RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	BBC1	P47068	1157 aa		5.14	□□□□□ -1.59
UPC2	YDR213W	ITC1	P53125	1264 aa		5.14	□□□□□ -1.59
UPC2	YDR213W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
UPC2	YDR213W	MCM2	P29469	868 aa		5.13	□□□□□ -1.59
UPC2	YDR213W	TPD3	P31383	635 aa		5.13	□□□□□ -1.59
UPC2	YDR213W	SAP155	P43612	1002 aa		5.13	□□□□□ -1.59
UPC2	YDR213W	YMR074C	Q04773	145 aa		5.13	□□□□□ -1.59
UPC2	YDR213W	SPE2	P21182	396 aa		5.12	□□□□□ -1.59
UPC2	YDR213W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.12	□□□□□ -1.59
UPC2	YDR213W	CAT8	P39113	1433 aa		5.12	□□□□□ -1.59
UPC2	YDR213W	IES2	P40154	320 aa		5.12	□□□□□ -1.59
UPC2	YDR213W	TPM2	P40414	161 aa		5.12	□□□□□ -1.59
UPC2	YDR213W	YIL092W	P40497	633 aa		5.12	□□□□□ -1.59
UPC2	YDR213W	IOC4	Q04213	475 aa		5.12	□□□□□ -1.59
UPC2	YDR213W	FPR4	Q06205	392 aa	Predicted RBP	5.12	□□□□□ -1.59
UPC2	YDR213W	AIM7	Q12156	149 aa		5.12	□□□□□ -1.59
UPC2	YDR213W	MLP1	Q02455	1875 aa	Known RBP	5.12	□□□□□ -1.59
UPC2	YDR213W	STS1	P38637	319 aa		5.11	□□□□□ -1.59
UPC2	YDR213W	GTT3	P39996	337 aa		5.11	□□□□□ -1.59
UPC2	YDR213W	CHZ1	P40019	153 aa	Predicted RBP	5.11	□□□□□ -1.59
UPC2	YDR213W	LCD1	Q04377	747 aa		5.11	□□□□□ -1.59
UPC2	YDR213W	SRS2	P12954	1174 aa		5.11	□□□□□ -1.59
UPC2	YDR213W	MFT1	P33441	392 aa	Known RBP	5.11	□□□□□ -1.59
UPC2	YDR213W	RTR1	P40084	226 aa	Predicted RBP	5.11	□□□□□ -1.59
UPC2	YDR213W	RRP46	P53256	223 aa	Predicted RBP	5.11	□□□□□ -1.59
UPC2	YDR213W	RPS0B	P46654	252 aa	Known RBP	5.1	□□□□□ -1.59
UPC2	YDR213W	NUP188	P52593	1655 aa	Known RBP	5.1	□□□□□ -1.59
UPC2	YDR213W	PKC1	P24583	1151 aa		5.1	□□□□□ -1.59
UPC2	YDR213W	ESL2	P36168	1195 aa		5.1	□□□□□ -1.59
UPC2	YDR213W	RKM3	P38222	552 aa		5.09	□□□□□ -1.59
UPC2	YDR213W	UTP13	Q05946	817 aa	Known RBP	5.09	□□□□□ -1.6
UPC2	YDR213W	ESC2	Q06340	456 aa		5.09	□□□□□ -1.6
UPC2	YDR213W	NOP8	Q08287	484 aa	Predicted RBP	5.09	□□□□□ -1.6
UPC2	YDR213W	PDR11	P40550	1411 aa		5.08	□□□□□ -1.6
UPC2	YDR213W	ILV3	P39522	585 aa	Known RBP	5.08	□□□□□ -1.6
UPC2	YDR213W	SMC3	P47037	1230 aa		5.08	□□□□□ -1.6
UPC2	YDR213W	LSP1	Q12230	341 aa	Known RBP	5.08	□□□□□ -1.6
UPC2	YDR213W	MAM3	Q12296	706 aa		5.08	□□□□□ -1.6
UPC2	YDR213W	MIC60	P36112	540 aa		5.08	□□□□□ -1.6
UPC2	YDR213W	MAK10	Q02197	733 aa		5.08	□□□□□ -1.6
UPC2	YDR213W	NPA3	P47122	385 aa		5.07	□□□□□ -1.6
UPC2	YDR213W	YML020W	Q03722	664 aa		5.07	□□□□□ -1.6
UPC2	YDR213W	COG8	Q04632	607 aa		5.07	□□□□□ -1.6
UPC2	YDR213W	THI22	Q06490	572 aa		5.07	□□□□□ -1.6
UPC2	YDR213W	NOP53	Q12080	455 aa	Known RBP	5.07	□□□□□ -1.6
UPC2	YDR213W	NUG1	P40010	520 aa	Known RBP	5.07	□□□□□ -1.6
UPC2	YDR213W	YDR090C	Q03193	310 aa		5.07	□□□□□ -1.6
UPC2	YDR213W	TFB3	Q03290	321 aa		5.07	□□□□□ -1.6
UPC2	YDR213W	RTC1	Q08281	1341 aa		5.07	□□□□□ -1.6
UPC2	YDR213W	MNR2	P35724	969 aa		5.06	□□□□□ -1.6
UPC2	YDR213W	DID4	P36108	232 aa		5.06	□□□□□ -1.6
UPC2	YDR213W	CLB1	P24868	471 aa		5.06	□□□□□ -1.6
UPC2	YDR213W	YAP3	P38749	330 aa		5.06	□□□□□ -1.6
UPC2	YDR213W	DSN1	P40568	576 aa		5.06	□□□□□ -1.6
UPC2	YDR213W	PAP2	P53632	584 aa	Known RBP	5.06	□□□□□ -1.6
UPC2	YDR213W	SSL2	Q00578	843 aa		5.06	□□□□□ -1.6
UPC2	YDR213W	HOS3	Q02959	697 aa	Known RBP	5.06	□□□□□ -1.6
UPC2	YDR213W	TAF8	Q03750	510 aa		5.06	□□□□□ -1.6
UPC2	YDR213W	VPS20	Q04272	221 aa		5.06	□□□□□ -1.6
UPC2	YDR213W	RVS167	P39743	482 aa	Known RBP	5.05	□□□□□ -1.6
UPC2	YDR213W	SFI1	Q12369	946 aa		5.05	□□□□□ -1.6
UPC2	YDR213W	YSP2	Q06681	1438 aa		5.05	□□□□□ -1.6
UPC2	YDR213W	LTV1	P34078	463 aa		5.05	□□□□□ -1.6
UPC2	YDR213W	MET10	P39692	1035 aa		5.05	□□□□□ -1.6
UPC2	YDR213W	TIM50	Q02776	476 aa		5.05	□□□□□ -1.6
UPC2	YDR213W	RTT109	Q07794	436 aa		5.05	□□□□□ -1.6
UPC2	YDR213W	APC11	Q12157	165 aa		5.05	□□□□□ -1.6
UPC2	YDR213W	COX6	P00427	148 aa		5.04	□□□□□ -1.6
UPC2	YDR213W	TRP5	P00931	707 aa	Known RBP	5.04	□□□□□ -1.6
UPC2	YDR213W	PRD1	P25375	712 aa		5.04	□□□□□ -1.6
UPC2	YDR213W	DLD1	P32891	587 aa		5.04	□□□□□ -1.6
UPC2	YDR213W	BRN1	P38170	754 aa		5.04	□□□□□ -1.6
UPC2	YDR213W	RFC1	P38630	861 aa	Known RBP	5.04	□□□□□ -1.6
UPC2	YDR213W	FKH1	P40466	484 aa		5.04	□□□□□ -1.6
UPC2	YDR213W	REF2	P42073	533 aa	Predicted RBP	5.04	□□□□□ -1.6
UPC2	YDR213W	CIR1	P42940	261 aa		5.04	□□□□□ -1.6
UPC2	YDR213W	SUB2	Q07478	446 aa	Known RBP	5.04	□□□□□ -1.6
UPC2	YDR213W	RAV1	P47104	1357 aa		5.04	□□□□□ -1.6
UPC2	YDR213W	GDT1	P38301	280 aa	Predicted RBP	5.04	□□□□□ -1.6
UPC2	YDR213W	NUP145	P49687	1317 aa		5.04	□□□□□ -1.6
UPC2	YDR213W	DEP1	P31385	405 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	RPN12	P32496	274 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	HXT13	P39924	564 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	SCY1	P53009	804 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	HAP5	Q02516	242 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	NKP2	Q06162	153 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	CTI6	Q08923	506 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	HXT17	P53631	564 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	CYC8	P14922	966 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	MED8	P38304	223 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	RRT14	P40470	206 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	HEF3	P53978	1044 aa	Known RBP	5.03	□□□□□ -1.6
UPC2	YDR213W	DOS2	P54858	310 aa		5.03	□□□□□ -1.6
UPC2	YDR213W	PSK1	P31374	1356 aa		5.02	□□□□□ -1.61
UPC2	YDR213W	KTR1	P27810	393 aa	Known RBP	5.02	□□□□□ -1.61
UPC2	YDR213W	UBP14	P38237	781 aa	Known RBP	5.02	□□□□□ -1.61
UPC2	YDR213W	ECM1	P39715	212 aa		5.02	□□□□□ -1.61
UPC2	YDR213W	RPN7	Q06103	429 aa	Known RBP	5.02	□□□□□ -1.61
UPC2	YDR213W	BMS1	Q08965	1183 aa	Known RBP	5.02	□□□□□ -1.61
UPC2	YDR213W	NOP14	Q99207	810 aa	Known RBP	5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms