RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C SLN1P39928 1220 aaPredicted RBP3.35□□□□□ -1.87
RIF1YBR275C XRS2P33301 854 aa3.35□□□□□ -1.87
RIF1YBR275C SAK1P38990 1142 aa3.35□□□□□ -1.87
RIF1YBR275C MSB3P48566 633 aaPredicted RBP3.35□□□□□ -1.87
RIF1YBR275C YOL098CQ12496 1037 aa3.35□□□□□ -1.87
RIF1YBR275C NIP100P33420 868 aa3.35□□□□□ -1.87
RIF1YBR275C BNI4P53858 892 aa3.35□□□□□ -1.87
RIF1YBR275C YKL023WP36103 277 aaKnown RBP3.35□□□□□ -1.87
RIF1YBR275C ERC1P38767 581 aa3.35□□□□□ -1.87
RIF1YBR275C OSW7P43611 510 aa3.35□□□□□ -1.87
RIF1YBR275C JJJ2P46997 583 aa3.35□□□□□ -1.87
RIF1YBR275C YLL058WQ12198 575 aa3.35□□□□□ -1.87
RIF1YBR275C SPO21Q12411 609 aa3.34□□□□□ -1.87
RIF1YBR275C FRD1P32614 470 aaKnown RBP3.34□□□□□ -1.87
RIF1YBR275C DOT5P40553 215 aa3.34□□□□□ -1.87
RIF1YBR275C CWC15Q03772 175 aaKnown RBP3.34□□□□□ -1.87
RIF1YBR275C GRX6Q12438 231 aa3.34□□□□□ -1.87
RIF1YBR275C SET1P38827 1080 aaKnown RBP3.34□□□□□ -1.87
RIF1YBR275C BUD2P33314 1104 aa3.34□□□□□ -1.88
RIF1YBR275C BRR1Q99177 341 aaPredicted RBP3.34□□□□□ -1.88
RIF1YBR275C GLC3P32775 704 aa3.34□□□□□ -1.88
RIF1YBR275C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.34□□□□□ -1.88not detected
RIF1YBR275C SPT15P13393 240 aaKnown RBP3.33□□□□□ -1.88
RIF1YBR275C SCJ1P25303 377 aa3.33□□□□□ -1.88
RIF1YBR275C TFC4P33339 1025 aa3.33□□□□□ -1.88
RIF1YBR275C LYS14P40971 790 aa3.33□□□□□ -1.88
RIF1YBR275C YJR107WP47145 328 aa3.33□□□□□ -1.88
RIF1YBR275C ITC1P53125 1264 aa3.33□□□□□ -1.88
RIF1YBR275C YBP2P53169 641 aa3.33□□□□□ -1.88
RIF1YBR275C SKI3P17883 1432 aaKnown RBP3.33□□□□□ -1.88
RIF1YBR275C RPC31P17890 251 aa3.33□□□□□ -1.88
RIF1YBR275C GIP1P38229 639 aa3.33□□□□□ -1.88
RIF1YBR275C ATG3P40344 310 aa3.33□□□□□ -1.88
RIF1YBR275C TPM2P40414 161 aa3.33□□□□□ -1.88
RIF1YBR275C CLF1Q12309 687 aaPredicted RBP3.33□□□□□ -1.88
RIF1YBR275C ENT1Q12518 454 aa3.33□□□□□ -1.88
RIF1YBR275C SAS3P34218 831 aa3.33□□□□□ -1.88
RIF1YBR275C YJL070CP40361 888 aa3.33□□□□□ -1.88
RIF1YBR275C SPO71Q03868 1245 aa3.33□□□□□ -1.88
RIF1YBR275C RTC5Q12108 567 aaKnown RBP3.33□□□□□ -1.88
RIF1YBR275C GAL11P19659 1081 aa3.33□□□□□ -1.88
RIF1YBR275C SSF1P38789 453 aaPredicted RBP3.33□□□□□ -1.88
RIF1YBR275C MAD1P40957 749 aa3.33□□□□□ -1.88
RIF1YBR275C VHS3Q08438 674 aa3.33□□□□□ -1.88
RIF1YBR275C AAP1P37898 856 aaKnown RBP3.32□□□□□ -1.88
RIF1YBR275C VPS41P38959 992 aa3.32□□□□□ -1.88
RIF1YBR275C RAT1Q02792 1006 aaKnown RBP3.32□□□□□ -1.88
RIF1YBR275C VAM6Q07468 1049 aa3.32□□□□□ -1.88
RIF1YBR275C VMA4P22203 233 aaKnown RBP3.32□□□□□ -1.88
RIF1YBR275C RXT2P38255 430 aa3.32□□□□□ -1.88
RIF1YBR275C LYS5P50113 272 aa3.32□□□□□ -1.88
RIF1YBR275C JIP5Q06214 492 aaPredicted RBP3.32□□□□□ -1.88
RIF1YBR275C TIF6Q12522 245 aaKnown RBP3.32□□□□□ -1.88
RIF1YBR275C BIO2P32451 375 aa3.32□□□□□ -1.88
RIF1YBR275C YEL043WP32618 956 aa3.32□□□□□ -1.88
RIF1YBR275C VPS35P34110 944 aa3.32□□□□□ -1.88
RIF1YBR275C TPS3P38426 1054 aaKnown RBP3.32□□□□□ -1.88
RIF1YBR275C VHR2P40041 505 aa3.32□□□□□ -1.88
RIF1YBR275C IES2P40154 320 aa3.32□□□□□ -1.88
RIF1YBR275C VID27P40157 782 aa3.32□□□□□ -1.88
RIF1YBR275C YPP1P46951 817 aa3.32□□□□□ -1.88
RIF1YBR275C TFB2Q02939 513 aa3.32□□□□□ -1.88
RIF1YBR275C SSP1P38871 571 aa3.32□□□□□ -1.88
RIF1YBR275C BDP1P46678 594 aa3.32□□□□□ -1.88
RIF1YBR275C COP1P53622 1201 aaKnown RBP3.32□□□□□ -1.88
RIF1YBR275C ARP5P53946 755 aa3.32□□□□□ -1.88
RIF1YBR275C CIK1Q01649 594 aa3.32□□□□□ -1.88
RIF1YBR275C CEF1Q03654 590 aaPredicted RBP3.32□□□□□ -1.88
RIF1YBR275C RAD9P14737 1309 aa3.32□□□□□ -1.88
RIF1YBR275C CDC34P14682 295 aa3.32□□□□□ -1.88
RIF1YBR275C AFG2P32794 780 aa3.32□□□□□ -1.88
RIF1YBR275C RTS1P38903 757 aa3.32□□□□□ -1.88
RIF1YBR275C YTA6P40328 754 aa3.32□□□□□ -1.88
RIF1YBR275C SHQ1P40486 507 aaPredicted RBP3.32□□□□□ -1.88
RIF1YBR275C TFB3Q03290 321 aa3.32□□□□□ -1.88
RIF1YBR275C VPS64Q03944 604 aa3.32□□□□□ -1.88
RIF1YBR275C DIB1Q06819 143 aaPredicted RBP3.32□□□□□ -1.88
RIF1YBR275C CHO2P05374 869 aaKnown RBP3.31□□□□□ -1.88
RIF1YBR275C TAF13P11747 167 aa3.31□□□□□ -1.88
RIF1YBR275C VAB2P40003 282 aa3.31□□□□□ -1.88
RIF1YBR275C NSE3Q05541 303 aa3.31□□□□□ -1.88
RIF1YBR275C YLR271WQ06152 274 aa3.31□□□□□ -1.88
RIF1YBR275C KRS1P15180 591 aaKnown RBP3.31□□□□□ -1.88
RIF1YBR275C SPE2P21182 396 aa3.31□□□□□ -1.88
RIF1YBR275C CDC48P25694 835 aaKnown RBP3.31□□□□□ -1.88
RIF1YBR275C YLR257WQ06146 321 aaKnown RBP3.31□□□□□ -1.88
RIF1YBR275C TCB1Q12466 1186 aa3.31□□□□□ -1.88
RIF1YBR275C FAA4P47912 694 aaKnown RBP3.31□□□□□ -1.88
RIF1YBR275C UBP15P50101 1230 aa3.31□□□□□ -1.88
RIF1YBR275C ATG19P35193 415 aa3.31□□□□□ -1.88
RIF1YBR275C BBC1P47068 1157 aa3.31□□□□□ -1.88
RIF1YBR275C SRC1Q03707 834 aa3.31□□□□□ -1.88
RIF1YBR275C OMS1Q06668 471 aa3.31□□□□□ -1.88
RIF1YBR275C YCG1Q06680 1035 aa3.31□□□□□ -1.88
RIF1YBR275C SDH2P21801 266 aa3.31□□□□□ -1.88
RIF1YBR275C DLD1P32891 587 aa3.31□□□□□ -1.88
RIF1YBR275C MIC60P36112 540 aa3.31□□□□□ -1.88
RIF1YBR275C BZZ1P38822 633 aa3.31□□□□□ -1.88
RIF1YBR275C MMF1P40185 145 aaKnown RBP3.31□□□□□ -1.88
RIF1YBR275C IRC23Q08416 157 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms