RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C APP1P53933 587 aa6.41□□□□□ -1.38
ASM4YDL088C ITT1Q04638 464 aa6.41□□□□□ -1.38
ASM4YDL088C TEC1P18412 486 aa6.4□□□□□ -1.39
ASM4YDL088C RGA1P39083 1007 aa6.4□□□□□ -1.39
ASM4YDL088C FIG4P42837 879 aa6.4□□□□□ -1.39
ASM4YDL088C PTK2P47116 818 aaKnown RBP6.4□□□□□ -1.39
ASM4YDL088C RTT106P40161 455 aa6.39□□□□□ -1.39
ASM4YDL088C BRL1P38770 471 aa6.38□□□□□ -1.39
ASM4YDL088C LCB5Q06147 687 aaKnown RBP6.38□□□□□ -1.39
ASM4YDL088C MAK16P10962 306 aaPredicted RBP6.37□□□□□ -1.39
ASM4YDL088C HPC2Q01448 625 aa6.36□□□□□ -1.39
ASM4YDL088C YLR346CQ06139 101 aa6.36□□□□□ -1.39
ASM4YDL088C YPL062WQ02781 134 aa6.35□□□□□ -1.39
ASM4YDL088C YBL086CP38177 466 aa6.35□□□□□ -1.39
ASM4YDL088C YBL036CP38197 257 aa6.35□□□□□ -1.39
ASM4YDL088C EMW1P42842 904 aaKnown RBP6.35□□□□□ -1.39
ASM4YDL088C ARG82P07250 355 aa6.34□□□□□ -1.39
ASM4YDL088C GUT2P32191 649 aa6.34□□□□□ -1.39
ASM4YDL088C MKS1P34072 584 aa6.33□□□□□ -1.4
ASM4YDL088C CSE4P36012 229 aa6.33□□□□□ -1.4
ASM4YDL088C NUP85P46673 744 aa6.33□□□□□ -1.4
ASM4YDL088C TFB3Q03290 321 aa6.33□□□□□ -1.4
ASM4YDL088C NAF1P53919 492 aaKnown RBP6.31□□□□□ -1.4
ASM4YDL088C OPT2Q06593 877 aa6.31□□□□□ -1.4
ASM4YDL088C AAD14P42884 376 aa6.31□□□□□ -1.4
ASM4YDL088C STE20Q03497 939 aaKnown RBP6.31□□□□□ -1.4
ASM4YDL088C DFG5Q05031 458 aa6.3□□□□□ -1.4
ASM4YDL088C LSC2P53312 427 aa6.29□□□□□ -1.4
ASM4YDL088C YPR084WQ06821 456 aa6.29□□□□□ -1.4
ASM4YDL088C MIP1P15801 1254 aa6.28□□□□□ -1.4
ASM4YDL088C PKC1P24583 1151 aa6.28□□□□□ -1.4
ASM4YDL088C SPT5P27692 1063 aaKnown RBP6.28□□□□□ -1.4
ASM4YDL088C BDS1Q08347 646 aa6.28□□□□□ -1.4
ASM4YDL088C DLD1P32891 587 aa6.27□□□□□ -1.41
ASM4YDL088C SCW11P53189 542 aa6.27□□□□□ -1.41
ASM4YDL088C CAF120P53836 1060 aa6.27□□□□□ -1.41
ASM4YDL088C ATG20Q07528 640 aa6.27□□□□□ -1.41
ASM4YDL088C FBP26P32604 452 aa6.26□□□□□ -1.41
ASM4YDL088C GLY1P37303 387 aaKnown RBP6.26□□□□□ -1.41
ASM4YDL088C FRA1Q07825 749 aa6.26□□□□□ -1.41
ASM4YDL088C ISF1P32488 338 aa6.25□□□□□ -1.41
ASM4YDL088C EMP47P43555 445 aa6.25□□□□□ -1.41
ASM4YDL088C UBP2Q01476 1272 aa6.25□□□□□ -1.41
ASM4YDL088C YDJ1P25491 409 aaKnown RBP6.24□□□□□ -1.41
ASM4YDL088C MCM16Q12262 181 aa6.24□□□□□ -1.41
ASM4YDL088C YJR098CP47139 656 aa6.23□□□□□ -1.41
ASM4YDL088C HGH1P48362 394 aaKnown RBP6.23□□□□□ -1.41
ASM4YDL088C YDL176WQ12027 708 aa6.23□□□□□ -1.41
ASM4YDL088C TCB1Q12466 1186 aa6.23□□□□□ -1.41
ASM4YDL088C MRX12P47084 519 aa6.22□□□□□ -1.41
ASM4YDL088C ISU1Q03020 165 aa6.22□□□□□ -1.41
ASM4YDL088C RPP2BP02400 110 aaKnown RBP6.21□□□□□ -1.42
ASM4YDL088C STE6P12866 1290 aa6.21□□□□□ -1.42
ASM4YDL088C ACO2P39533 789 aa6.21□□□□□ -1.42
ASM4YDL088C YNL108CP53929 270 aa6.21□□□□□ -1.42
ASM4YDL088C TY1A-BLQ12266 440 aa6.21□□□□□ -1.42
ASM4YDL088C BIO2P32451 375 aa6.2□□□□□ -1.42
ASM4YDL088C DLD3P39976 496 aaKnown RBP6.2□□□□□ -1.42
ASM4YDL088C YJL007CP47080 104 aa6.2□□□□□ -1.42
ASM4YDL088C YPP1P46951 817 aa6.19□□□□□ -1.42
ASM4YDL088C ISR1Q06098 443 aaKnown RBP6.19□□□□□ -1.42
ASM4YDL088C YIR007WP40566 764 aa6.18□□□□□ -1.42
ASM4YDL088C DAT1P13483 248 aaKnown RBP6.17□□□□□ -1.42
ASM4YDL088C LEO1P38439 464 aa6.17□□□□□ -1.42
ASM4YDL088C ATG3P40344 310 aa6.17□□□□□ -1.42
ASM4YDL088C ENO2P00925 437 aaKnown RBP6.15□□□□□ -1.42
ASM4YDL088C OSH7P38755 437 aa6.15□□□□□ -1.42
ASM4YDL088C SUP45P12385 437 aaKnown RBP6.14□□□□□ -1.43
ASM4YDL088C UTR2P32623 467 aa6.14□□□□□ -1.43
ASM4YDL088C SOH1P38633 127 aa6.14□□□□□ -1.43
ASM4YDL088C TBS1P38114 1094 aa6.14□□□□□ -1.43
ASM4YDL088C RPL34BP40525 121 aaKnown RBP6.14□□□□□ -1.43
ASM4YDL088C YGR035CP53222 116 aa6.14□□□□□ -1.43
ASM4YDL088C APL6P46682 809 aa6.13□□□□□ -1.43
ASM4YDL088C WTM2Q12206 467 aa6.13□□□□□ -1.43
ASM4YDL088C BIM1P40013 344 aa6.12□□□□□ -1.43
ASM4YDL088C ROG3P43602 733 aa6.12□□□□□ -1.43
ASM4YDL088C SPT2P06843 333 aaPredicted RBP6.1□□□□□ -1.43
ASM4YDL088C HAL5P38970 855 aaKnown RBP6.1□□□□□ -1.43
ASM4YDL088C UTP13Q05946 817 aaKnown RBP6.1□□□□□ -1.43
ASM4YDL088C ATG32P40458 529 aa6.1□□□□□ -1.43
ASM4YDL088C TY1A-MR1Q04215 440 aa6.1□□□□□ -1.43
ASM4YDL088C RIM21P48565 533 aa6.09□□□□□ -1.43
ASM4YDL088C HPF1Q05164 967 aa6.09□□□□□ -1.43
ASM4YDL088C RTG2P32608 588 aaKnown RBP6.08□□□□□ -1.44
ASM4YDL088C UTP7P40055 554 aaKnown RBP6.08□□□□□ -1.44
ASM4YDL088C VTC4P47075 721 aa6.08□□□□□ -1.44
ASM4YDL088C HDA3Q06623 655 aa6.08□□□□□ -1.44
ASM4YDL088C CDC19P00549 500 aaKnown RBP6.07□□□□□ -1.44
ASM4YDL088C TIF1P10081 395 aaKnown RBP6.07□□□□□ -1.44
ASM4YDL088C DAL1P32375 460 aa6.07□□□□□ -1.44
ASM4YDL088C ALA1P40825 983 aaKnown RBP6.07□□□□□ -1.44
ASM4YDL088C TRK2P28584 889 aa6.06□□□□□ -1.44
ASM4YDL088C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
ASM4YDL088C ENO1P00924 437 aaKnown RBP6.05□□□□□ -1.44
ASM4YDL088C AHP1P38013 176 aaKnown RBP6.05□□□□□ -1.44
ASM4YDL088C SSN3P39073 555 aa6.04□□□□□ -1.44
ASM4YDL088C SLX8P40072 274 aa6.04□□□□□ -1.44
ASM4YDL088C MSN5P52918 1224 aa6.04□□□□□ -1.44
ASM4YDL088C NAM8Q00539 523 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms