RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W TOM71P38825 639 aaKnown RBP2.34□□□□□ -2.03
USO1YDL058W EMP65P40085 556 aa2.34□□□□□ -2.03
USO1YDL058W AAD16Q02895 342 aa2.34□□□□□ -2.03
USO1YDL058W PSE1P32337 1089 aaKnown RBP2.34□□□□□ -2.03
USO1YDL058W RPN2P32565 945 aaKnown RBP2.34□□□□□ -2.03
USO1YDL058W YML6P51998 286 aa2.34□□□□□ -2.03
USO1YDL058W PSD2P53037 1138 aaKnown RBP2.34□□□□□ -2.03
USO1YDL058W RRP17Q04031 235 aaPredicted RBP2.34□□□□□ -2.03
USO1YDL058W YMR111CQ04461 462 aaPredicted RBP2.34□□□□□ -2.03
USO1YDL058W ETT1Q08421 412 aaKnown RBP2.34□□□□□ -2.03
USO1YDL058W RPL17AP05740 184 aaKnown RBP2.34□□□□□ -2.04
USO1YDL058W SWI6P09959 803 aa2.34□□□□□ -2.04
USO1YDL058W RPC82P32349 654 aa2.34□□□□□ -2.04
USO1YDL058W RTS1P38903 757 aa2.34□□□□□ -2.04
USO1YDL058W BFR1P38934 470 aaKnown RBP RIP-Chip data2.34□□□□□ -2.04not detected
USO1YDL058W RGA1P39083 1007 aa2.34□□□□□ -2.04
USO1YDL058W RPL17BP46990 184 aaKnown RBP2.34□□□□□ -2.04
USO1YDL058W RTS3P53289 263 aa2.34□□□□□ -2.04
USO1YDL058W EIS1Q05050 843 aaKnown RBP2.34□□□□□ -2.04
USO1YDL058W RPP2AP05319 106 aaKnown RBP2.34□□□□□ -2.04
USO1YDL058W RTG3P38165 486 aa2.34□□□□□ -2.04
USO1YDL058W ETP1P38748 585 aaKnown RBP2.34□□□□□ -2.04
USO1YDL058W ACF4P47129 309 aa2.34□□□□□ -2.04
USO1YDL058W RTF1P53064 558 aa2.34□□□□□ -2.04
USO1YDL058W IOC4Q04213 475 aa2.34□□□□□ -2.04
USO1YDL058W TOM70P07213 617 aaKnown RBP2.33□□□□□ -2.04
USO1YDL058W SPC72P39723 622 aa2.33□□□□□ -2.04
USO1YDL058W FAF1P40546 346 aaPredicted RBP2.33□□□□□ -2.04
USO1YDL058W YIL002W-AQ3E7Z5 69 aa2.33□□□□□ -2.04
USO1YDL058W RPN11P43588 306 aaKnown RBP2.33□□□□□ -2.04
USO1YDL058W FYV8P46949 817 aaKnown RBP2.33□□□□□ -2.04
USO1YDL058W CUS1Q02554 436 aaPredicted RBP2.33□□□□□ -2.04
USO1YDL058W KAR2P16474 682 aaKnown RBP2.33□□□□□ -2.04
USO1YDL058W POL4P25615 582 aa2.33□□□□□ -2.04
USO1YDL058W SEG2P34250 1132 aa2.33□□□□□ -2.04
USO1YDL058W MUM2P38236 366 aa2.33□□□□□ -2.04
USO1YDL058W BUD27P43573 796 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
USO1YDL058W GPN2Q08726 347 aaPredicted RBP2.33□□□□□ -2.04
USO1YDL058W CIR2Q08822 631 aa2.33□□□□□ -2.04
USO1YDL058W SKS1Q12505 502 aa2.33□□□□□ -2.04
USO1YDL058W SPA2P23201 1466 aaKnown RBP2.33□□□□□ -2.04
USO1YDL058W RBK1P25332 333 aa2.33□□□□□ -2.04
USO1YDL058W LTV1P34078 463 aa2.33□□□□□ -2.04
USO1YDL058W YFL034WP43564 1073 aa2.33□□□□□ -2.04
USO1YDL058W ENV11P53246 860 aa2.33□□□□□ -2.04
USO1YDL058W BNI4P53858 892 aa2.33□□□□□ -2.04
USO1YDL058W YML020WQ03722 664 aa2.33□□□□□ -2.04
USO1YDL058W SKI3P17883 1432 aaKnown RBP2.33□□□□□ -2.04
USO1YDL058W SES1P07284 462 aaKnown RBP2.32□□□□□ -2.04
USO1YDL058W MAK11P20484 414 aaKnown RBP2.32□□□□□ -2.04
USO1YDL058W CNS1P33313 385 aa2.32□□□□□ -2.04
USO1YDL058W VPS41P38959 992 aa2.32□□□□□ -2.04
USO1YDL058W LSG1P53145 640 aaKnown RBP2.32□□□□□ -2.04
USO1YDL058W SDA1P53313 767 aaKnown RBP2.32□□□□□ -2.04
USO1YDL058W SXM1Q04175 944 aaKnown RBP2.32□□□□□ -2.04
USO1YDL058W TY4B-PA0A0B7P3V8 1104 aa2.32□□□□□ -2.04
USO1YDL058W SSP120P39931 234 aaKnown RBP2.32□□□□□ -2.04
USO1YDL058W TY4A-HQ6Q5P6 413 aa2.32□□□□□ -2.04
USO1YDL058W YKR023WP36119 530 aaKnown RBP2.32□□□□□ -2.04
USO1YDL058W KRE33P53914 1056 aaKnown RBP2.32□□□□□ -2.04
USO1YDL058W SSO1P32867 290 aa2.32□□□□□ -2.04
USO1YDL058W VPS51P36116 164 aa2.32□□□□□ -2.04
USO1YDL058W SHE10P53075 577 aa2.32□□□□□ -2.04
USO1YDL058W RRP15Q06511 250 aaPredicted RBP2.32□□□□□ -2.04
USO1YDL058W SEC2P17065 759 aa2.32□□□□□ -2.04
USO1YDL058W MSH4P40965 878 aaPredicted RBP2.32□□□□□ -2.04
USO1YDL058W MAM3Q12296 706 aa2.32□□□□□ -2.04
USO1YDL058W UBP1P25037 809 aa2.31□□□□□ -2.04
USO1YDL058W CBF2P32504 956 aa2.31□□□□□ -2.04
USO1YDL058W SSZ1P38788 538 aaKnown RBP2.31□□□□□ -2.04
USO1YDL058W ENP2P48234 707 aaKnown RBP2.31□□□□□ -2.04
USO1YDL058W ESF1Q06344 628 aaKnown RBP2.31□□□□□ -2.04
USO1YDL058W BMS1Q08965 1183 aaKnown RBP2.31□□□□□ -2.04
USO1YDL058W ACE2P21192 770 aa2.31□□□□□ -2.04
USO1YDL058W VPS45P38932 577 aa2.31□□□□□ -2.04
USO1YDL058W YNL247WP53852 767 aaKnown RBP2.31□□□□□ -2.04
USO1YDL058W RRP6Q12149 733 aaKnown RBP2.31□□□□□ -2.04
USO1YDL058W NCB2Q92317 146 aa2.31□□□□□ -2.04
USO1YDL058W VMA2P16140 517 aaKnown RBP2.31□□□□□ -2.04
USO1YDL058W MSH2P25847 964 aa2.31□□□□□ -2.04
USO1YDL058W GCD6P32501 712 aaKnown RBP2.31□□□□□ -2.04
USO1YDL058W VPS35P34110 944 aa2.31□□□□□ -2.04
USO1YDL058W CHZ1P40019 153 aaPredicted RBP2.31□□□□□ -2.04
USO1YDL058W RPN4Q03465 531 aa2.31□□□□□ -2.04
USO1YDL058W YLR271WQ06152 274 aa2.31□□□□□ -2.04
USO1YDL058W MSH1P25846 959 aa2.31□□□□□ -2.04
USO1YDL058W EFT1P32324 842 aaKnown RBP2.31□□□□□ -2.04
USO1YDL058W RRF1P38771 230 aa2.31□□□□□ -2.04
USO1YDL058W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
USO1YDL058W LAM5P43560 674 aa2.31□□□□□ -2.04
USO1YDL058W DAS1P47005 663 aa2.31□□□□□ -2.04
USO1YDL058W GIM3P53900 129 aa2.31□□□□□ -2.04
USO1YDL058W PTA1Q01329 785 aaPredicted RBP2.31□□□□□ -2.04
USO1YDL058W UBX5Q06682 500 aa2.31□□□□□ -2.04
USO1YDL058W NBL1Q3E7Y6 73 aa2.31□□□□□ -2.04
USO1YDL058W ARL1P38116 183 aaKnown RBP2.3□□□□□ -2.04
USO1YDL058W MTW1P39731 289 aa2.3□□□□□ -2.04
USO1YDL058W MLH2Q07980 695 aa2.3□□□□□ -2.04
USO1YDL058W PPM2Q08282 695 aa2.3□□□□□ -2.04
USO1YDL058W RUP1Q12242 671 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms