RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	YNL181W	P53878	407 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	KTR6	P54070	446 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	HXT11	P54862	567 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	ODC1	Q03028	310 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	SLF1	Q12034	447 aa	Known RBP	4.73	□□□□□ -1.65
LCB2	YDR062W	BSC1	Q12140	328 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	PSK1	P31374	1356 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	TEF1	P02994	458 aa	Known RBP	4.73	□□□□□ -1.65
LCB2	YDR062W	PRR1	P28708	518 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	SRB4	P32569	687 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	ARC19	P33204	171 aa	Known RBP	4.73	□□□□□ -1.65
LCB2	YDR062W	IST2	P38250	946 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	ATG7	P38862	630 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	VPS52	P39904	641 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	GAT1	P43574	510 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	AVT1	P47082	602 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	AIM24	P47127	394 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	YPT11	P48559	417 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	YGL082W	P53155	381 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	LST7	P53237	242 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	SPR6	Q01684	191 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	HER2	Q03557	464 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	VPS74	Q06385	345 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
LCB2	YDR062W	YDL009C	Q12210	107 aa		4.73	□□□□□ -1.65
LCB2	YDR062W	YSR3	P23501	404 aa		4.72	□□□□□ -1.65
LCB2	YDR062W	TIP1	P27654	210 aa	Predicted RBP	4.72	□□□□□ -1.65
LCB2	YDR062W	TMT1	P32643	299 aa		4.72	□□□□□ -1.65
LCB2	YDR062W	LOS1	P33418	1100 aa	Predicted RBP	4.72	□□□□□ -1.65
LCB2	YDR062W	PXR1	P53335	271 aa	Predicted RBP	4.72	□□□□□ -1.65
LCB2	YDR062W	YLR283W	Q05867	314 aa		4.72	□□□□□ -1.65
LCB2	YDR062W	CMS1	Q07897	291 aa	Known RBP	4.72	□□□□□ -1.65
LCB2	YDR062W	RAX1	Q08760	435 aa		4.72	□□□□□ -1.65
LCB2	YDR062W	YOR029W	Q12243	111 aa		4.72	□□□□□ -1.65
LCB2	YDR062W	TPT1	Q12272	230 aa	Known RBP	4.72	□□□□□ -1.65
LCB2	YDR062W	YOS9	Q99220	542 aa		4.72	□□□□□ -1.65
LCB2	YDR062W	RSF2	P46974	1380 aa		4.71	□□□□□ -1.65
LCB2	YDR062W	ADH2	P00331	348 aa	Known RBP	4.71	□□□□□ -1.66
LCB2	YDR062W	TDH2	P00358	332 aa	Known RBP	4.71	□□□□□ -1.66
LCB2	YDR062W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
LCB2	YDR062W	RRT12	P25381	491 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	POP5	P28005	173 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	ACB1	P31787	87 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	OAR1	P35731	278 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	MCR1	P36060	302 aa	Known RBP	4.71	□□□□□ -1.66
LCB2	YDR062W	FHL1	P39521	936 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	GWT1	P47026	490 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	AZR1	P50080	613 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	MKC7	P53379	596 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	BET4	Q00618	327 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	ECI1	Q05871	280 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	BER1	Q06688	274 aa	Known RBP	4.71	□□□□□ -1.66
LCB2	YDR062W	PAM18	Q07914	168 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	TIM18	Q08749	192 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	POM152	P39685	1337 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	YRF1-3	P0CX14	1859 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	YRF1-7	P0CX15	1859 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	YRF1-6	P53819	1859 aa		4.71	□□□□□ -1.66
LCB2	YDR062W	FUS3	P16892	353 aa	Known RBP	4.7	□□□□□ -1.66
LCB2	YDR062W	MEI5	P32489	222 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	YEF1	P32622	495 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	RBG1	P39729	369 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	SEH1	P53011	349 aa	Known RBP	4.7	□□□□□ -1.66
LCB2	YDR062W	OKP1	P53298	406 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	TDA7	P53882	636 aa	Predicted RBP	4.7	□□□□□ -1.66
LCB2	YDR062W	YMR209C	Q03648	457 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	DIB1	Q06819	143 aa	Predicted RBP	4.7	□□□□□ -1.66
LCB2	YDR062W	PBP4	Q07362	185 aa	Known RBP	4.7	□□□□□ -1.66
LCB2	YDR062W	YAP7	Q08182	245 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	YPQ1	Q12010	308 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	DAL81	P21657	970 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	YCP4	P25349	247 aa	Known RBP	4.7	□□□□□ -1.66
LCB2	YDR062W	ZIP1	P31111	875 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	AIM29	P36154	155 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	DHH1	P39517	506 aa	Known RBP	4.7	□□□□□ -1.66
LCB2	YDR062W	AGP3	P43548	558 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	ABM1	P47146	123 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	ARK1	P53974	638 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	IDP3	P53982	420 aa	Known RBP	4.7	□□□□□ -1.66
LCB2	YDR062W	MYO5	Q04439	1219 aa	Known RBP	4.7	□□□□□ -1.66
LCB2	YDR062W	RTN1	Q04947	295 aa	Known RBP	4.7	□□□□□ -1.66
LCB2	YDR062W	MUM3	Q08750	479 aa		4.7	□□□□□ -1.66
LCB2	YDR062W	SSC1	P0CS90	654 aa	Known RBP	4.69	□□□□□ -1.66
LCB2	YDR062W	MATALPHA1	P0CY06	175 aa		4.69	□□□□□ -1.66
LCB2	YDR062W	HMLALPHA1	P0CY07	175 aa		4.69	□□□□□ -1.66
LCB2	YDR062W	RBK1	P25332	333 aa		4.69	□□□□□ -1.66
LCB2	YDR062W	PUT3	P25502	979 aa	Predicted RBP	4.69	□□□□□ -1.66
LCB2	YDR062W	BIG1	P38813	335 aa		4.69	□□□□□ -1.66
LCB2	YDR062W	YPL080C	Q02826	108 aa		4.69	□□□□□ -1.66
LCB2	YDR062W	ENT5	Q03769	411 aa	Known RBP	4.69	□□□□□ -1.66
LCB2	YDR062W	CSM3	Q04659	317 aa		4.69	□□□□□ -1.66
LCB2	YDR062W	ADH6	Q04894	360 aa	Known RBP	4.69	□□□□□ -1.66
LCB2	YDR062W	IRC10	Q08118	586 aa		4.69	□□□□□ -1.66
LCB2	YDR062W	SET6	Q12529	373 aa		4.69	□□□□□ -1.66
LCB2	YDR062W	PGK1	P00560	416 aa	Known RBP	4.68	□□□□□ -1.66
LCB2	YDR062W	DCC1	P25559	380 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	ERG9	P29704	444 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	SWD2	P36104	329 aa	Predicted RBP	4.68	□□□□□ -1.66
LCB2	YDR062W	PRS4	P38063	326 aa	Predicted RBP	4.68	□□□□□ -1.66
LCB2	YDR062W	GPX2	P38143	162 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms