RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W IMD4P50094 524 aaKnown RBP12.86□□□□□ -0.35
RPN10YHR200W SPT20P50875 604 aa12.86□□□□□ -0.35
RPN10YHR200W YGR266WP53326 701 aa12.86□□□□□ -0.35
RPN10YHR200W NAM8Q00539 523 aaKnown RBP12.86□□□□□ -0.35
RPN10YHR200W YPL068CQ02749 293 aa12.86□□□□□ -0.35
RPN10YHR200W GUP2Q08929 609 aa12.86□□□□□ -0.35
RPN10YHR200W TRM10Q12400 293 aa12.86□□□□□ -0.35
RPN10YHR200W HOM3P10869 527 aa12.85□□□□□ -0.35
RPN10YHR200W PRP19P32523 503 aaKnown RBP12.85□□□□□ -0.35
RPN10YHR200W YHR097CP38809 366 aaKnown RBP12.85□□□□□ -0.35
RPN10YHR200W RIX1P38883 763 aaPredicted RBP12.85□□□□□ -0.35
RPN10YHR200W SOK1P40317 901 aa12.85□□□□□ -0.35
RPN10YHR200W YJR141WP47172 347 aaPredicted RBP12.85□□□□□ -0.35
RPN10YHR200W BAT2P47176 376 aaKnown RBP12.85□□□□□ -0.35
RPN10YHR200W NQM1P53228 333 aaPredicted RBP12.85□□□□□ -0.35
RPN10YHR200W DBP6P53734 629 aaKnown RBP12.85□□□□□ -0.35
RPN10YHR200W ARP10Q04549 284 aa12.85□□□□□ -0.35
RPN10YHR200W NOP12Q08208 459 aaKnown RBP12.85□□□□□ -0.35
RPN10YHR200W YDL211CQ12121 372 aa12.85□□□□□ -0.35
RPN10YHR200W APC2Q12440 853 aa12.85□□□□□ -0.35
RPN10YHR200W MXR2P25566 168 aa12.84□□□□□ -0.35
RPN10YHR200W HBS1P32769 611 aaKnown RBP12.84□□□□□ -0.35
RPN10YHR200W ECM4P36156 370 aa12.84□□□□□ -0.35
RPN10YHR200W SBE22P38814 852 aa12.84□□□□□ -0.35
RPN10YHR200W IPT1P38954 527 aa12.84□□□□□ -0.35
RPN10YHR200W TAT2P38967 592 aa12.84□□□□□ -0.35
RPN10YHR200W UME6P39001 836 aa12.84□□□□□ -0.35
RPN10YHR200W YIL152WP40455 235 aa12.84□□□□□ -0.35
RPN10YHR200W YIL067CP40514 678 aa12.84□□□□□ -0.35
RPN10YHR200W SMK1P41808 388 aa12.84□□□□□ -0.35
RPN10YHR200W GCN20P43535 752 aaKnown RBP12.84□□□□□ -0.35
RPN10YHR200W IDS2P46958 469 aa12.84□□□□□ -0.35
RPN10YHR200W EXG2P52911 562 aa12.84□□□□□ -0.35
RPN10YHR200W MAL11P53048 616 aa12.84□□□□□ -0.35
RPN10YHR200W TPC1P53257 314 aa12.84□□□□□ -0.35
RPN10YHR200W MEP3P53390 489 aa12.84□□□□□ -0.35
RPN10YHR200W YKR011CQ02209 353 aa12.84□□□□□ -0.35
RPN10YHR200W PST2Q12335 198 aaKnown RBP12.84□□□□□ -0.35
RPN10YHR200W IDP1P21954 428 aaKnown RBP12.83□□□□□ -0.36
RPN10YHR200W AHP1P38013 176 aaKnown RBP12.83□□□□□ -0.36
RPN10YHR200W AST2P39945 430 aaKnown RBP12.83□□□□□ -0.36
RPN10YHR200W SPG5P42933 373 aa12.83□□□□□ -0.36
RPN10YHR200W RET2P43621 546 aa12.83□□□□□ -0.36
RPN10YHR200W SNF12P53628 566 aa12.83□□□□□ -0.36
RPN10YHR200W CTL1Q03220 320 aaKnown RBP12.83□□□□□ -0.36
RPN10YHR200W TFB3Q03290 321 aa12.83□□□□□ -0.36
RPN10YHR200W VID22Q05934 901 aa12.83□□□□□ -0.36
RPN10YHR200W MET17P06106 444 aa12.82□□□□□ -0.36
RPN10YHR200W SIR3P06701 978 aa12.82□□□□□ -0.36
RPN10YHR200W RPC40P07703 335 aaKnown RBP12.82□□□□□ -0.36
RPN10YHR200W YSF3P0C074 85 aaPredicted RBP12.82□□□□□ -0.36
RPN10YHR200W SAM35P14693 329 aa12.82□□□□□ -0.36
RPN10YHR200W URE2P23202 354 aaKnown RBP12.82□□□□□ -0.36
RPN10YHR200W YCK1P23291 538 aa12.82□□□□□ -0.36
RPN10YHR200W NAR1P23503 491 aaKnown RBP12.82□□□□□ -0.36
RPN10YHR200W PMT2P31382 759 aa12.82□□□□□ -0.36
RPN10YHR200W KRE29P40026 464 aa12.82□□□□□ -0.36
RPN10YHR200W AVT6P40074 448 aa12.82□□□□□ -0.36
RPN10YHR200W GID8P40208 455 aa12.82□□□□□ -0.36
RPN10YHR200W YMR210WQ03649 449 aa12.82□□□□□ -0.36
RPN10YHR200W YLR345WQ06137 509 aa12.82□□□□□ -0.36
RPN10YHR200W YLR446WQ06204 433 aa12.82□□□□□ -0.36
RPN10YHR200W NBA1Q08229 501 aaKnown RBP12.82□□□□□ -0.36
RPN10YHR200W TPO4Q12256 659 aa12.82□□□□□ -0.36
RPN10YHR200W HER1Q12276 1246 aa12.82□□□□□ -0.36
RPN10YHR200W PSF1Q12488 208 aa12.82□□□□□ -0.36
RPN10YHR200W VCX1Q99385 411 aa12.82□□□□□ -0.36
RPN10YHR200W POL2P21951 2222 aaKnown RBP12.82□□□□□ -0.36
RPN10YHR200W AI1P03875 834 aa12.81□□□□□ -0.36
RPN10YHR200W GLK1P17709 500 aaKnown RBP12.81□□□□□ -0.36
RPN10YHR200W ARN2P38724 620 aa12.81□□□□□ -0.36
RPN10YHR200W UTP25P40498 721 aaKnown RBP12.81□□□□□ -0.36
RPN10YHR200W MDE1P47095 244 aa12.81□□□□□ -0.36
RPN10YHR200W JHD2P47156 728 aaPredicted RBP12.81□□□□□ -0.36
RPN10YHR200W HMS2P47175 358 aa12.81□□□□□ -0.36
RPN10YHR200W SYF2P53277 215 aaPredicted RBP12.81□□□□□ -0.36
RPN10YHR200W ARV1Q06541 321 aa12.81□□□□□ -0.36
RPN10YHR200W SNF6P18888 332 aa12.8□□□□□ -0.36
RPN10YHR200W GPI12P23797 304 aa12.8□□□□□ -0.36
RPN10YHR200W FAA1P30624 700 aaKnown RBP12.8□□□□□ -0.36
RPN10YHR200W ECM34P38728 170 aa12.8□□□□□ -0.36
RPN10YHR200W PEX18P38855 283 aa12.8□□□□□ -0.36
RPN10YHR200W YGR067CP53243 804 aa12.8□□□□□ -0.36
RPN10YHR200W YLR460CP54007 376 aa12.8□□□□□ -0.36
RPN10YHR200W YDR179W-AQ03983 463 aa12.8□□□□□ -0.36
RPN10YHR200W RNH1Q04740 348 aa12.8□□□□□ -0.36
RPN10YHR200W NEJ1Q06148 342 aa12.8□□□□□ -0.36
RPN10YHR200W ACC1Q00955 2233 aaKnown RBP12.8□□□□□ -0.36
RPN10YHR200W RPL20AP0CX23 172 aaKnown RBP12.79□□□□□ -0.36
RPN10YHR200W RPL20BP0CX24 172 aaPredicted RBP12.79□□□□□ -0.36
RPN10YHR200W ORC2P32833 620 aa12.79□□□□□ -0.36
RPN10YHR200W ECM15P35195 104 aa12.79□□□□□ -0.36
RPN10YHR200W ALG3P38179 458 aa12.79□□□□□ -0.36
RPN10YHR200W RPS20P38701 121 aaKnown RBP12.79□□□□□ -0.36
RPN10YHR200W YEL068CP39977 110 aa12.79□□□□□ -0.36
RPN10YHR200W LEM3P42838 414 aa12.79□□□□□ -0.36
RPN10YHR200W IRC5P43610 853 aa12.79□□□□□ -0.36
RPN10YHR200W YJR098CP47139 656 aa12.79□□□□□ -0.36
RPN10YHR200W TOS2P50078 622 aa12.79□□□□□ -0.36
RPN10YHR200W COS1P53822 381 aa12.79□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms