RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C RPA49Q01080 415 aaPredicted RBP2.07□□□□□ -2.08
VPS20YMR077C IMA2Q08295 589 aa2.07□□□□□ -2.08
VPS20YMR077C DDC1Q08949 612 aa2.07□□□□□ -2.08
VPS20YMR077C YOL085CQ99345 113 aa2.07□□□□□ -2.08
VPS20YMR077C UTR5P32630 166 aa2.06□□□□□ -2.08
VPS20YMR077C PDC2P32896 925 aa2.06□□□□□ -2.08
VPS20YMR077C FAR10Q06001 478 aa2.06□□□□□ -2.08
VPS20YMR077C SNT309Q06091 175 aaPredicted RBP2.06□□□□□ -2.08
VPS20YMR077C CBF5P33322 483 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
VPS20YMR077C VID27P40157 782 aa2.05□□□□□ -2.08
VPS20YMR077C SEH1P53011 349 aaKnown RBP2.05□□□□□ -2.08
VPS20YMR077C POM152P39685 1337 aa2.05□□□□□ -2.08
VPS20YMR077C EPT1P22140 391 aa2.04□□□□□ -2.08
VPS20YMR077C WSC4P38739 605 aa2.04□□□□□ -2.08
VPS20YMR077C MRX8Q05473 314 aa2.04□□□□□ -2.08
VPS20YMR077C ATP1P07251 545 aaKnown RBP2.03□□□□□ -2.08
VPS20YMR077C FRM2P37261 193 aa2.03□□□□□ -2.08
VPS20YMR077C SMP1P38128 452 aa2.03□□□□□ -2.08
VPS20YMR077C COS4P43542 379 aa2.03□□□□□ -2.08
VPS20YMR077C INP2Q03824 705 aa2.03□□□□□ -2.08
VPS20YMR077C YDR115WQ04598 105 aa2.03□□□□□ -2.08
VPS20YMR077C HMS1Q12398 434 aa2.03□□□□□ -2.08
VPS20YMR077C AUS1Q08409 1394 aa2.02□□□□□ -2.09
VPS20YMR077C ADE4P04046 510 aaKnown RBP2.02□□□□□ -2.09
VPS20YMR077C PAB1P04147 577 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09 RIP-Chip
VPS20YMR077C FUS3P16892 353 aaKnown RBP2.02□□□□□ -2.09
VPS20YMR077C IMP2'P32351 346 aa2.02□□□□□ -2.09
VPS20YMR077C ECM8P38246 354 aa2.02□□□□□ -2.09
VPS20YMR077C PRP38Q00723 242 aaPredicted RBP2.02□□□□□ -2.09
VPS20YMR077C SKO1Q02100 647 aa2.02□□□□□ -2.09
VPS20YMR077C YLR177WQ06251 628 aa2.02□□□□□ -2.09
VPS20YMR077C SCH9P11792 824 aaKnown RBP2.01□□□□□ -2.09
VPS20YMR077C TOA1P32773 286 aa2.01□□□□□ -2.09
VPS20YMR077C MSC3Q05812 728 aa2.01□□□□□ -2.09
VPS20YMR077C YHC1Q05900 231 aaKnown RBP2.01□□□□□ -2.09
VPS20YMR077C DIS3Q08162 1001 aaKnown RBP2.01□□□□□ -2.09
VPS20YMR077C SRO7Q12038 1033 aa2.01□□□□□ -2.09
VPS20YMR077C MCT1Q12283 360 aa2.01□□□□□ -2.09
VPS20YMR077C PCL9Q12477 304 aa2.01□□□□□ -2.09
VPS20YMR077C CKA2P19454 339 aa2□□□□□ -2.09
VPS20YMR077C HEL1P36113 551 aa2□□□□□ -2.09
VPS20YMR077C SCC4P40090 624 aa2□□□□□ -2.09
VPS20YMR077C YIL059CP40520 121 aa2□□□□□ -2.09
VPS20YMR077C YGR117CP53270 476 aa2□□□□□ -2.09
VPS20YMR077C TIM10P87108 93 aa2□□□□□ -2.09
VPS20YMR077C SPR6Q01684 191 aa2□□□□□ -2.09
VPS20YMR077C VTI1Q04338 217 aa2□□□□□ -2.09
VPS20YMR077C YOR338WQ99326 363 aa2□□□□□ -2.09
VPS20YMR077C SSC1P0CS90 654 aaKnown RBP1.99□□□□□ -2.09
VPS20YMR077C GFD2P25370 566 aaKnown RBP1.99□□□□□ -2.09
VPS20YMR077C YPT35P38815 214 aaKnown RBP1.99□□□□□ -2.09
VPS20YMR077C SFM1Q12314 213 aa1.99□□□□□ -2.09
VPS20YMR077C HIF1Q12373 385 aa1.99□□□□□ -2.09
VPS20YMR077C ALG1P16661 449 aa1.98□□□□□ -2.09
VPS20YMR077C MSP1P28737 362 aa1.98□□□□□ -2.09
VPS20YMR077C SPO23P33757 523 aa1.98□□□□□ -2.09
VPS20YMR077C SHE3P38272 425 aaKnown RBP1.98□□□□□ -2.09
VPS20YMR077C KEG1P43614 200 aa1.98□□□□□ -2.09
VPS20YMR077C TRF5P48561 642 aaKnown RBP1.98□□□□□ -2.09
VPS20YMR077C REX2P54964 269 aaKnown RBP1.98□□□□□ -2.09
VPS20YMR077C KAP120Q02932 1032 aa1.98□□□□□ -2.09
VPS20YMR077C RPS18AP0CX55 146 aaKnown RBP1.97□□□□□ -2.09
VPS20YMR077C RPS18BP0CX56 146 aaPredicted RBP1.97□□□□□ -2.09
VPS20YMR077C TRM112P53738 135 aaPredicted RBP1.97□□□□□ -2.09
VPS20YMR077C VAC7P53950 1165 aa1.97□□□□□ -2.09
VPS20YMR077C SPS19P32573 292 aaKnown RBP1.96□□□□□ -2.1
VPS20YMR077C SKT5P34226 696 aa1.96□□□□□ -2.1
VPS20YMR077C RRT13P40042 185 aa1.96□□□□□ -2.1
VPS20YMR077C RNH201P53942 307 aa1.96□□□□□ -2.1
VPS20YMR077C RPN9Q04062 393 aaKnown RBP1.96□□□□□ -2.1
VPS20YMR077C RUP1Q12242 671 aa1.96□□□□□ -2.1
VPS20YMR077C DAL5P15365 543 aa1.95□□□□□ -2.1
VPS20YMR077C CLB3P24870 427 aa1.95□□□□□ -2.1
VPS20YMR077C ROX1P25042 368 aa1.95□□□□□ -2.1
VPS20YMR077C SKG6P32900 734 aaPredicted RBP1.95□□□□□ -2.1
VPS20YMR077C PPQ1P32945 549 aa1.95□□□□□ -2.1
VPS20YMR077C MMF1P40185 145 aaKnown RBP1.95□□□□□ -2.1
VPS20YMR077C MET17P06106 444 aa1.94□□□□□ -2.1
VPS20YMR077C CKA1P15790 372 aa1.94□□□□□ -2.1
VPS20YMR077C LDS1P31379 325 aa1.94□□□□□ -2.1
VPS20YMR077C RAD23P32628 398 aaKnown RBP1.94□□□□□ -2.1
VPS20YMR077C MCR1P36060 302 aaKnown RBP1.94□□□□□ -2.1
VPS20YMR077C YER079WP40052 210 aaKnown RBP1.94□□□□□ -2.1
VPS20YMR077C DCS1Q06151 350 aa1.94□□□□□ -2.1
VPS20YMR077C MED2Q12124 431 aa1.94□□□□□ -2.1
VPS20YMR077C DST1P07273 309 aa1.93□□□□□ -2.1
VPS20YMR077C BRF1P29056 596 aa1.93□□□□□ -2.1
VPS20YMR077C DBP7P36120 742 aaKnown RBP1.93□□□□□ -2.1
VPS20YMR077C SDH4P37298 181 aa1.93□□□□□ -2.1
VPS20YMR077C YBR241CP38142 488 aa1.93□□□□□ -2.1
VPS20YMR077C YJR030CP47101 745 aa1.93□□□□□ -2.1
VPS20YMR077C ASN2P49090 572 aaKnown RBP1.93□□□□□ -2.1
VPS20YMR077C YMR010WQ03687 405 aa1.93□□□□□ -2.1
VPS20YMR077C YMR130WQ04223 302 aa1.93□□□□□ -2.1
VPS20YMR077C DON1Q05610 365 aa1.93□□□□□ -2.1
VPS20YMR077C ASA1Q06822 443 aa1.93□□□□□ -2.1
VPS20YMR077C LDS2Q08218 356 aa1.93□□□□□ -2.1
VPS20YMR077C MEX67Q99257 599 aaKnown RBP1.93□□□□□ -2.1
VPS20YMR077C URA4P20051 364 aa1.92□□□□□ -2.1
VPS20YMR077C GPX2P38143 162 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms