RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	RAD1	P06777	1100 aa		5.66	□□□□□ -1.5
TFB4	YPR056W	FBA1	P14540	359 aa	Known RBP	5.66	□□□□□ -1.5
TFB4	YPR056W	FRS2	P15625	503 aa	Known RBP	5.66	□□□□□ -1.5
TFB4	YPR056W	SIN4	P32259	974 aa		5.66	□□□□□ -1.5
TFB4	YPR056W	SPS19	P32573	292 aa	Known RBP	5.66	□□□□□ -1.5
TFB4	YPR056W	SKT5	P34226	696 aa		5.66	□□□□□ -1.5
TFB4	YPR056W	LHS1	P36016	881 aa		5.66	□□□□□ -1.5
TFB4	YPR056W	RPL32	P38061	130 aa	Known RBP	5.66	□□□□□ -1.5
TFB4	YPR056W	CIN4	P39110	191 aa		5.66	□□□□□ -1.5
TFB4	YPR056W	FHL1	P39521	936 aa		5.66	□□□□□ -1.5
TFB4	YPR056W	DSE1	P40077	573 aa		5.66	□□□□□ -1.5
TFB4	YPR056W	UTP25	P40498	721 aa	Known RBP	5.66	□□□□□ -1.5
TFB4	YPR056W	SNG1	P46950	547 aa		5.66	□□□□□ -1.5
TFB4	YPR056W	KTR5	P53966	522 aa	Predicted RBP	5.66	□□□□□ -1.5
TFB4	YPR056W	YLR108C	Q12259	485 aa		5.66	□□□□□ -1.5
TFB4	YPR056W	NCB2	Q92317	146 aa		5.66	□□□□□ -1.5
TFB4	YPR056W	THP2	O13539	261 aa	Known RBP	5.65	□□□□□ -1.5
TFB4	YPR056W	SCEI	P03882	235 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	COR1	P07256	457 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	MRPL8	P22353	238 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	SGV1	P23293	657 aa	Known RBP	5.65	□□□□□ -1.5
TFB4	YPR056W	CNE1	P27825	502 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	VMA6	P32366	345 aa	Known RBP	5.65	□□□□□ -1.5
TFB4	YPR056W	GCG1	P32656	232 aa	Known RBP	5.65	□□□□□ -1.5
TFB4	YPR056W	HES1	P35843	434 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	FLO10	P36170	1169 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	PRS4	P38063	326 aa	Predicted RBP	5.65	□□□□□ -1.5
TFB4	YPR056W	YPK3	P38070	525 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	RRN10	P38204	145 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	UBA4	P38820	440 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	MBB1	P39534	108 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	YFR020W	P43600	232 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	YPT11	P48559	417 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	YGL159W	P53110	370 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	TRM112	P53738	135 aa	Predicted RBP	5.65	□□□□□ -1.5
TFB4	YPR056W	SLG1	P54867	378 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	UBP16	Q02863	499 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	MSC1	Q03104	513 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	CDC123	Q05791	360 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	BUR2	Q05949	395 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	RGC1	Q06108	1083 aa	Known RBP	5.65	□□□□□ -1.5
TFB4	YPR056W	SPO77	Q06134	477 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	YOL159C	Q08300	171 aa		5.65	□□□□□ -1.5
TFB4	YPR056W	AIM45	Q12480	344 aa	Known RBP	5.65	□□□□□ -1.5
TFB4	YPR056W	TUS1	Q06412	1307 aa		5.65	□□□□□ -1.51
TFB4	YPR056W	RAV1	P47104	1357 aa		5.65	□□□□□ -1.51
TFB4	YPR056W	YPT1	P01123	206 aa	Known RBP	5.64	□□□□□ -1.51
TFB4	YPR056W	PCT1	P13259	424 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	FAR1	P21268	830 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	SPO11	P23179	398 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	ERG9	P29704	444 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	MSS1	P32559	526 aa	Predicted RBP	5.64	□□□□□ -1.51
TFB4	YPR056W	CDC5	P32562	705 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	RGT1	P32862	1170 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	SPT10	P35208	640 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	MIC12	P38341	106 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	INM1	P38710	295 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	ERG28	P40030	148 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	GAT2	P40209	560 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	AGE2	P40529	298 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	TAF6	P53040	516 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	PXR1	P53335	271 aa	Predicted RBP	5.64	□□□□□ -1.51
TFB4	YPR056W	MRS2	Q01926	470 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	ADH6	Q04894	360 aa	Known RBP	5.64	□□□□□ -1.51
TFB4	YPR056W	DCR2	Q05924	578 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	GPM2	Q12008	311 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	MSH5	Q12175	901 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	RUP1	Q12242	671 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	RRI1	Q12468	440 aa		5.64	□□□□□ -1.51
TFB4	YPR056W	RPS3	P05750	240 aa	Known RBP	5.63	□□□□□ -1.51
TFB4	YPR056W	ATP1	P07251	545 aa	Known RBP	5.63	□□□□□ -1.51
TFB4	YPR056W	VPS1	P21576	704 aa	Known RBP	5.63	□□□□□ -1.51
TFB4	YPR056W	DAL82	P21705	255 aa		5.63	□□□□□ -1.51
TFB4	YPR056W	MSK1	P32048	576 aa		5.63	□□□□□ -1.51
TFB4	YPR056W	SPO23	P33757	523 aa		5.63	□□□□□ -1.51
TFB4	YPR056W	RRP4	P38792	359 aa	Known RBP	5.63	□□□□□ -1.51
TFB4	YPR056W	RPN11	P43588	306 aa	Known RBP	5.63	□□□□□ -1.51
TFB4	YPR056W	LSM1	P47017	172 aa	Known RBP	5.63	□□□□□ -1.51
TFB4	YPR056W	RRN9	P53437	365 aa		5.63	□□□□□ -1.51
TFB4	YPR056W	MTQ1	P53944	314 aa		5.63	□□□□□ -1.51
TFB4	YPR056W	FAR8	Q05040	523 aa		5.63	□□□□□ -1.51
TFB4	YPR056W	AAD15	Q08361	143 aa		5.63	□□□□□ -1.51
TFB4	YPR056W	RGS2	Q99188	309 aa		5.63	□□□□□ -1.51
TFB4	YPR056W	KGD2	P19262	463 aa	Predicted RBP	5.62	□□□□□ -1.51
TFB4	YPR056W	DBR1	P24309	405 aa	Known RBP	5.62	□□□□□ -1.51
TFB4	YPR056W	PUT3	P25502	979 aa	Predicted RBP	5.62	□□□□□ -1.51
TFB4	YPR056W	FUB1	P25659	250 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	LAC1	P28496	418 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	MEI4	P29467	408 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	TPS2	P31688	896 aa	Known RBP	5.62	□□□□□ -1.51
TFB4	YPR056W	ACH1	P32316	526 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	PEX2	P32800	271 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	SOR1	P35497	357 aa	Known RBP	5.62	□□□□□ -1.51
TFB4	YPR056W	FES1	P38260	290 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	TSC10	P38342	320 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	SOP4	P39543	234 aa	Predicted RBP	5.62	□□□□□ -1.51
TFB4	YPR056W	GAB1	P41733	394 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	GET1	P53192	235 aa		5.62	□□□□□ -1.51
TFB4	YPR056W	NOP19	P53317	196 aa	Predicted RBP	5.62	□□□□□ -1.51
TFB4	YPR056W	EBS1	Q03466	884 aa	Known RBP	5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms