RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C ECT1P33412 323 aa2.25□□□□□ -2.05
UBX4YMR067C SKT5P34226 696 aa2.25□□□□□ -2.05
UBX4YMR067C ASC1P38011 319 aaKnown RBP2.25□□□□□ -2.05
UBX4YMR067C MMF1P40185 145 aaKnown RBP2.25□□□□□ -2.05
UBX4YMR067C CAK1P43568 368 aaPredicted RBP2.25□□□□□ -2.05
UBX4YMR067C SRB7P47822 140 aa2.25□□□□□ -2.05
UBX4YMR067C ATP22P50273 684 aaPredicted RBP2.25□□□□□ -2.05
UBX4YMR067C HSP104P31539 908 aaKnown RBP2.24□□□□□ -2.05
UBX4YMR067C PFF1P38244 976 aa2.24□□□□□ -2.05
UBX4YMR067C SLM4P38247 162 aa2.24□□□□□ -2.05
UBX4YMR067C CHL4P38907 458 aa2.24□□□□□ -2.05
UBX4YMR067C YER079WP40052 210 aaKnown RBP2.24□□□□□ -2.05
UBX4YMR067C VHS2P40463 436 aa2.24□□□□□ -2.05
UBX4YMR067C YGR117CP53270 476 aa2.24□□□□□ -2.05
UBX4YMR067C HST1P53685 503 aa2.24□□□□□ -2.05
UBX4YMR067C YMR155WQ03795 547 aa2.24□□□□□ -2.05
UBX4YMR067C BUD21Q08492 214 aaPredicted RBP2.24□□□□□ -2.05
UBX4YMR067C FCY22Q12119 530 aa2.24□□□□□ -2.05
UBX4YMR067C ALG1P16661 449 aa2.23□□□□□ -2.05
UBX4YMR067C SKN1P33336 771 aa2.23□□□□□ -2.05
UBX4YMR067C LSM12P38828 187 aaKnown RBP2.23□□□□□ -2.05
UBX4YMR067C PFS1P38872 237 aa2.23□□□□□ -2.05
UBX4YMR067C STN1P38960 494 aa2.23□□□□□ -2.05
UBX4YMR067C PFS2P42841 465 aaKnown RBP2.23□□□□□ -2.05
UBX4YMR067C BNI5P53890 448 aaKnown RBP2.23□□□□□ -2.05
UBX4YMR067C PRP3Q03338 469 aaPredicted RBP2.23□□□□□ -2.05
UBX4YMR067C TPI1P00942 248 aaKnown RBP2.22□□□□□ -2.05
UBX4YMR067C CDC21P06785 304 aa2.22□□□□□ -2.05
UBX4YMR067C GIT1P25346 518 aa2.22□□□□□ -2.05
UBX4YMR067C URA7P28274 579 aaKnown RBP2.22□□□□□ -2.05
UBX4YMR067C HEL1P36113 551 aa2.22□□□□□ -2.05
UBX4YMR067C SPR6Q01684 191 aa2.22□□□□□ -2.05
UBX4YMR067C MDM1Q01846 1127 aa2.22□□□□□ -2.05
UBX4YMR067C YDL199CQ12407 687 aa2.22□□□□□ -2.05
UBX4YMR067C PCL9Q12477 304 aa2.22□□□□□ -2.05
UBX4YMR067C INH1P01097 85 aa2.21□□□□□ -2.06
UBX4YMR067C SSC1P0CS90 654 aaKnown RBP2.21□□□□□ -2.06
UBX4YMR067C FUR1P18562 216 aaKnown RBP2.21□□□□□ -2.06
UBX4YMR067C FMT1P32785 401 aa2.21□□□□□ -2.06
UBX4YMR067C MCR1P36060 302 aaKnown RBP2.21□□□□□ -2.06
UBX4YMR067C BYE1P36106 594 aa2.21□□□□□ -2.06
UBX4YMR067C INM1P38710 295 aa2.21□□□□□ -2.06
UBX4YMR067C YER184CP39961 794 aa2.21□□□□□ -2.06
UBX4YMR067C TRM112P53738 135 aaPredicted RBP2.21□□□□□ -2.06
UBX4YMR067C AEP3Q12089 606 aa2.21□□□□□ -2.06
UBX4YMR067C RFM1Q12192 310 aa2.21□□□□□ -2.06
UBX4YMR067C RPS19AP07280 144 aaKnown RBP2.2□□□□□ -2.06
UBX4YMR067C RPS19BP07281 144 aaPredicted RBP2.2□□□□□ -2.06
UBX4YMR067C ADK2P26364 225 aa2.2□□□□□ -2.06
UBX4YMR067C TPS2P31688 896 aaKnown RBP2.2□□□□□ -2.06
UBX4YMR067C SOL2P37262 315 aa2.2□□□□□ -2.06
UBX4YMR067C NAB3P38996 802 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
UBX4YMR067C PEX22P39718 180 aa2.2□□□□□ -2.06
UBX4YMR067C STE24P47154 453 aa2.2□□□□□ -2.06
UBX4YMR067C SUB1P54000 292 aaKnown RBP2.2□□□□□ -2.06
UBX4YMR067C RPL21AQ02753 160 aaKnown RBP2.2□□□□□ -2.06
UBX4YMR067C YDR341CQ05506 607 aaKnown RBP2.2□□□□□ -2.06
UBX4YMR067C VPS54Q12071 889 aa2.2□□□□□ -2.06
UBX4YMR067C RRG1Q12167 365 aaPredicted RBP2.2□□□□□ -2.06
UBX4YMR067C HMS1Q12398 434 aa2.2□□□□□ -2.06
UBX4YMR067C RPL21BQ12672 160 aaKnown RBP2.2□□□□□ -2.06
UBX4YMR067C ARO3P14843 370 aaKnown RBP2.19□□□□□ -2.06
UBX4YMR067C PUT4P15380 627 aa2.19□□□□□ -2.06
UBX4YMR067C CMK2P22517 447 aa2.19□□□□□ -2.06
UBX4YMR067C SPO23P33757 523 aa2.19□□□□□ -2.06
UBX4YMR067C JNM1P36224 373 aa2.19□□□□□ -2.06
UBX4YMR067C GPX2P38143 162 aa2.19□□□□□ -2.06
UBX4YMR067C ZTA1P38230 334 aaKnown RBP2.19□□□□□ -2.06
UBX4YMR067C STP2P38704 541 aa2.19□□□□□ -2.06
UBX4YMR067C YGR067CP53243 804 aa2.19□□□□□ -2.06
UBX4YMR067C ENT5Q03769 411 aaKnown RBP2.19□□□□□ -2.06
UBX4YMR067C ERB1Q04660 807 aaKnown RBP2.19□□□□□ -2.06
UBX4YMR067C NSE1Q07913 336 aa2.19□□□□□ -2.06
UBX4YMR067C SFM1Q12314 213 aa2.19□□□□□ -2.06
UBX4YMR067C YOP1Q12402 180 aa2.19□□□□□ -2.06
UBX4YMR067C MEX67Q99257 599 aaKnown RBP2.19□□□□□ -2.06
UBX4YMR067C CPR2P23285 205 aa2.18□□□□□ -2.06
UBX4YMR067C CLB1P24868 471 aa2.18□□□□□ -2.06
UBX4YMR067C FRT2P39734 528 aa2.18□□□□□ -2.06
UBX4YMR067C TRF5P48561 642 aaKnown RBP2.18□□□□□ -2.06
UBX4YMR067C SLF1Q12034 447 aaKnown RBP2.18□□□□□ -2.06
UBX4YMR067C LDB17Q12342 491 aa2.18□□□□□ -2.06
UBX4YMR067C HIF1Q12373 385 aa2.18□□□□□ -2.06
UBX4YMR067C TPK3P05986 398 aa2.17□□□□□ -2.06
UBX4YMR067C ASP3-2P0CX77 362 aa2.17□□□□□ -2.06
UBX4YMR067C ASP3-3P0CX78 362 aa2.17□□□□□ -2.06
UBX4YMR067C ASP3-4P0CX79 362 aa2.17□□□□□ -2.06
UBX4YMR067C ASP3-1P0CZ17 362 aa2.17□□□□□ -2.06
UBX4YMR067C SLM5P25345 492 aaKnown RBP2.17□□□□□ -2.06
UBX4YMR067C RIM1P32445 135 aaKnown RBP2.17□□□□□ -2.06
UBX4YMR067C CYM1P32898 989 aa2.17□□□□□ -2.06
UBX4YMR067C ECM8P38246 354 aa2.17□□□□□ -2.06
UBX4YMR067C WSS1P38838 269 aa2.17□□□□□ -2.06
UBX4YMR067C GPI16P38875 610 aa2.17□□□□□ -2.06
UBX4YMR067C SER3P40054 469 aa2.17□□□□□ -2.06
UBX4YMR067C ATM1P40416 690 aa2.17□□□□□ -2.06
UBX4YMR067C TCB2P48231 1178 aa2.17□□□□□ -2.06
UBX4YMR067C RRN9P53437 365 aa2.17□□□□□ -2.06
UBX4YMR067C REX2P54964 269 aaKnown RBP2.17□□□□□ -2.06
UBX4YMR067C YDR131CQ03899 556 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 156.2 ms