RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	PHA2	P32452	334 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	PMT1	P33775	817 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	TIF3	P34167	436 aa	Known RBP	3.98	□□□□□ -1.77
SLX1	YBR228W	YSW1	P38280	609 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	SRP72	P38688	640 aa	Known RBP	3.98	□□□□□ -1.77
SLX1	YBR228W	YHR182W	P38870	785 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	TIM17	P39515	158 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	FAA2	P39518	744 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	HAT2	P39984	401 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	COG7	P53195	279 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	RCF2	P53721	224 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	FRE4	P53746	719 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	MRS2	Q01926	470 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	SPP2	Q02521	185 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	YDR131C	Q03899	556 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	RPC11	Q04307	110 aa	Predicted RBP	3.98	□□□□□ -1.77
SLX1	YBR228W	VID22	Q05934	901 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	LEU9	Q12166	604 aa	Known RBP	3.98	□□□□□ -1.77
SLX1	YBR228W	SEC53	P07283	254 aa	Known RBP	3.97	□□□□□ -1.77
SLX1	YBR228W	TRX2	P22803	104 aa	Known RBP	3.97	□□□□□ -1.77
SLX1	YBR228W	VMA16	P23968	213 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	CDC10	P25342	322 aa	Known RBP	3.97	□□□□□ -1.77
SLX1	YBR228W	SPS19	P32573	292 aa	Known RBP	3.97	□□□□□ -1.77
SLX1	YBR228W	STB6	P36085	766 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	GDT1	P38301	280 aa	Predicted RBP	3.97	□□□□□ -1.77
SLX1	YBR228W	LRP1	P38801	184 aa	Known RBP	3.97	□□□□□ -1.77
SLX1	YBR228W	YDR089W	P38966	869 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	FAR3	P46671	204 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	PET130	P47065	347 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	BNA1	P47096	177 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	NUP84	P52891	726 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	TAF6	P53040	516 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	AQR1	P53943	586 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	OSH6	Q02201	448 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	YMR155W	Q03795	547 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	CSN9	Q03981	162 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	HPT1	Q04178	221 aa	Known RBP	3.97	□□□□□ -1.77
SLX1	YBR228W	RCO1	Q04779	684 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	APC9	Q12107	265 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	MDY2	Q12285	212 aa		3.97	□□□□□ -1.77
SLX1	YBR228W	MEX67	Q99257	599 aa	Known RBP	3.97	□□□□□ -1.77
SLX1	YBR228W	POL2	P21951	2222 aa	Known RBP	3.97	□□□□□ -1.77
SLX1	YBR228W	ACC1	Q00955	2233 aa	Known RBP	3.97	□□□□□ -1.77
SLX1	YBR228W	HEM2	P05373	342 aa		3.96	□□□□□ -1.78
SLX1	YBR228W	RAD3	P06839	778 aa		3.96	□□□□□ -1.78
SLX1	YBR228W	PTM1	P32857	523 aa		3.96	□□□□□ -1.78
SLX1	YBR228W	PRP18	P33411	251 aa	Predicted RBP	3.96	□□□□□ -1.78
SLX1	YBR228W	RRN3	P36070	627 aa		3.96	□□□□□ -1.78
SLX1	YBR228W	ARC1	P46672	376 aa	Known RBP	3.96	□□□□□ -1.78
SLX1	YBR228W	AIF1	P52923	378 aa		3.96	□□□□□ -1.78
SLX1	YBR228W	BOL2	P53082	120 aa		3.96	□□□□□ -1.78
SLX1	YBR228W	SWC4	P53201	476 aa		3.96	□□□□□ -1.78
SLX1	YBR228W	RHO4	Q00246	291 aa		3.96	□□□□□ -1.78
SLX1	YBR228W	TAF12	Q03761	539 aa		3.96	□□□□□ -1.78
SLX1	YBR228W	DPB4	Q04603	196 aa	Known RBP	3.96	□□□□□ -1.78
SLX1	YBR228W	SMF3	Q12078	473 aa	Predicted RBP	3.96	□□□□□ -1.78
SLX1	YBR228W	YPL247C	Q12523	523 aa		3.96	□□□□□ -1.78
SLX1	YBR228W	SUC2	P00724	532 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	RHO2	P06781	192 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	RPB4	P20433	221 aa	Predicted RBP	3.95	□□□□□ -1.78
SLX1	YBR228W	EPT1	P22140	391 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	YCR090C	P25654	182 aa	Known RBP	3.95	□□□□□ -1.78
SLX1	YBR228W	PDB1	P32473	366 aa	Known RBP	3.95	□□□□□ -1.78
SLX1	YBR228W	CSE1	P33307	960 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	TIP20	P33891	701 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	IML3	P38265	245 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	TAE1	P38340	232 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	HSM3	P38348	480 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	EFM1	P38732	585 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	STN1	P38960	494 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	IDP2	P41939	412 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	GCD14	P46959	383 aa	Predicted RBP	3.95	□□□□□ -1.78
SLX1	YBR228W	TIS11	P47977	285 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	NBP35	P52920	328 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	ART5	P53244	586 aa	Known RBP	3.95	□□□□□ -1.78
SLX1	YBR228W	RMI1	Q02685	241 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	NHP10	Q03435	203 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	GOT1	Q03554	138 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	TVP15	Q03860	143 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	TRM12	Q04235	462 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	SEC10	Q06245	871 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	VTA1	Q06263	330 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	ENT4	Q07872	247 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	ATG10	Q07879	167 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	GTT2	Q12390	233 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	NOT5	Q12514	560 aa	Predicted RBP	3.95	□□□□□ -1.78
SLX1	YBR228W	YPT6	Q99260	215 aa		3.95	□□□□□ -1.78
SLX1	YBR228W	CPA1	P07258	411 aa	Known RBP	3.94	□□□□□ -1.78
SLX1	YBR228W	HSC82	P15108	705 aa	Known RBP	3.94	□□□□□ -1.78
SLX1	YBR228W	PWP1	P21304	576 aa	Known RBP	3.94	□□□□□ -1.78
SLX1	YBR228W	SNT1	P25357	1226 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	RPC19	P28000	142 aa	Known RBP	3.94	□□□□□ -1.78
SLX1	YBR228W	NIP1	P32497	812 aa	Known RBP	3.94	□□□□□ -1.78
SLX1	YBR228W	RML2	P32611	393 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	MRE11	P32829	692 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	SKT5	P34226	696 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	YKL100C	P34248	587 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	TUL1	P36096	758 aa		3.94	□□□□□ -1.78
SLX1	YBR228W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.94	□□□□□ -1.78	not detected
SLX1	YBR228W	CYC2	P38909	366 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms