RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W YNL146WP53906 100 aa3.14□□□□□ -1.91
SWD2YKL018W ARP5P53946 755 aa3.14□□□□□ -1.91
SWD2YKL018W YNL050CP53952 270 aa3.14□□□□□ -1.91
SWD2YKL018W ABZ2Q03266 374 aa3.14□□□□□ -1.91
SWD2YKL018W LDS2Q08218 356 aa3.14□□□□□ -1.91
SWD2YKL018W HNT3Q08702 217 aa3.14□□□□□ -1.91
SWD2YKL018W YCL021W-AQ96VH3 125 aa3.14□□□□□ -1.91
SWD2YKL018W RAD61Q99359 647 aa3.14□□□□□ -1.91
SWD2YKL018W DEG1P31115 442 aaKnown RBP3.13□□□□□ -1.91
SWD2YKL018W DPH5P32469 300 aaPredicted RBP3.13□□□□□ -1.91
SWD2YKL018W SKT5P34226 696 aa3.13□□□□□ -1.91
SWD2YKL018W PEX32P38292 413 aa3.13□□□□□ -1.91
SWD2YKL018W SSO2P39926 295 aa3.13□□□□□ -1.91
SWD2YKL018W TOS3P43637 560 aa3.13□□□□□ -1.91
SWD2YKL018W SFH5P47008 294 aa3.13□□□□□ -1.91
SWD2YKL018W YHC3P47040 408 aa3.13□□□□□ -1.91
SWD2YKL018W YGL114WP53134 725 aa3.13□□□□□ -1.91
SWD2YKL018W SPR6Q01684 191 aa3.13□□□□□ -1.91
SWD2YKL018W ARR1Q06596 294 aa3.13□□□□□ -1.91
SWD2YKL018W SNX3Q08826 162 aaKnown RBP3.13□□□□□ -1.91
SWD2YKL018W TPT1Q12272 230 aaKnown RBP3.13□□□□□ -1.91
SWD2YKL018W PFK27Q12471 397 aaPredicted RBP3.13□□□□□ -1.91
SWD2YKL018W SSK22P25390 1331 aaPredicted RBP3.13□□□□□ -1.91
SWD2YKL018W IKI3Q06706 1349 aaKnown RBP3.13□□□□□ -1.91
SWD2YKL018W CBP2P03874 630 aaPredicted RBP3.12□□□□□ -1.91
SWD2YKL018W CDC37P06101 506 aaKnown RBP3.12□□□□□ -1.91
SWD2YKL018W RNR2P09938 399 aaKnown RBP3.12□□□□□ -1.91
SWD2YKL018W GCD2P12754 651 aaPredicted RBP3.12□□□□□ -1.91
SWD2YKL018W CLN3P13365 580 aa3.12□□□□□ -1.91
SWD2YKL018W DBP3P20447 523 aaKnown RBP3.12□□□□□ -1.91
SWD2YKL018W HXT2P23585 541 aa3.12□□□□□ -1.91
SWD2YKL018W DBR1P24309 405 aaKnown RBP3.12□□□□□ -1.91
SWD2YKL018W SPS22P25380 463 aa3.12□□□□□ -1.91
SWD2YKL018W DEP1P31385 405 aa3.12□□□□□ -1.91
SWD2YKL018W ACP1P32463 125 aa3.12□□□□□ -1.91
SWD2YKL018W BUD2P33314 1104 aa3.12□□□□□ -1.91
SWD2YKL018W YUH1P35127 236 aa3.12□□□□□ -1.91
SWD2YKL018W NAT2P37293 288 aa3.12□□□□□ -1.91
SWD2YKL018W SLX1P38324 304 aa3.12□□□□□ -1.91
SWD2YKL018W LIN1P38852 340 aaPredicted RBP3.12□□□□□ -1.91
SWD2YKL018W INA22P40576 216 aa3.12□□□□□ -1.91
SWD2YKL018W OST1P41543 476 aaKnown RBP3.12□□□□□ -1.91
SWD2YKL018W YFL067WP43537 175 aa3.12□□□□□ -1.91
SWD2YKL018W YFR018CP43599 363 aa3.12□□□□□ -1.91
SWD2YKL018W RPN14P53196 417 aa3.12□□□□□ -1.91
SWD2YKL018W MSO1P53604 210 aaKnown RBP3.12□□□□□ -1.91
SWD2YKL018W RTC4P53850 401 aa3.12□□□□□ -1.91
SWD2YKL018W IBD2P53892 351 aa3.12□□□□□ -1.91
SWD2YKL018W YMR181CQ03231 154 aa3.12□□□□□ -1.91
SWD2YKL018W BCH1Q05029 724 aa3.12□□□□□ -1.91
SWD2YKL018W PAL1Q05518 499 aaKnown RBP3.12□□□□□ -1.91
SWD2YKL018W YLR297WQ05899 129 aa3.12□□□□□ -1.91
SWD2YKL018W ARR2Q06597 130 aa3.12□□□□□ -1.91
SWD2YKL018W RRT8Q08219 342 aa3.12□□□□□ -1.91
SWD2YKL018W RRP12Q12754 1228 aaKnown RBP3.12□□□□□ -1.91
SWD2YKL018W YIL002W-AQ3E7Z5 69 aa3.12□□□□□ -1.91
SWD2YKL018W THO2P53552 1597 aaKnown RBP3.12□□□□□ -1.91
SWD2YKL018W VPS63O13549 108 aa3.11□□□□□ -1.91
SWD2YKL018W KSS1P14681 368 aa3.11□□□□□ -1.91
SWD2YKL018W VPS3P23643 1011 aa3.11□□□□□ -1.91
SWD2YKL018W YCL068CP25593 260 aa3.11□□□□□ -1.91
SWD2YKL018W DOA4P32571 926 aa3.11□□□□□ -1.91
SWD2YKL018W ECM4P36156 370 aa3.11□□□□□ -1.91
SWD2YKL018W MRPL40P36534 297 aa3.11□□□□□ -1.91
SWD2YKL018W CHK1P38147 527 aa3.11□□□□□ -1.91
SWD2YKL018W NDT80P38830 627 aa3.11□□□□□ -1.91
SWD2YKL018W MTC6P38849 526 aa3.11□□□□□ -1.91
SWD2YKL018W ALP1P38971 573 aa3.11□□□□□ -1.91
SWD2YKL018W FAA2P39518 744 aa3.11□□□□□ -1.91
SWD2YKL018W SIM1P40472 476 aa3.11□□□□□ -1.91
SWD2YKL018W LYS12P40495 371 aaKnown RBP3.11□□□□□ -1.91
SWD2YKL018W TOS2P50078 622 aa3.11□□□□□ -1.91
SWD2YKL018W YGR117CP53270 476 aa3.11□□□□□ -1.91
SWD2YKL018W RET3P53600 189 aa3.11□□□□□ -1.91
SWD2YKL018W GOR1P53839 350 aa3.11□□□□□ -1.91
SWD2YKL018W CCE1Q03702 353 aa3.11□□□□□ -1.91
SWD2YKL018W VPS20Q04272 221 aa3.11□□□□□ -1.91
SWD2YKL018W AIM33Q04516 312 aa3.11□□□□□ -1.91
SWD2YKL018W YPR078CQ06813 372 aa3.11□□□□□ -1.91
SWD2YKL018W TSR1Q07381 788 aaKnown RBP3.11□□□□□ -1.91
SWD2YKL018W YOP1Q12402 180 aa3.11□□□□□ -1.91
SWD2YKL018W SPO24Q3E752 67 aa3.11□□□□□ -1.91
SWD2YKL018W YBL111CQ3E7Y5 667 aa3.11□□□□□ -1.91
SWD2YKL018W FSH3Q99369 266 aa3.11□□□□□ -1.91
SWD2YKL018W POM152P39685 1337 aa3.11□□□□□ -1.91
SWD2YKL018W YLL053CP0CD98 152 aa3.1□□□□□ -1.91
SWD2YKL018W GAL3P13045 520 aa3.1□□□□□ -1.91
SWD2YKL018W CAP2P13517 287 aa3.1□□□□□ -1.91
SWD2YKL018W PET18P25362 215 aa3.1□□□□□ -1.91
SWD2YKL018W MUD1P32605 298 aaKnown RBP3.1□□□□□ -1.91
SWD2YKL018W PAD1P33751 242 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
SWD2YKL018W END3P39013 349 aa3.1□□□□□ -1.91
SWD2YKL018W YHB1P39676 399 aaKnown RBP3.1□□□□□ -1.91
SWD2YKL018W PRP39P39682 629 aaKnown RBP3.1□□□□□ -1.91
SWD2YKL018W LIA1P47120 325 aaKnown RBP3.1□□□□□ -1.91
SWD2YKL018W SMP3Q04174 516 aa3.1□□□□□ -1.91
SWD2YKL018W KAP95Q06142 861 aaKnown RBP3.1□□□□□ -1.91
SWD2YKL018W RAX1Q08760 435 aa3.1□□□□□ -1.91
SWD2YKL018W THP3Q12049 470 aaKnown RBP3.1□□□□□ -1.91
SWD2YKL018W TY3A-GQ12173 290 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms