa2.91□□□□□ -1.94
SSD1YDR293C TY3B-IQ7LHG5 1498 aaKnown RBP2.91□□□□□ -1.94
SSD1YDR293C YBT1P32386 1661 aa2.91□□□□□ -1.94
SSD1YDR293C ISF1P32488 338 aa2.91□□□□□ -1.94
SSD1YDR293C GRS1P38088 690 aaKnown RBP2.91□□□□□ -1.94
SSD1YDR293C DCW1P36091 449 aa2.9□□□□□ -1.94
SSD1YDR293C TTI1P36097 1038 aa2.9□□□□□ -1.94
SSD1YDR293C TEA1P47988 759 aa2.9□□□□□ -1.94
SSD1YDR293C YSP2Q06681 1438 aa2.9□□□□□ -1.94
SSD1YDR293C USO1P25386 1790 aa2.9□□□□□ -1.94
SSD1YDR293C UBX7P38349 436 aa2.9□□□□□ -1.94
SSD1YDR293C MRX12P47084 519 aa2.9□□□□□ -1.95
SSD1YDR293C SNU71P53207 620 aaKnown RBP2.9□□□□□ -1.95
SSD1YDR293C ENO1P00924 437 aaKnown RBP2.89□□□□□ -1.95
SSD1YDR293C SSA2P10592 639 aaKnown RBP2.89□□□□□ -1.95
SSD1YDR293C MAK21Q12176 1025 aaKnown RBP2.89□□□□□ -1.95
SSD1YDR293C DRS2P39524 1355 aa2.89□□□□□ -1.95
SSD1YDR293C ALD4P46367 519 aaKnown RBP2.88□□□□□ -1.95
SSD1YDR293C YBL113CQ7M4S9 792 aa2.88□□□□□ -1.95
SSD1YDR293C YRF1-4O13559 1382 aa2.88□□□□□ -1.95
SSD1YDR293C YML133CQ03099 1374 aa2.88□□□□□ -1.95
SSD1YDR293C YLL067CQ07888 1374 aa2.88□□□□□ -1.95
SSD1YDR293C YLL066CQ99208 1374 aa2.88□□□□□ -1.95
SSD1YDR293C SEC7P11075 2009 aaKnown RBP2.88□□□□□ -1.95
SSD1YDR293C COX6P00427 148 aa2.88□□□□□ -1.95
SSD1YDR293C SLX5P32828 619 aaKnown RBP2.88□□□□□ -1.95
SSD1YDR293C PPG1P32838 368 aa2.88□□□□□ -1.95
SSD1YDR293C YJR008WP47085 338 aa2.88□□□□□ -1.95
SSD1YDR293C YMR1P47147 688 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SSD1YDR293C OYE2Q03558 400 aaKnown RBP2.88□□□□□ -1.95
SSD1YDR293C RAD59Q12223 238 aa2.88□□□□□ -1.95
SSD1YDR293C PEP7P32609 515 aa2.87□□□□□ -1.95
SSD1YDR293C HPC2Q01448 625 aa2.87□□□□□ -1.95
SSD1YDR293C ENV9Q08651 330 aa2.87□□□□□ -1.95
SSD1YDR293C MMP1Q12372 583 aa2.87□□□□□ -1.95
SSD1YDR293C YLR419WQ06698 1435 aaKnown RBP2.86□□□□□ -1.95
SSD1YDR293C BRN1P38170 754 aa2.86□□□□□ -1.95
SSD1YDR293C YPR109WQ06104 294 aa2.86□□□□□ -1.95
SSD1YDR293C CDC45Q08032 650 aa2.86□□□□□ -1.95
SSD1YDR293C NOP8Q08287 484 aaPredicted RBP2.86□□□□□ -1.95
SSD1YDR293C ENO2P00925 437 aaKnown RBP2.86□□□□□ -1.95
SSD1YDR293C SLY41P22215 453 aa2.86□□□□□ -1.95
SSD1YDR293C PUP1P25043 261 aa2.86□□□□□ -1.95
SSD1YDR293C BUD27P43573 796 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
SSD1YDR293C YLR326WQ06170 240 aaKnown RBP2.86□□□□□ -1.95
SSD1YDR293C GRE2Q12068 342 aaKnown RBP2.86□□□□□ -1.95
SSD1YDR293C SIS1P25294 352 aaKnown RBP2.85□□□□□ -1.95
SSD1YDR293C FPR3P38911 411 aaKnown RBP2.85□□□□□ -1.95
SSD1YDR293C SET4P42948 560 aa2.85□□□□□ -1.95
SSD1YDR293C KAR5Q04746 504 aa2.85□□□□□ -1.95
SSD1YDR293C FPK1P53739 893 aa2.85□□□□□ -1.95
SSD1YDR293C TUM1Q08686 304 aaKnown RBP2.85□□□□□ -1.95
SSD1YDR293C VPS27P40343 622 aaKnown RBP2.84□□□□□ -1.95
SSD1YDR293C POL32P47110 350 aa2.84□□□□□ -1.95
SSD1YDR293C ALD2P47771 506 aa2.84□□□□□ -1.95
SSD1YDR293C NIS1P53939 407 aa2.84□□□□□ -1.95
SSD1YDR293C ORC1P54784 914 aaPredicted RBP2.84□□□□□ -1.95
SSD1YDR293C ECM16Q04217 1267 aaKnown RBP2.84□□□□□ -1.95
SSD1YDR293C YGL015CP33199 130 aa2.84□□□□□ -1.95
SSD1YDR293C PCS60P38137 543 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SSD1YDR293C PEX21P50091 288 aa2.84□□□□□ -1.96
SSD1YDR293C PDS5Q04264 1277 aa2.84□□□□□ -1.96
SSD1YDR293C SSF1P38789 453 aaPredicted RBP2.83□□□□□ -1.96
SSD1YDR293C ERP5P38819 212 aa2.83□□□□□ -1.96
SSD1YDR293C VAC8P39968 578 aa2.83□□□□□ -1.96
SSD1YDR293C YDR090CQ03193 310 aa2.83□□□□□ -1.96
SSD1YDR293C WSC3Q12215 556 aa2.83□□□□□ -1.96
SSD1YDR293C GRX4P32642 244 aa2.83□□□□□ -1.96
SSD1YDR293C TGL4P36165 910 aa2.83□□□□□ -1.96
SSD1YDR293C GTT3P39996 337 aa2.83□□□□□ -1.96
SSD1YDR293C CWC24P53769 259 aa2.83□□□□□ -1.96
SSD1YDR293C KEX1P09620 729 aa2.82□□□□□ -1.96
SSD1YDR293C RTF1P53064 558 aa2.82□□□□□ -1.96
SSD1YDR293C MCM2P29469 868 aa2.82□□□□□ -1.96
SSD1YDR293C YAP3P38749 330 aa2.82□□□□□ -1.96
SSD1YDR293C TAP42Q04372 366 aa2.82□□□□□ -1.96
SSD1YDR293C CDC73Q06697 393 aa2.82□□□□□ -1.96
SSD1YDR293C GYP5Q12344 894 aa2.82□□□□□ -1.96
SSD1YDR293C NSR1P27476 414 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SSD1YDR293C SRP40P32583 406 aaPredicted RBP2.81□□□□□ -1.96
SSD1YDR293C PSK1P31374 1356 aa2.81□□□□□ -1.96
SSD1YDR293C SPE2P21182 396 aa2.81□□□□□ -1.96
SSD1YDR293C TSR4P25040 408 aa2.81□□□□□ -1.96
SSD1YDR293C YKL091CP33324 310 aaKnown RBP2.81□□□□□ -1.96
SSD1YDR293C YHL050CP38721 697 aa2.81□□□□□ -1.96
SSD1YDR293C YHR219WP38900 624 aa2.81□□□□□ -1.96
SSD1YDR293C YEL077CQ3E7X8 1277 aa2.81□□□□□ -1.96
SSD1YDR293C SIR4P11978 1358 aa2.81□□□□□ -1.96
SSD1YDR293C ATE1P16639 503 aa2.8□□□□□ -1.96
SSD1YDR293C YIL177CP40434 1758 aa2.8□□□□□ -1.96
SSD1YDR293C YJL225CP40889 1758 aa2.8□□□□□ -1.96
SSD1YDR293C VMA1P17255 1071 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms