RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C BUD4P47136 1447 aa3.72□□□□□ -1.81
CLN3YAL040C SCJ1P25303 377 aa3.71□□□□□ -1.82
CLN3YAL040C YJR115WP47152 169 aa3.71□□□□□ -1.82
CLN3YAL040C MSB3P48566 633 aaPredicted RBP3.71□□□□□ -1.82
CLN3YAL040C LCB5Q06147 687 aaKnown RBP3.71□□□□□ -1.82
CLN3YAL040C GLC3P32775 704 aa3.7□□□□□ -1.82
CLN3YAL040C ECM5Q03214 1411 aa3.7□□□□□ -1.82
CLN3YAL040C IXR1P33417 597 aa3.7□□□□□ -1.82
CLN3YAL040C PEP1P32319 1579 aa3.69□□□□□ -1.82
CLN3YAL040C ESS1P22696 170 aa3.69□□□□□ -1.82
CLN3YAL040C UGA3P26370 528 aa3.69□□□□□ -1.82
CLN3YAL040C RTT106P40161 455 aa3.69□□□□□ -1.82
CLN3YAL040C AIM7Q12156 149 aa3.68□□□□□ -1.82
CLN3YAL040C SRF1Q12516 437 aa3.68□□□□□ -1.82
CLN3YAL040C MDS3P53094 1487 aa3.68□□□□□ -1.82
CLN3YAL040C MRT4P33201 236 aaKnown RBP3.67□□□□□ -1.82
CLN3YAL040C MYO2P19524 1574 aaKnown RBP3.67□□□□□ -1.82
CLN3YAL040C PTK2P47116 818 aaKnown RBP3.67□□□□□ -1.82
CLN3YAL040C YLR346CQ06139 101 aa3.67□□□□□ -1.82
CLN3YAL040C YJU3P28321 313 aa3.65□□□□□ -1.82
CLN3YAL040C LEO1P38439 464 aa3.65□□□□□ -1.82
CLN3YAL040C PKH3Q03306 898 aaPredicted RBP3.65□□□□□ -1.82
CLN3YAL040C TYW1Q08960 810 aaKnown RBP3.65□□□□□ -1.82
CLN3YAL040C SKI3P17883 1432 aaKnown RBP3.64□□□□□ -1.83
CLN3YAL040C VAC17P25591 423 aa3.64□□□□□ -1.83
CLN3YAL040C NUP85P46673 744 aa3.64□□□□□ -1.83
CLN3YAL040C YDL176WQ12027 708 aa3.64□□□□□ -1.83
CLN3YAL040C ARG8P18544 423 aa3.63□□□□□ -1.83
CLN3YAL040C RSC30P38781 883 aa3.63□□□□□ -1.83
CLN3YAL040C CSN12P47130 423 aa3.63□□□□□ -1.83
CLN3YAL040C ARG82P07250 355 aa3.62□□□□□ -1.83
CLN3YAL040C KTR1P27810 393 aaKnown RBP3.62□□□□□ -1.83
CLN3YAL040C GLY1P37303 387 aaKnown RBP3.62□□□□□ -1.83
CLN3YAL040C OPT2Q06593 877 aa3.62□□□□□ -1.83
CLN3YAL040C TY2B-LR1P0C2J3 1770 aa3.62□□□□□ -1.83
CLN3YAL040C TY2B-FP0CX63 1770 aa3.62□□□□□ -1.83
CLN3YAL040C TY2B-GR2P0CX64 1770 aa3.62□□□□□ -1.83
CLN3YAL040C TY2B-CP25384 1770 aa3.62□□□□□ -1.83
CLN3YAL040C TY2B-DR2Q03494 1770 aa3.62□□□□□ -1.83
CLN3YAL040C TY1B-DR1Q03855 1755 aa3.62□□□□□ -1.83
CLN3YAL040C TY2B-DR3Q07791 1770 aaKnown RBP3.62□□□□□ -1.83
CLN3YAL040C TY2B-OR1Q12113 1770 aa3.62□□□□□ -1.83
CLN3YAL040C TY2B-DR1Q12472 1770 aa3.62□□□□□ -1.83
CLN3YAL040C TY2B-OR2Q12501 1770 aa3.62□□□□□ -1.83
CLN3YAL040C YPK9Q12697 1472 aa3.62□□□□□ -1.83
CLN3YAL040C SCC2Q04002 1493 aa3.61□□□□□ -1.83
CLN3YAL040C YBL086CP38177 466 aa3.61□□□□□ -1.83
CLN3YAL040C ACO2P39533 789 aa3.61□□□□□ -1.83
CLN3YAL040C CAF120P53836 1060 aa3.61□□□□□ -1.83
CLN3YAL040C MIP1P15801 1254 aa3.6□□□□□ -1.83
CLN3YAL040C AAD14P42884 376 aa3.6□□□□□ -1.83
CLN3YAL040C SCW11P53189 542 aa3.6□□□□□ -1.83
CLN3YAL040C LSC2P53312 427 aa3.6□□□□□ -1.83
CLN3YAL040C MTC5Q03897 1148 aa3.6□□□□□ -1.83
CLN3YAL040C RAD59Q12223 238 aa3.6□□□□□ -1.83
CLN3YAL040C TY1B-DR3Q99231 1755 aa3.59□□□□□ -1.83
CLN3YAL040C SSA2P10592 639 aaKnown RBP3.59□□□□□ -1.83
CLN3YAL040C EMW1P42842 904 aaKnown RBP3.59□□□□□ -1.83
CLN3YAL040C FIG4P42837 879 aa3.58□□□□□ -1.84
CLN3YAL040C APP1P53933 587 aa3.58□□□□□ -1.84
CLN3YAL040C POL1P13382 1468 aa3.58□□□□□ -1.84
CLN3YAL040C RKR1Q04781 1562 aa3.58□□□□□ -1.84
CLN3YAL040C TY2B-BQ12491 1770 aa3.58□□□□□ -1.84
CLN3YAL040C BPT1P14772 1559 aa3.58□□□□□ -1.84
CLN3YAL040C STU1P38198 1513 aa3.58□□□□□ -1.84
CLN3YAL040C TEC1P18412 486 aa3.58□□□□□ -1.84
CLN3YAL040C UBP2Q01476 1272 aa3.58□□□□□ -1.84
CLN3YAL040C UFD4P33202 1483 aa3.57□□□□□ -1.84
CLN3YAL040C MKS1P34072 584 aa3.57□□□□□ -1.84
CLN3YAL040C LEU3P08638 886 aa3.56□□□□□ -1.84
CLN3YAL040C KIN1P13185 1064 aa3.56□□□□□ -1.84
CLN3YAL040C YGR035CP53222 116 aa3.56□□□□□ -1.84
CLN3YAL040C TY1A-BLQ12266 440 aa3.56□□□□□ -1.84
CLN3YAL040C YCF1P39109 1515 aaKnown RBP3.56□□□□□ -1.84
CLN3YAL040C RPO31P04051 1460 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-HO13535 1793 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-DR5P0C2I2 1755 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-DR6P0C2I3 1755 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-LR2P0C2I5 1755 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-LR3P0C2I6 1755 aaKnown RBP3.56□□□□□ -1.84
CLN3YAL040C TY1B-PR1P0C2I9 1755 aaKnown RBP3.56□□□□□ -1.84
CLN3YAL040C TY1B-PR2P0C2J0 1756 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-PR3P0C2J1 1755 aaKnown RBP3.56□□□□□ -1.84
CLN3YAL040C TY1B-JR1P47098 1755 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-ML2Q03434 1755 aaKnown RBP3.56□□□□□ -1.84
CLN3YAL040C TY1B-ER1Q03612 1755 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-ML1Q04711 1755 aaKnown RBP3.56□□□□□ -1.84
CLN3YAL040C TY1B-BRQ12193 1756 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-GR2Q12269 1755 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-OLQ12273 1755 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-GR3Q12316 1755 aa3.56□□□□□ -1.84
CLN3YAL040C TY1B-PLQ12414 1755 aaKnown RBP3.56□□□□□ -1.84
CLN3YAL040C TY1B-ORQ92393 1755 aa3.56□□□□□ -1.84
CLN3YAL040C YIR007WP40566 764 aa3.56□□□□□ -1.84
CLN3YAL040C YJR098CP47139 656 aa3.56□□□□□ -1.84
CLN3YAL040C ITT1Q04638 464 aa3.56□□□□□ -1.84
CLN3YAL040C DFG5Q05031 458 aa3.56□□□□□ -1.84
CLN3YAL040C MAK16P10962 306 aaPredicted RBP3.55□□□□□ -1.84
CLN3YAL040C GUT2P32191 649 aa3.55□□□□□ -1.84
CLN3YAL040C DLD1P32891 587 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms