RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W MMT1Q03218 510 aa4.28□□□□□ -1.72
NMD3YHR170W SWF1Q04629 336 aa4.28□□□□□ -1.72
NMD3YHR170W SWA2Q06677 668 aa4.28□□□□□ -1.72
NMD3YHR170W YLL007CQ07799 665 aa4.28□□□□□ -1.72
NMD3YHR170W SRO7Q12038 1033 aa4.28□□□□□ -1.72
NMD3YHR170W NMD4Q12129 218 aa4.28□□□□□ -1.72
NMD3YHR170W YOR342CQ12182 319 aa4.28□□□□□ -1.72
NMD3YHR170W MSB2P32334 1306 aa4.28□□□□□ -1.72
NMD3YHR170W PEX3P28795 441 aa4.27□□□□□ -1.73
NMD3YHR170W PET127P32606 800 aa4.27□□□□□ -1.73
NMD3YHR170W CAT2P32796 670 aaKnown RBP4.27□□□□□ -1.73
NMD3YHR170W MRPL37P36532 105 aa4.27□□□□□ -1.73
NMD3YHR170W PSD1P39006 500 aa4.27□□□□□ -1.73
NMD3YHR170W YEL020CP39994 560 aa4.27□□□□□ -1.73
NMD3YHR170W CSL4P53859 292 aaPredicted RBP4.27□□□□□ -1.73
NMD3YHR170W RAD30Q04049 632 aa4.27□□□□□ -1.73
NMD3YHR170W PEX12Q04370 399 aa4.27□□□□□ -1.73
NMD3YHR170W ROY1Q04847 553 aa4.27□□□□□ -1.73
NMD3YHR170W TRI1Q05024 226 aa4.27□□□□□ -1.73
NMD3YHR170W ARR1Q06596 294 aa4.27□□□□□ -1.73
NMD3YHR170W YPR022CQ12139 1133 aa4.27□□□□□ -1.73
NMD3YHR170W YPR064WQ12492 139 aa4.27□□□□□ -1.73
NMD3YHR170W Q0010Q9ZZX9 128 aa4.27□□□□□ -1.73
NMD3YHR170W YPR096CO13587 100 aa4.27□□□□□ -1.73
NMD3YHR170W COX3P00420 269 aa4.27□□□□□ -1.73
NMD3YHR170W RAD7P06779 565 aa4.27□□□□□ -1.73
NMD3YHR170W TY2A-LR1P0C2J4 438 aa4.27□□□□□ -1.73
NMD3YHR170W TY2A-FP0CX61 438 aa4.27□□□□□ -1.73
NMD3YHR170W TY2A-GR2P0CX62 438 aa4.27□□□□□ -1.73
NMD3YHR170W STE12P13574 688 aa4.27□□□□□ -1.73
NMD3YHR170W URA4P20051 364 aa4.27□□□□□ -1.73
NMD3YHR170W CMK2P22517 447 aa4.27□□□□□ -1.73
NMD3YHR170W SLM5P25345 492 aaKnown RBP4.27□□□□□ -1.73
NMD3YHR170W TY2A-CP25383 438 aa4.27□□□□□ -1.73
NMD3YHR170W PPQ1P32945 549 aa4.27□□□□□ -1.73
NMD3YHR170W HIS7P33734 552 aaKnown RBP4.27□□□□□ -1.73
NMD3YHR170W NTR2P36118 322 aaPredicted RBP4.27□□□□□ -1.73
NMD3YHR170W SRO77P38163 1010 aa4.27□□□□□ -1.73
NMD3YHR170W RCK1P38622 512 aa4.27□□□□□ -1.73
NMD3YHR170W STP2P38704 541 aa4.27□□□□□ -1.73
NMD3YHR170W YPS6P40583 537 aa4.27□□□□□ -1.73
NMD3YHR170W ELP2P42935 788 aa4.27□□□□□ -1.73
NMD3YHR170W BNA3P47039 444 aaKnown RBP4.27□□□□□ -1.73
NMD3YHR170W BIT61P47041 543 aa4.27□□□□□ -1.73
NMD3YHR170W DCP2P53550 970 aaKnown RBP4.27□□□□□ -1.73
NMD3YHR170W YNL095CP53932 642 aa4.27□□□□□ -1.73
NMD3YHR170W SWS2P53937 143 aa4.27□□□□□ -1.73
NMD3YHR170W EOS1P53938 366 aa4.27□□□□□ -1.73
NMD3YHR170W TY2A-DR2Q03483 438 aa4.27□□□□□ -1.73
NMD3YHR170W TRM82Q03774 444 aa4.27□□□□□ -1.73
NMD3YHR170W YML053CQ04978 212 aa4.27□□□□□ -1.73
NMD3YHR170W RSF1Q05043 376 aa4.27□□□□□ -1.73
NMD3YHR170W RRP45Q05636 305 aaKnown RBP4.27□□□□□ -1.73
NMD3YHR170W YLR456WQ06199 204 aa4.27□□□□□ -1.73
NMD3YHR170W VPS74Q06385 345 aa4.27□□□□□ -1.73
NMD3YHR170W DTD1Q07648 150 aaKnown RBP4.27□□□□□ -1.73
NMD3YHR170W RRP40Q08285 240 aaKnown RBP4.27□□□□□ -1.73
NMD3YHR170W RCN2Q12044 265 aa4.27□□□□□ -1.73
NMD3YHR170W TY2A-BQ12260 438 aa4.27□□□□□ -1.73
NMD3YHR170W TY2A-OR2Q12293 438 aa4.27□□□□□ -1.73
NMD3YHR170W WTM1Q12363 437 aaKnown RBP4.27□□□□□ -1.73
NMD3YHR170W TY2A-DR1Q12392 438 aa4.27□□□□□ -1.73
NMD3YHR170W TY2A-OR1Q12439 438 aa4.27□□□□□ -1.73
NMD3YHR170W PFK27Q12471 397 aaPredicted RBP4.27□□□□□ -1.73
NMD3YHR170W TY2A-DR3Q99303 438 aa4.27□□□□□ -1.73
NMD3YHR170W CSF1Q12150 2958 aa4.26□□□□□ -1.73
NMD3YHR170W ACC1Q00955 2233 aaKnown RBP4.26□□□□□ -1.73
NMD3YHR170W IRA2P19158 3079 aa4.26□□□□□ -1.73
NMD3YHR170W CBP2P03874 630 aaPredicted RBP4.26□□□□□ -1.73
NMD3YHR170W URA3P03962 267 aa4.26□□□□□ -1.73
NMD3YHR170W SIR3P06701 978 aa4.26□□□□□ -1.73
NMD3YHR170W CBS1P14066 229 aa4.26□□□□□ -1.73
NMD3YHR170W UBC8P28263 218 aa4.26□□□□□ -1.73
NMD3YHR170W MRP20P32387 263 aa4.26□□□□□ -1.73
NMD3YHR170W SFC1P33303 322 aa4.26□□□□□ -1.73
NMD3YHR170W FMP46P36141 133 aaKnown RBP4.26□□□□□ -1.73
NMD3YHR170W PIM1P36775 1133 aa4.26□□□□□ -1.73
NMD3YHR170W ARA1P38115 344 aa4.26□□□□□ -1.73
NMD3YHR170W YBR241CP38142 488 aa4.26□□□□□ -1.73
NMD3YHR170W LYS1P38998 373 aaRIP-Chip data4.26□□□□□ -1.73not detected
NMD3YHR170W GVP36P40531 326 aaKnown RBP4.26□□□□□ -1.73
NMD3YHR170W BUD8P41698 603 aa4.26□□□□□ -1.73
NMD3YHR170W YJL043WP47053 257 aa4.26□□□□□ -1.73
NMD3YHR170W YML096WQ04489 525 aa4.26□□□□□ -1.73
NMD3YHR170W PDR8Q06149 701 aa4.26□□□□□ -1.73
NMD3YHR170W MFG1Q07684 458 aa4.26□□□□□ -1.73
NMD3YHR170W YLR036CQ07986 203 aa4.26□□□□□ -1.73
NMD3YHR170W REX4Q08237 289 aa4.26□□□□□ -1.73
NMD3YHR170W TAF3Q12297 353 aa4.26□□□□□ -1.73
NMD3YHR170W BRR1Q99177 341 aaPredicted RBP4.26□□□□□ -1.73
NMD3YHR170W CYR1P08678 2026 aaKnown RBP4.25□□□□□ -1.73
NMD3YHR170W RHO1P06780 209 aaKnown RBP4.25□□□□□ -1.73
NMD3YHR170W ATR1P13090 542 aa4.25□□□□□ -1.73
NMD3YHR170W ADE1P27616 306 aa4.25□□□□□ -1.73
NMD3YHR170W PUP2P32379 260 aa4.25□□□□□ -1.73
NMD3YHR170W NUP2P32499 720 aa4.25□□□□□ -1.73
NMD3YHR170W SSO1P32867 290 aa4.25□□□□□ -1.73
NMD3YHR170W LHP1P33399 275 aaKnown RBP4.25□□□□□ -1.73
NMD3YHR170W SPC34P36131 295 aa4.25□□□□□ -1.73
NMD3YHR170W BNA4P38169 460 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms