RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	NSA1	P53136	463 aa	Predicted RBP	5.53	□□□□□ -1.52
CHL4	YDR254W	PKP2	P53170	491 aa		5.53	□□□□□ -1.52
CHL4	YDR254W	RCF2	P53721	224 aa		5.53	□□□□□ -1.52
CHL4	YDR254W	GOR1	P53839	350 aa		5.53	□□□□□ -1.52
CHL4	YDR254W	IST1	P53843	298 aa	Predicted RBP	5.53	□□□□□ -1.52
CHL4	YDR254W	FYV6	P53913	173 aa		5.53	□□□□□ -1.52
CHL4	YDR254W	BUR2	Q05949	395 aa		5.53	□□□□□ -1.52
CHL4	YDR254W	MRP1	P10662	321 aa	Known RBP	5.52	□□□□□ -1.53
CHL4	YDR254W	CLN3	P13365	580 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	HPR1	P17629	752 aa	Known RBP	5.52	□□□□□ -1.53
CHL4	YDR254W	RPO26	P20435	155 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	FEN2	P25621	512 aa	Known RBP	5.52	□□□□□ -1.53
CHL4	YDR254W	DSS4	P32601	143 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	SPT10	P35208	640 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	MRPL7	P36519	292 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	QDR3	P38227	689 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	BAP3	P41815	604 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	ZRG17	P53735	605 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	YNL140C	P53910	189 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	RPS15	Q01855	142 aa	Known RBP	5.52	□□□□□ -1.53
CHL4	YDR254W	PEX10	Q05568	337 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	COQ11	Q05892	277 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	MCM21	Q06675	368 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	ATG9	Q12142	997 aa		5.52	□□□□□ -1.53
CHL4	YDR254W	RAD50	P12753	1312 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	CNA1	P23287	553 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	NDC1	P32500	655 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	RPC34	P32910	317 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	HIS2	P38635	335 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	UBA4	P38820	440 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	YHR177W	P38867	453 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	CTF8	P38877	133 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	CYC2	P38909	366 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	PCI8	P40512	444 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	PAC11	P40960	533 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	PRM10	P42946	383 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	RPN11	P43588	306 aa	Known RBP	5.51	□□□□□ -1.53
CHL4	YDR254W	YGR079W	P53249	370 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	ALG11	P53954	548 aa	Known RBP	5.51	□□□□□ -1.53
CHL4	YDR254W	NDE2	Q07500	545 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	CYK3	Q07533	885 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	MRH1	Q12117	320 aa	Predicted RBP	5.51	□□□□□ -1.53
CHL4	YDR254W	TPT1	Q12272	230 aa	Known RBP	5.51	□□□□□ -1.53
CHL4	YDR254W	YBR255C-A	Q3E776	120 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	ECM3	Q99252	613 aa		5.51	□□□□□ -1.53
CHL4	YDR254W	AAC1	P04710	309 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	ELO2	P25358	347 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	RFA3	P26755	122 aa	Known RBP	5.5	□□□□□ -1.53
CHL4	YDR254W	NTR2	P36118	322 aa	Predicted RBP	5.5	□□□□□ -1.53
CHL4	YDR254W	ECM8	P38246	354 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	SEN34	P39707	275 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	MMF1	P40185	145 aa	Known RBP	5.5	□□□□□ -1.53
CHL4	YDR254W	BTT1	P40314	149 aa	Predicted RBP	5.5	□□□□□ -1.53
CHL4	YDR254W	COA1	P40452	197 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	SBH2	P52871	88 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	YGL108C	P53139	140 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	SPC98	P53540	846 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	UBX2	Q04228	584 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	FRE5	Q08908	694 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	YLR053C	Q12026	108 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	WTM1	Q12363	437 aa	Known RBP	5.5	□□□□□ -1.53
CHL4	YDR254W	EMP46	Q12396	444 aa		5.5	□□□□□ -1.53
CHL4	YDR254W	YCF1	P39109	1515 aa	Known RBP	5.5	□□□□□ -1.53
CHL4	YDR254W	YDR157W	A0A023PZE8	133 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	HIS5	P07172	385 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	RIP1	P08067	215 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	PCT1	P13259	424 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	PPZ1	P26570	692 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	LOS1	P33418	1100 aa	Predicted RBP	5.49	□□□□□ -1.53
CHL4	YDR254W	MCH2	P36032	473 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	GMH1	P36125	273 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	DER1	P38307	211 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	VHC1	P38329	1120 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	CCT4	P39078	528 aa	Known RBP	5.49	□□□□□ -1.53
CHL4	YDR254W	UIP3	P39547	235 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	VPS62	P53285	467 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	ARO80	Q04052	950 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	COQ9	Q05779	260 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	DXO1	Q06349	442 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	ARR3	Q06598	404 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	YET3	Q07451	203 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	SIA1	Q12212	622 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	AIM45	Q12480	344 aa	Known RBP	5.49	□□□□□ -1.53
CHL4	YDR254W	SNF8	Q12483	233 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	RGS2	Q99188	309 aa		5.49	□□□□□ -1.53
CHL4	YDR254W	TOP2	P06786	1428 aa	Known RBP	5.48	□□□□□ -1.53
CHL4	YDR254W	ADE4	P04046	510 aa	Known RBP	5.48	□□□□□ -1.53
CHL4	YDR254W	SIR3	P06701	978 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	RHO2	P06781	192 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	PUT1	P09368	476 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	PTP1	P25044	335 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	MSK1	P32048	576 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	TCA17	P32613	152 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	RAD24	P32641	659 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	VPS21	P36017	210 aa	Known RBP	5.48	□□□□□ -1.53
CHL4	YDR254W	YKL162C	P36052	402 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	ICS2	P38284	255 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	YHR112C	P38716	378 aa		5.48	□□□□□ -1.53
CHL4	YDR254W	PCF11	P39081	626 aa	Predicted RBP	5.48	□□□□□ -1.53
CHL4	YDR254W	ECM10	P39987	644 aa		5.48	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms