RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	ASA1	Q06822	443 aa		5.01	□□□□□ -1.61
NUP1	YOR098C	SIA1	Q12212	622 aa		5.01	□□□□□ -1.61
NUP1	YOR098C	YDR215C	Q12240	137 aa		5.01	□□□□□ -1.61
NUP1	YOR098C	BRR1	Q99177	341 aa	Predicted RBP	5.01	□□□□□ -1.61
NUP1	YOR098C	CLN3	P13365	580 aa		5	□□□□□ -1.61
NUP1	YOR098C	CBF1	P17106	351 aa		5	□□□□□ -1.61
NUP1	YOR098C	BMH1	P29311	267 aa	Known RBP	5	□□□□□ -1.61
NUP1	YOR098C	MYO3	P36006	1272 aa		5	□□□□□ -1.61
NUP1	YOR098C	PCL6	P40038	420 aa		5	□□□□□ -1.61
NUP1	YOR098C	YGR067C	P53243	804 aa		5	□□□□□ -1.61
NUP1	YOR098C	YAP7	Q08182	245 aa		5	□□□□□ -1.61
NUP1	YOR098C	THP2	O13539	261 aa	Known RBP	5	□□□□□ -1.61
NUP1	YOR098C	GAL4	P04386	881 aa		5	□□□□□ -1.61
NUP1	YOR098C	TCP1	P12612	559 aa	Known RBP	5	□□□□□ -1.61
NUP1	YOR098C	SMX2	P40204	77 aa	Known RBP	5	□□□□□ -1.61
NUP1	YOR098C	ERG10	P41338	398 aa	Known RBP	5	□□□□□ -1.61
NUP1	YOR098C	TDA10	P42938	290 aa		5	□□□□□ -1.61
NUP1	YOR098C	MTQ1	P53944	314 aa		5	□□□□□ -1.61
NUP1	YOR098C	DCR2	Q05924	578 aa		5	□□□□□ -1.61
NUP1	YOR098C	SPO77	Q06134	477 aa		5	□□□□□ -1.61
NUP1	YOR098C	TAF10	Q12030	206 aa		5	□□□□□ -1.61
NUP1	YOR098C	HIS4	P00815	799 aa	Known RBP	4.99	□□□□□ -1.61
NUP1	YOR098C	YAL037W	P39728	267 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	YGR210C	P42942	411 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	YFL015C	P43578	164 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	NAS6	P50086	228 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	SMM1	P53720	384 aa	Known RBP	4.99	□□□□□ -1.61
NUP1	YOR098C	MRPL50	P53724	139 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	YDR222W	Q04925	415 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	CDC123	Q05791	360 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	BRX1	Q08235	291 aa	Known RBP	4.99	□□□□□ -1.61
NUP1	YOR098C	CYC7	P00045	113 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	PMA2	P19657	947 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	ILV6	P25605	309 aa	Known RBP	4.99	□□□□□ -1.61
NUP1	YOR098C	ATO2	P32907	282 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	SKN1	P33336	771 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	MRPS5	P33759	307 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	MIC12	P38341	106 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	OSH3	P38713	996 aa	Known RBP	4.99	□□□□□ -1.61
NUP1	YOR098C	TAF6	P53040	516 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	RRP17	Q04031	235 aa	Predicted RBP	4.99	□□□□□ -1.61
NUP1	YOR098C	NAT4	Q04751	285 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	YMR226C	Q05016	267 aa	Known RBP	4.99	□□□□□ -1.61
NUP1	YOR098C	THI3	Q07471	609 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	LDS2	Q08218	356 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	UTR1	P21373	530 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	RPC19	P28000	142 aa	Known RBP	4.99	□□□□□ -1.61
NUP1	YOR098C	ATP7	P30902	174 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	RIM13	Q03792	727 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	ADH6	Q04894	360 aa	Known RBP	4.99	□□□□□ -1.61
NUP1	YOR098C	YLR049C	Q12110	428 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	NCA2	Q12374	616 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	RRI1	Q12468	440 aa		4.99	□□□□□ -1.61
NUP1	YOR098C	RPL35A	P0CX84	120 aa	Known RBP	4.98	□□□□□ -1.61
NUP1	YOR098C	RPL35B	P0CX85	120 aa	Known RBP	4.98	□□□□□ -1.61
NUP1	YOR098C	PUT3	P25502	979 aa	Predicted RBP	4.98	□□□□□ -1.61
NUP1	YOR098C	TMT1	P32643	299 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	SLI1	P53304	468 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	SUC2	P00724	532 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	MAS2	P11914	482 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	DAL82	P21705	255 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	POP5	P28005	173 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	APE2	P32454	952 aa	Known RBP	4.98	□□□□□ -1.61
NUP1	YOR098C	ROT2	P38138	954 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	ERG28	P40030	148 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	YJR154W	P47181	346 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	SSN8	P47821	323 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	YNL040W	P53960	456 aa	Predicted RBP	4.98	□□□□□ -1.61
NUP1	YOR098C	SAM4	Q08985	325 aa	Known RBP	4.98	□□□□□ -1.61
NUP1	YOR098C	YLL056C	Q12177	298 aa		4.98	□□□□□ -1.61
NUP1	YOR098C	RPL27A	P0C2H6	136 aa	Known RBP	4.97	□□□□□ -1.61
NUP1	YOR098C	RPL27B	P0C2H7	136 aa	Known RBP	4.97	□□□□□ -1.61
NUP1	YOR098C	BAR1	P12630	587 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	STE18	P18852	110 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	VMA6	P32366	345 aa	Known RBP	4.97	□□□□□ -1.61
NUP1	YOR098C	LST4	P34239	828 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	SRL3	P36167	246 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	YIL060W	P40519	144 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	AIM24	P47127	394 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	RBL2	P48606	106 aa	Known RBP	4.97	□□□□□ -1.61
NUP1	YOR098C	PKP2	P53170	491 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	GPI15	P53961	229 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	RVB1	Q03940	463 aa	Known RBP	4.97	□□□□□ -1.61
NUP1	YOR098C	CDA2	Q06703	312 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	ATG34	Q12292	412 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	CTR86	P25355	563 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	ERG9	P29704	444 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	UBC6	P33296	250 aa	Predicted RBP	4.97	□□□□□ -1.61
NUP1	YOR098C	CWC23	P52868	283 aa	Predicted RBP	4.97	□□□□□ -1.61
NUP1	YOR098C	DAP1	Q12091	152 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	RKM5	Q12367	367 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	YAK1	P14680	807 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	SPS19	P32573	292 aa	Known RBP	4.97	□□□□□ -1.61
NUP1	YOR098C	PCI8	P40512	444 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	YIR016W	P40572	265 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	ASI1	P54074	624 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	YMR034C	Q05131	434 aa	Predicted RBP	4.97	□□□□□ -1.61
NUP1	YOR098C	ECI1	Q05871	280 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	YPQ1	Q12010	308 aa		4.97	□□□□□ -1.61
NUP1	YOR098C	PTP1	P25044	335 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 75 ms