RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeastyeast

Gene LDS1, Length 978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDS1YAL018C ATH1P48016 1211 aa8.13□□□□□ -1.11
LDS1YAL018C MHP1P43638 1398 aa8.12□□□□□ -1.11
LDS1YAL018C CPS1P27614 576 aa8.11□□□□□ -1.11
LDS1YAL018C SOL3P38858 249 aa8.1□□□□□ -1.11
LDS1YAL018C RCM1P53972 490 aa8.1□□□□□ -1.11
LDS1YAL018C SEC3P33332 1336 aaKnown RBP8.08□□□□□ -1.12
LDS1YAL018C CHL1P22516 861 aaPredicted RBP8.08□□□□□ -1.12
LDS1YAL018C PSK1P31374 1356 aa8.08□□□□□ -1.12
LDS1YAL018C PDS5Q04264 1277 aa8.07□□□□□ -1.12
LDS1YAL018C PPH3P32345 308 aa8.06□□□□□ -1.12
LDS1YAL018C YDR344CQ05510 147 aa8.06□□□□□ -1.12
LDS1YAL018C LEU2P04173 364 aaPredicted RBP8.05□□□□□ -1.12
LDS1YAL018C BCK2P33306 851 aa8.05□□□□□ -1.12
LDS1YAL018C PRE3P38624 215 aa8.05□□□□□ -1.12
LDS1YAL018C MTR4P47047 1073 aaKnown RBP8.05□□□□□ -1.12
LDS1YAL018C RGA2Q06407 1009 aa8.04□□□□□ -1.12
LDS1YAL018C ILV3P39522 585 aaKnown RBP8.03□□□□□ -1.12
LDS1YAL018C PML39Q03760 334 aa8.03□□□□□ -1.12
LDS1YAL018C NOP53Q12080 455 aaKnown RBP8.02□□□□□ -1.13
LDS1YAL018C PRP43P53131 767 aaKnown RBP8□□□□□ -1.13
LDS1YAL018C ADE6P38972 1358 aaKnown RBP7.99□□□□□ -1.13
LDS1YAL018C MPH3P0CE00 602 aa7.99□□□□□ -1.13
LDS1YAL018C AI4P03878 556 aa7.98□□□□□ -1.13
LDS1YAL018C RTF1P53064 558 aa7.98□□□□□ -1.13
LDS1YAL018C PDI1P17967 522 aaKnown RBP7.97□□□□□ -1.13
LDS1YAL018C MID1P41821 548 aa7.97□□□□□ -1.13
LDS1YAL018C USO1P25386 1790 aa7.97□□□□□ -1.13
LDS1YAL018C GRX4P32642 244 aa7.96□□□□□ -1.14
LDS1YAL018C YGR273CP53329 174 aa7.96□□□□□ -1.14
LDS1YAL018C TAP42Q04372 366 aa7.96□□□□□ -1.14
LDS1YAL018C CSE4P36012 229 aa7.95□□□□□ -1.14
LDS1YAL018C YML133CQ03099 1374 aa7.95□□□□□ -1.14
LDS1YAL018C YLL067CQ07888 1374 aa7.95□□□□□ -1.14
LDS1YAL018C YLL066CQ99208 1374 aa7.95□□□□□ -1.14
LDS1YAL018C PRP5P21372 849 aaPredicted RBP7.94□□□□□ -1.14
LDS1YAL018C PRP45P28004 379 aaPredicted RBP7.94□□□□□ -1.14
LDS1YAL018C ELP4Q02884 456 aaKnown RBP7.94□□□□□ -1.14
LDS1YAL018C RPS24AP0CX31 135 aaKnown RBP7.93□□□□□ -1.14
LDS1YAL018C RPS24BP0CX32 135 aaKnown RBP7.93□□□□□ -1.14
LDS1YAL018C SPT7P35177 1332 aa7.93□□□□□ -1.14
LDS1YAL018C IOC4Q04213 475 aa7.92□□□□□ -1.14
LDS1YAL018C VRP1P37370 817 aa7.91□□□□□ -1.14
LDS1YAL018C SET1P38827 1080 aaKnown RBP7.91□□□□□ -1.14
LDS1YAL018C KAR2P16474 682 aaKnown RBP7.9□□□□□ -1.14
LDS1YAL018C ENP1P38333 483 aaKnown RBP7.9□□□□□ -1.14
LDS1YAL018C ENT1Q12518 454 aa7.9□□□□□ -1.14
LDS1YAL018C ARH1P48360 493 aa7.89□□□□□ -1.15
LDS1YAL018C SLM3Q12093 417 aa7.88□□□□□ -1.15
LDS1YAL018C DPS1P04802 557 aaKnown RBP7.87□□□□□ -1.15
LDS1YAL018C TCB1Q12466 1186 aa7.87□□□□□ -1.15
LDS1YAL018C YEF3P16521 1044 aaKnown RBP7.86□□□□□ -1.15
LDS1YAL018C MSB3P48566 633 aaPredicted RBP7.86□□□□□ -1.15
LDS1YAL018C APP1P53933 587 aa7.86□□□□□ -1.15
LDS1YAL018C GAS4Q08271 471 aa7.86□□□□□ -1.15
LDS1YAL018C ENV9Q08651 330 aa7.86□□□□□ -1.15
LDS1YAL018C LEU3P08638 886 aa7.85□□□□□ -1.15
LDS1YAL018C XDJ1P39102 459 aa7.85□□□□□ -1.15
LDS1YAL018C SLI15P38283 698 aa7.84□□□□□ -1.15
LDS1YAL018C PEX29Q03370 554 aa7.84□□□□□ -1.15
LDS1YAL018C HIM1Q06674 414 aa7.84□□□□□ -1.15
LDS1YAL018C PAP2P53632 584 aaKnown RBP7.83□□□□□ -1.16
LDS1YAL018C MPC54Q08550 464 aa7.83□□□□□ -1.16
LDS1YAL018C KEX1P09620 729 aa7.82□□□□□ -1.16
LDS1YAL018C TRK1P12685 1235 aa7.82□□□□□ -1.16
LDS1YAL018C IMH1Q06704 911 aaKnown RBP7.82□□□□□ -1.16
LDS1YAL018C RPO41P13433 1351 aaKnown RBP7.82□□□□□ -1.16
LDS1YAL018C AUS1Q08409 1394 aa7.82□□□□□ -1.16
LDS1YAL018C RSF2P46974 1380 aa7.81□□□□□ -1.16
LDS1YAL018C XKS1P42826 600 aa7.8□□□□□ -1.16
LDS1YAL018C RPP0P05317 312 aaKnown RBP7.79□□□□□ -1.16
LDS1YAL018C IES2P40154 320 aa7.79□□□□□ -1.16
LDS1YAL018C CTF4Q01454 927 aa7.79□□□□□ -1.16
LDS1YAL018C HAP5Q02516 242 aa7.79□□□□□ -1.16
LDS1YAL018C YLR326WQ06170 240 aaKnown RBP7.79□□□□□ -1.16
LDS1YAL018C MEC3Q02574 474 aa7.78□□□□□ -1.16
LDS1YAL018C SPT23P35210 1082 aa7.77□□□□□ -1.17
LDS1YAL018C UBP14P38237 781 aaKnown RBP7.77□□□□□ -1.17
LDS1YAL018C RTR1P40084 226 aaPredicted RBP7.77□□□□□ -1.17
LDS1YAL018C AKL1P38080 1108 aaKnown RBP7.76□□□□□ -1.17
LDS1YAL018C DSD1P53095 428 aa7.76□□□□□ -1.17
LDS1YAL018C ROM2P51862 1356 aaKnown RBP7.75□□□□□ -1.17
LDS1YAL018C VHR2P40041 505 aa7.75□□□□□ -1.17
LDS1YAL018C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
LDS1YAL018C BNI4P53858 892 aa7.75□□□□□ -1.17
LDS1YAL018C SIR4P11978 1358 aa7.74□□□□□ -1.17
LDS1YAL018C YKL133CP36066 463 aa7.74□□□□□ -1.17
LDS1YAL018C RRP46P53256 223 aaPredicted RBP7.74□□□□□ -1.17
LDS1YAL018C PRD1P25375 712 aa7.73□□□□□ -1.17
LDS1YAL018C VPS27P40343 622 aaKnown RBP7.73□□□□□ -1.17
LDS1YAL018C NMA111P53920 997 aa7.73□□□□□ -1.17
LDS1YAL018C DPL1Q05567 589 aa7.73□□□□□ -1.17
LDS1YAL018C YDL144CQ07589 356 aa7.73□□□□□ -1.17
LDS1YAL018C MLP1Q02455 1875 aaKnown RBP7.72□□□□□ -1.17
LDS1YAL018C HSP104P31539 908 aaKnown RBP7.72□□□□□ -1.17
LDS1YAL018C AOS1Q06624 347 aa7.72□□□□□ -1.17
LDS1YAL018C CDC45Q08032 650 aa7.72□□□□□ -1.17
LDS1YAL018C PCS60P38137 543 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
LDS1YAL018C YFR016CP43597 1233 aaKnown RBP7.71□□□□□ -1.18
LDS1YAL018C YRB30P53107 440 aaPredicted RBP7.71□□□□□ -1.18
LDS1YAL018C YMR074CQ04773 145 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms