RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	LDB17	Q12342	491 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	HRT3	Q12347	344 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	RTN2	Q12443	393 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	RGS2	Q99188	309 aa		3.39	□□□□□ -1.87
TPM1	YNL079C	SEC14	P24280	304 aa	Known RBP	3.38	□□□□□ -1.87
TPM1	YNL079C	ADK2	P26364	225 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	NDI1	P32340	513 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	PHA2	P32452	334 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	NPL6	P32832	435 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	SIF2	P38262	535 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	FZO1	P38297	855 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	YDR089W	P38966	869 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	EDC3	P39998	551 aa	Known RBP	3.38	□□□□□ -1.87
TPM1	YNL079C	CHS6	P40955	746 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	RTT101	P47050	842 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	RNY1	Q02933	434 aa	Known RBP	3.38	□□□□□ -1.87
TPM1	YNL079C	INP2	Q03824	705 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	TVP15	Q03860	143 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	RBS1	Q05672	457 aa	Known RBP	3.38	□□□□□ -1.87
TPM1	YNL079C	PHO92	Q06390	306 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	SWC7	Q06707	132 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	SLD7	Q08457	257 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	SCM3	Q12334	223 aa		3.38	□□□□□ -1.87
TPM1	YNL079C	BRR1	Q99177	341 aa	Predicted RBP	3.38	□□□□□ -1.87
TPM1	YNL079C	COX5A	P00424	153 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
TPM1	YNL079C	GLK1	P17709	500 aa	Known RBP	3.37	□□□□□ -1.87
TPM1	YNL079C	SNT1	P25357	1226 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	KAP104	P38217	918 aa	Known RBP	3.37	□□□□□ -1.87
TPM1	YNL079C	URA8	P38627	578 aa	Predicted RBP	3.37	□□□□□ -1.87
TPM1	YNL079C	YHI9	P38765	294 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	STN1	P38960	494 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	FRT2	P39734	528 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	SEC28	P40509	296 aa	Known RBP	3.37	□□□□□ -1.87
TPM1	YNL079C	RPS0B	P46654	252 aa	Known RBP	3.37	□□□□□ -1.87
TPM1	YNL079C	DLD2	P46681	530 aa	Known RBP	3.37	□□□□□ -1.87
TPM1	YNL079C	MRM2	P53123	320 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	USE1	P53146	245 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	PGC1	Q08959	321 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	YDL009C	Q12210	107 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	YMR030W-A	Q3E760	96 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	YOL159C-A	Q3E769	90 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	AFI1	Q99222	893 aa		3.37	□□□□□ -1.87
TPM1	YNL079C	CAR1	P00812	333 aa	Known RBP	3.36	□□□□□ -1.87
TPM1	YNL079C	MES1	P00958	751 aa	Known RBP	3.36	□□□□□ -1.87
TPM1	YNL079C	MAS1	P10507	462 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	BUD14	P27637	709 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	SPR1	P32603	445 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	MRP21	P38175	177 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	ECM13	P38195	257 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	ATG12	P38316	186 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	YHR182W	P38870	785 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	SEO1	P39709	593 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	TRF5	P48561	642 aa	Known RBP	3.36	□□□□□ -1.87
TPM1	YNL079C	ASN2	P49090	572 aa	Known RBP	3.36	□□□□□ -1.87
TPM1	YNL079C	MIG2	P53035	382 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	YGL260W	P53056	76 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	YGL108C	P53139	140 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	TIM13	P53299	105 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	GPI1	P53306	609 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	CRZ1	P53968	678 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	CDC14	Q00684	551 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	PIR3	Q03180	325 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	HER2	Q03557	464 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	MRPL51	Q06090	140 aa	Predicted RBP	3.36	□□□□□ -1.87
TPM1	YNL079C	LDB18	Q07887	179 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	APC9	Q12107	265 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	OCA6	Q12454	224 aa		3.36	□□□□□ -1.87
TPM1	YNL079C	RRP36	Q12481	300 aa	Predicted RBP	3.36	□□□□□ -1.87
TPM1	YNL079C	RPL15A	P05748	204 aa	Known RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	RHO2	P06781	192 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	CLN1	P20437	546 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	REC107	P21651	314 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	AAT2	P23542	418 aa	Known RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	SPS22	P25380	463 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	RAD14	P28519	371 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	ATS1	P31386	333 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	SIN4	P32259	974 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	ATP11	P32453	318 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	NDC1	P32500	655 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	PTR2	P32901	601 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	RFS1	P38234	210 aa	Known RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	DHH1	P39517	506 aa	Known RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	YHB1	P39676	399 aa	Known RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	BTT1	P40314	149 aa	Predicted RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	SYG1	P40528	902 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	VMA13	P41807	478 aa	Known RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	UFE1	P41834	346 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	YFL040W	P43562	540 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	PRP24	P49960	444 aa	Known RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	OCA1	P50946	238 aa	Predicted RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	TRM112	P53738	135 aa	Predicted RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	OSH6	Q02201	448 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	IRC15	Q02733	499 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	PET117	Q02771	107 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	YMR155W	Q03795	547 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	CSN9	Q03981	162 aa		3.35	□□□□□ -1.87
TPM1	YNL079C	HPT1	Q04178	221 aa	Known RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	SNX3	Q08826	162 aa	Known RBP	3.35	□□□□□ -1.87
TPM1	YNL079C	YPR202W	Q08993	238 aa		3.35	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms