RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeastyeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP6YLR085C SRL4Q03085 281 aa9.39□□□□□ -0.91
ARP6YLR085C YMD8Q03697 442 aa9.39□□□□□ -0.91
ARP6YLR085C MMT2Q08970 484 aa9.39□□□□□ -0.91
ARP6YLR085C MSH5Q12175 901 aa9.39□□□□□ -0.91
ARP6YLR085C IES3Q12345 250 aa9.39□□□□□ -0.91
ARP6YLR085C TRM10Q12400 293 aa9.39□□□□□ -0.91
ARP6YLR085C YPL119C-AQ3E751 87 aa9.39□□□□□ -0.91
ARP6YLR085C SLH1P53327 1967 aaKnown RBP9.39□□□□□ -0.91
ARP6YLR085C RPC40P07703 335 aaKnown RBP9.38□□□□□ -0.91
ARP6YLR085C GAL7P08431 366 aa9.38□□□□□ -0.91
ARP6YLR085C VPS33P20795 691 aa9.38□□□□□ -0.91
ARP6YLR085C NPR1P22211 790 aa9.38□□□□□ -0.91
ARP6YLR085C BUD5P25300 642 aaPredicted RBP9.38□□□□□ -0.91
ARP6YLR085C ITR2P30606 609 aa9.38□□□□□ -0.91
ARP6YLR085C PRO1P32264 428 aa9.38□□□□□ -0.91
ARP6YLR085C SUI1P32911 108 aaKnown RBP9.38□□□□□ -0.91
ARP6YLR085C OAR1P35731 278 aa9.38□□□□□ -0.91
ARP6YLR085C CTF8P38877 133 aa9.38□□□□□ -0.91
ARP6YLR085C AST2P39945 430 aaKnown RBP9.38□□□□□ -0.91
ARP6YLR085C LRO1P40345 661 aa9.38□□□□□ -0.91
ARP6YLR085C CIS3P47001 227 aa9.38□□□□□ -0.91
ARP6YLR085C STE24P47154 453 aa9.38□□□□□ -0.91
ARP6YLR085C CDH1P53197 566 aa9.38□□□□□ -0.91
ARP6YLR085C YGR168CP53293 376 aa9.38□□□□□ -0.91
ARP6YLR085C YGR250CP53316 781 aaKnown RBP9.38□□□□□ -0.91
ARP6YLR085C MRX10Q05648 414 aa9.38□□□□□ -0.91
ARP6YLR085C YLR345WQ06137 509 aa9.38□□□□□ -0.91
ARP6YLR085C ARO10Q06408 635 aa9.38□□□□□ -0.91
ARP6YLR085C THI73Q07904 523 aa9.38□□□□□ -0.91
ARP6YLR085C YTM1Q12024 460 aaPredicted RBP9.38□□□□□ -0.91
ARP6YLR085C DIN7Q12086 430 aa9.38□□□□□ -0.91
ARP6YLR085C NFI1Q12216 726 aa9.38□□□□□ -0.91
ARP6YLR085C YOL107WQ12239 342 aa9.38□□□□□ -0.91
ARP6YLR085C RRP12Q12754 1228 aaKnown RBP9.38□□□□□ -0.91
ARP6YLR085C LAG2Q92325 660 aa9.38□□□□□ -0.91
ARP6YLR085C ENA1P13587 1091 aa9.37□□□□□ -0.91
ARP6YLR085C TEF4P36008 412 aaKnown RBP9.37□□□□□ -0.91
ARP6YLR085C PRE6P40303 254 aaKnown RBP9.37□□□□□ -0.91
ARP6YLR085C HOS2P53096 452 aaPredicted RBP9.37□□□□□ -0.91
ARP6YLR085C ENA2Q01896 1091 aa9.37□□□□□ -0.91
ARP6YLR085C VPS36Q06696 566 aa9.37□□□□□ -0.91
ARP6YLR085C FMP45Q07651 309 aa9.37□□□□□ -0.91
ARP6YLR085C NTG2Q08214 380 aa9.37□□□□□ -0.91
ARP6YLR085C YOR389WQ08912 624 aa9.37□□□□□ -0.91
ARP6YLR085C YGK3Q12222 375 aaPredicted RBP9.37□□□□□ -0.91
ARP6YLR085C ENA5Q12691 1091 aa9.37□□□□□ -0.91
ARP6YLR085C YMR084WA2P2R3 262 aa9.36□□□□□ -0.91
ARP6YLR085C SIR3P06701 978 aa9.36□□□□□ -0.91
ARP6YLR085C SAM35P14693 329 aa9.36□□□□□ -0.91
ARP6YLR085C PTP1P25044 335 aa9.36□□□□□ -0.91
ARP6YLR085C RRP7P25368 297 aaPredicted RBP9.36□□□□□ -0.91
ARP6YLR085C CDC12P32468 407 aaKnown RBP9.36□□□□□ -0.91
ARP6YLR085C NRP1P32770 719 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
ARP6YLR085C TPO5P36029 618 aa9.36□□□□□ -0.91
ARP6YLR085C DOA1P36037 715 aa9.36□□□□□ -0.91
ARP6YLR085C SBE22P38814 852 aa9.36□□□□□ -0.91
ARP6YLR085C MNL1P38888 796 aa9.36□□□□□ -0.91
ARP6YLR085C ISC1P40015 477 aaKnown RBP9.36□□□□□ -0.91
ARP6YLR085C UBC9P50623 157 aaPredicted RBP9.36□□□□□ -0.91
ARP6YLR085C ROM1P53046 1155 aa9.36□□□□□ -0.91
ARP6YLR085C MTQ1P53944 314 aa9.36□□□□□ -0.91
ARP6YLR085C FMP42Q04991 504 aa9.36□□□□□ -0.91
ARP6YLR085C YDR262WQ12331 272 aa9.36□□□□□ -0.91
ARP6YLR085C YCK1P23291 538 aa9.35□□□□□ -0.91
ARP6YLR085C CDC13P32797 924 aaKnown RBP9.35□□□□□ -0.91
ARP6YLR085C SKN1P33336 771 aa9.35□□□□□ -0.91
ARP6YLR085C YBR139WP38109 508 aa9.35□□□□□ -0.91
ARP6YLR085C WSC4P38739 605 aa9.35□□□□□ -0.91
ARP6YLR085C PCF11P39081 626 aaPredicted RBP9.35□□□□□ -0.91
ARP6YLR085C RRG9P40156 214 aa9.35□□□□□ -0.91
ARP6YLR085C TED1P40533 473 aa9.35□□□□□ -0.91
ARP6YLR085C RET2P43621 546 aa9.35□□□□□ -0.91
ARP6YLR085C YGR054WP53235 642 aaKnown RBP9.35□□□□□ -0.91
ARP6YLR085C SYF2P53277 215 aaPredicted RBP9.35□□□□□ -0.91
ARP6YLR085C NUP49Q02199 472 aa9.35□□□□□ -0.91
ARP6YLR085C MGR3Q04472 501 aa9.35□□□□□ -0.91
ARP6YLR085C YMR310CQ04867 317 aaPredicted RBP9.35□□□□□ -0.91
ARP6YLR085C RNH202Q05635 350 aa9.35□□□□□ -0.91
ARP6YLR085C GSH2Q08220 491 aa9.35□□□□□ -0.91
ARP6YLR085C FDH1Q08911 376 aa9.35□□□□□ -0.91
ARP6YLR085C YKL033W-AQ86ZR7 236 aa9.35□□□□□ -0.91
ARP6YLR085C RPB5P20434 215 aa9.34□□□□□ -0.91
ARP6YLR085C IDP1P21954 428 aaKnown RBP9.34□□□□□ -0.91
ARP6YLR085C TAH1P25638 111 aaPredicted RBP9.34□□□□□ -0.91
ARP6YLR085C SBA1P28707 216 aaKnown RBP9.34□□□□□ -0.91
ARP6YLR085C LYP1P32487 611 aa9.34□□□□□ -0.91
ARP6YLR085C TAT2P38967 592 aa9.34□□□□□ -0.91
ARP6YLR085C SNM1P40993 198 aa9.34□□□□□ -0.91
ARP6YLR085C NQM1P53228 333 aaPredicted RBP9.34□□□□□ -0.91
ARP6YLR085C ISU1Q03020 165 aa9.34□□□□□ -0.91
ARP6YLR085C NEJ1Q06148 342 aa9.34□□□□□ -0.91
ARP6YLR085C EMG1Q06287 252 aaKnown RBP9.34□□□□□ -0.91
ARP6YLR085C YDL176WQ12027 708 aa9.34□□□□□ -0.91
ARP6YLR085C YOR019WQ99248 730 aa9.34□□□□□ -0.91
ARP6YLR085C YPR117WQ06116 2489 aa9.33□□□□□ -0.92
ARP6YLR085C REP1P03871 373 aa9.33□□□□□ -0.92
ARP6YLR085C HOP1P20050 605 aa9.33□□□□□ -0.92
ARP6YLR085C HCM1P25364 564 aa9.33□□□□□ -0.92
ARP6YLR085C SSH4P32343 579 aa9.33□□□□□ -0.92
ARP6YLR085C AUR1P36107 401 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms