RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC1	YDL006W	HER2	Q03557	464 aa		4.27	□□□□□ -1.73
PTC1	YDL006W	AIM32	Q04689	311 aa		4.27	□□□□□ -1.73
PTC1	YDL006W	YMR317W	Q04893	1140 aa		4.27	□□□□□ -1.73
PTC1	YDL006W	YLL056C	Q12177	298 aa		4.27	□□□□□ -1.73
PTC1	YDL006W	RUD3	Q12234	484 aa	Known RBP	4.27	□□□□□ -1.73
PTC1	YDL006W	EFG1	Q3E705	233 aa	Known RBP	4.27	□□□□□ -1.73
PTC1	YDL006W	AFI1	Q99222	893 aa		4.27	□□□□□ -1.73
PTC1	YDL006W	HIS1	P00498	297 aa	Known RBP	4.26	□□□□□ -1.73
PTC1	YDL006W	RAD10	P06838	210 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	MET16	P18408	261 aa	Predicted RBP	4.26	□□□□□ -1.73
PTC1	YDL006W	MGT1	P26188	188 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	CRM1	P30822	1084 aa	Known RBP	4.26	□□□□□ -1.73
PTC1	YDL006W	VMA8	P32610	256 aa	Known RBP	4.26	□□□□□ -1.73
PTC1	YDL006W	RAD5	P32849	1169 aa	Predicted RBP	4.26	□□□□□ -1.73
PTC1	YDL006W	PXA2	P34230	853 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	RSM22	P36056	628 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	CCT2	P39076	527 aa	Known RBP	4.26	□□□□□ -1.73
PTC1	YDL006W	DHH1	P39517	506 aa	Known RBP	4.26	□□□□□ -1.73
PTC1	YDL006W	SHO1	P40073	367 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	ALG8	P40351	577 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	UFE1	P41834	346 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	CAK1	P43568	368 aa	Predicted RBP	4.26	□□□□□ -1.73
PTC1	YDL006W	RRT5	P43607	289 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	HSP31	Q04432	237 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	STE23	Q06010	1027 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	YLR345W	Q06137	509 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	AAD15	Q08361	143 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	SPE3	Q12074	293 aa	Known RBP	4.26	□□□□□ -1.73
PTC1	YDL006W	VAM3	Q12241	283 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	ISA2	Q12425	185 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	YKL068W-A	Q3E826	78 aa		4.26	□□□□□ -1.73
PTC1	YDL006W	CMD1	P06787	147 aa	Known RBP	4.25	□□□□□ -1.73
PTC1	YDL006W	PEX34	P25584	144 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	SIN4	P32259	974 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	LOS1	P33418	1100 aa	Predicted RBP	4.25	□□□□□ -1.73
PTC1	YDL006W	URA8	P38627	578 aa	Predicted RBP	4.25	□□□□□ -1.73
PTC1	YDL006W	AIM18	P38884	321 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	HAT2	P39984	401 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	YEL028W	P39989	153 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	SCC4	P40090	624 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	TCB2	P48231	1178 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	DSL1	P53847	754 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	GRX8	Q05926	109 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	UBR2	Q07963	1872 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	RKM1	Q08961	583 aa	Predicted RBP	4.25	□□□□□ -1.73
PTC1	YDL006W	MED2	Q12124	431 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	GPM3	Q12326	303 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	SET6	Q12529	373 aa		4.25	□□□□□ -1.73
PTC1	YDL006W	RPL20A	P0CX23	172 aa	Known RBP	4.24	□□□□□ -1.73
PTC1	YDL006W	RPL20B	P0CX24	172 aa	Predicted RBP	4.24	□□□□□ -1.73
PTC1	YDL006W	SEC63	P14906	663 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	CBF1	P17106	351 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	SRV2	P17555	526 aa	Known RBP	4.24	□□□□□ -1.73
PTC1	YDL006W	CPR2	P23285	205 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	MRPL25	P23369	157 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	PUT3	P25502	979 aa	Predicted RBP	4.24	□□□□□ -1.73
PTC1	YDL006W	TFB1	P32776	642 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	SGE1	P33335	543 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	PEX5	P35056	612 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	PMU1	P36069	295 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	ECM13	P38195	257 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	ATG12	P38316	186 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	RPH1	P39956	796 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	EDC3	P39998	551 aa	Known RBP	4.24	□□□□□ -1.73
PTC1	YDL006W	MOB1	P40484	314 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	RPR2	P40571	144 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	PRP24	P49960	444 aa	Known RBP	4.24	□□□□□ -1.73
PTC1	YDL006W	YMR027W	Q04371	470 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	YPQ1	Q12010	308 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	PPT2	Q12036	173 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	YPR117W	Q06116	2489 aa		4.24	□□□□□ -1.73
PTC1	YDL006W	VPS13	Q07878	3144 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	ARG4	P04076	463 aa	Predicted RBP	4.23	□□□□□ -1.73
PTC1	YDL006W	IMA3	P0CW40	589 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	IMA4	P0CW41	589 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	GEX1	P25596	615 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	TPS2	P31688	896 aa	Known RBP	4.23	□□□□□ -1.73
PTC1	YDL006W	NDI1	P32340	513 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	FRE2	P36033	711 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	KAP104	P38217	918 aa	Known RBP	4.23	□□□□□ -1.73
PTC1	YDL006W	YBP1	P38315	674 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	MTC4	P38335	694 aa	Known RBP	4.23	□□□□□ -1.73
PTC1	YDL006W	RFC3	P38629	340 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	SMF2	P38778	549 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	SMX2	P40204	77 aa	Known RBP	4.23	□□□□□ -1.73
PTC1	YDL006W	ATM1	P40416	690 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	YJR011C	P47086	261 aa	Predicted RBP	4.23	□□□□□ -1.73
PTC1	YDL006W	ECM27	P47144	725 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	YDL186W	P48568	277 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	COS10	P52924	374 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	TRM112	P53738	135 aa	Predicted RBP	4.23	□□□□□ -1.73
PTC1	YDL006W	KTR5	P53966	522 aa	Predicted RBP	4.23	□□□□□ -1.73
PTC1	YDL006W	CIK1	Q01649	594 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	PIR3	Q03180	325 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	HOT1	Q03213	719 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	ENT5	Q03769	411 aa	Known RBP	4.23	□□□□□ -1.73
PTC1	YDL006W	INP2	Q03824	705 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	SWC7	Q06707	132 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	IMA2	Q08295	589 aa		4.23	□□□□□ -1.73
PTC1	YDL006W	AYT1	Q12226	474 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 192.2 ms