RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W GUA1P38625 525 aaKnown RBP2.92□□□□□ -1.94
SIR4YDR227W TFB3Q03290 321 aa2.92□□□□□ -1.94
SIR4YDR227W NUP188P52593 1655 aaKnown RBP2.92□□□□□ -1.94
SIR4YDR227W PEP7P32609 515 aa2.92□□□□□ -1.94
SIR4YDR227W TFC8Q12308 588 aa2.92□□□□□ -1.94
SIR4YDR227W CWC24P53769 259 aa2.91□□□□□ -1.94
SIR4YDR227W YRF1-2P40105 1681 aa2.91□□□□□ -1.94
SIR4YDR227W CTT1P06115 562 aa2.91□□□□□ -1.94
SIR4YDR227W PKC1P24583 1151 aa2.91□□□□□ -1.94
SIR4YDR227W SIR4P11978 1358 aa2.91□□□□□ -1.94
SIR4YDR227W YKL091CP33324 310 aaKnown RBP2.91□□□□□ -1.94
SIR4YDR227W GRX7P38068 203 aa2.91□□□□□ -1.94
SIR4YDR227W RPA135P22138 1203 aaKnown RBP2.9□□□□□ -1.94
SIR4YDR227W SET1P38827 1080 aaKnown RBP2.9□□□□□ -1.95
SIR4YDR227W SSA4P22202 642 aaKnown RBP2.9□□□□□ -1.95
SIR4YDR227W FPK1P53739 893 aa2.9□□□□□ -1.95
SIR4YDR227W FMP30Q02883 468 aa2.9□□□□□ -1.95
SIR4YDR227W PSK1P31374 1356 aa2.9□□□□□ -1.95
SIR4YDR227W NCS6P53088 359 aa2.89□□□□□ -1.95
SIR4YDR227W FOX2Q02207 900 aaKnown RBP2.89□□□□□ -1.95
SIR4YDR227W MSC7P38694 644 aa2.89□□□□□ -1.95
SIR4YDR227W FRK1Q03002 865 aaPredicted RBP2.88□□□□□ -1.95
SIR4YDR227W BIM1P40013 344 aa2.88□□□□□ -1.95
SIR4YDR227W RNH70P53331 553 aa2.88□□□□□ -1.95
SIR4YDR227W ENT2Q05785 613 aa2.88□□□□□ -1.95
SIR4YDR227W TOP1P04786 769 aa2.88□□□□□ -1.95
SIR4YDR227W MRX12P47084 519 aa2.88□□□□□ -1.95
SIR4YDR227W SCY1P53009 804 aa2.88□□□□□ -1.95
SIR4YDR227W SUB2Q07478 446 aaKnown RBP2.88□□□□□ -1.95
SIR4YDR227W USO1P25386 1790 aa2.87□□□□□ -1.95
SIR4YDR227W YBL036CP38197 257 aa2.87□□□□□ -1.95
SIR4YDR227W KIP3P53086 805 aaKnown RBP2.87□□□□□ -1.95
SIR4YDR227W SAS10Q12136 610 aaPredicted RBP2.87□□□□□ -1.95
SIR4YDR227W MST1P07236 462 aa2.87□□□□□ -1.95
SIR4YDR227W PBS2P08018 668 aa2.87□□□□□ -1.95
SIR4YDR227W YIL177CP40434 1758 aa2.86□□□□□ -1.95
SIR4YDR227W YJL225CP40889 1758 aa2.86□□□□□ -1.95
SIR4YDR227W STS1P38637 319 aa2.86□□□□□ -1.95
SIR4YDR227W ATG32P40458 529 aa2.86□□□□□ -1.95
SIR4YDR227W EAP1P36041 632 aaKnown RBP2.86□□□□□ -1.95
SIR4YDR227W YOR238WQ08634 303 aa2.86□□□□□ -1.95
SIR4YDR227W CDC3P32457 520 aaKnown RBP2.86□□□□□ -1.95
SIR4YDR227W RRP14P36080 434 aaKnown RBP2.86□□□□□ -1.95
SIR4YDR227W MRM1P25270 412 aa2.85□□□□□ -1.95
SIR4YDR227W RIM101P33400 625 aa2.85□□□□□ -1.95
SIR4YDR227W BCH2P36122 765 aa2.85□□□□□ -1.95
SIR4YDR227W FAA3P39002 694 aa2.85□□□□□ -1.95
SIR4YDR227W YER156CP40093 338 aaKnown RBP2.85□□□□□ -1.95
SIR4YDR227W YJL171CP46992 396 aa2.85□□□□□ -1.95
SIR4YDR227W PSD2P53037 1138 aaKnown RBP2.85□□□□□ -1.95
SIR4YDR227W YNL108CP53929 270 aa2.85□□□□□ -1.95
SIR4YDR227W ERP2P39704 215 aa2.85□□□□□ -1.95
SIR4YDR227W MAD1P40957 749 aa2.85□□□□□ -1.95
SIR4YDR227W MAM3Q12296 706 aa2.85□□□□□ -1.95
SIR4YDR227W RTG2P32608 588 aaKnown RBP2.84□□□□□ -1.95
SIR4YDR227W ORC1P54784 914 aaPredicted RBP2.84□□□□□ -1.95
SIR4YDR227W SVF1Q05515 481 aa2.84□□□□□ -1.95
SIR4YDR227W YKL222CP35995 705 aa2.84□□□□□ -1.95
SIR4YDR227W MAP2P38174 421 aaKnown RBP2.84□□□□□ -1.95
SIR4YDR227W VAC8P39968 578 aa2.84□□□□□ -1.95
SIR4YDR227W GRS1P38088 690 aaKnown RBP2.84□□□□□ -1.96
SIR4YDR227W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.84□□□□□ -1.96not detected
SIR4YDR227W UTP22P53254 1237 aaPredicted RBP2.84□□□□□ -1.96
SIR4YDR227W YML083CQ04526 418 aa2.84□□□□□ -1.96
SIR4YDR227W VMA1P17255 1071 aaKnown RBP2.83□□□□□ -1.96
SIR4YDR227W DIT2P21595 489 aa2.83□□□□□ -1.96
SIR4YDR227W SPC42P36094 363 aa2.83□□□□□ -1.96
SIR4YDR227W MGA2P40578 1113 aa2.83□□□□□ -1.96
SIR4YDR227W FKH1P40466 484 aa2.83□□□□□ -1.96
SIR4YDR227W CST6P40535 587 aa2.83□□□□□ -1.96
SIR4YDR227W NYV1Q12255 253 aa2.83□□□□□ -1.96
SIR4YDR227W PPH3P32345 308 aa2.82□□□□□ -1.96
SIR4YDR227W YOR131CQ12486 218 aa2.82□□□□□ -1.96
SIR4YDR227W ASF1P32447 279 aa2.82□□□□□ -1.96
SIR4YDR227W SPT16P32558 1035 aaKnown RBP2.82□□□□□ -1.96
SIR4YDR227W CDC53Q12018 815 aaKnown RBP2.82□□□□□ -1.96
SIR4YDR227W ENT1Q12518 454 aa2.82□□□□□ -1.96
SIR4YDR227W TOM20P35180 183 aa2.82□□□□□ -1.96
SIR4YDR227W IPL1P38991 367 aa2.82□□□□□ -1.96
SIR4YDR227W PRP43P53131 767 aaKnown RBP2.82□□□□□ -1.96
SIR4YDR227W MSB4Q12317 492 aa2.82□□□□□ -1.96
SIR4YDR227W ZDS1P50111 915 aaKnown RBP2.81□□□□□ -1.96
SIR4YDR227W YOL057WQ08225 711 aa2.81□□□□□ -1.96
SIR4YDR227W MEC3Q02574 474 aa2.81□□□□□ -1.96
SIR4YDR227W RAD9P14737 1309 aa2.81□□□□□ -1.96
SIR4YDR227W INH1P01097 85 aa2.81□□□□□ -1.96
SIR4YDR227W YAP5P40574 245 aa2.81□□□□□ -1.96
SIR4YDR227W POL32P47110 350 aa2.81□□□□□ -1.96
SIR4YDR227W KAR1P11927 433 aa2.8□□□□□ -1.96
SIR4YDR227W RSM7P47150 247 aa2.8□□□□□ -1.96
SIR4YDR227W GIN4Q12263 1142 aa2.8□□□□□ -1.96
SIR4YDR227W SSF1P38789 453 aaPredicted RBP2.8□□□□□ -1.96
SIR4YDR227W GAL11P19659 1081 aa2.8□□□□□ -1.96
SIR4YDR227W YAP1801P38856 637 aa2.8□□□□□ -1.96
SIR4YDR227W CSN12P47130 423 aa2.8□□□□□ -1.96
SIR4YDR227W BUG1Q12191 341 aa2.8□□□□□ -1.96
SIR4YDR227W YGR161W-CQ3E744 92 aa2.8□□□□□ -1.96
SIR4YDR227W AI2P03876 854 aa2.79□□□□□ -1.96
SIR4YDR227W SIS2P36024 562 aa2.79□□□□□ -1.96
SIR4YDR227W ABZ1P37254 787 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms