RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C BIR1P47134 954 aa3.67□□□□□ -1.82
SED5YLR026C SUB1P54000 292 aaKnown RBP3.67□□□□□ -1.82
SED5YLR026C SKO1Q02100 647 aa3.67□□□□□ -1.82
SED5YLR026C CCE1Q03702 353 aa3.67□□□□□ -1.82
SED5YLR026C YMR155WQ03795 547 aa3.67□□□□□ -1.82
SED5YLR026C RIF2Q06208 395 aa3.67□□□□□ -1.82
SED5YLR026C SMF3Q12078 473 aaPredicted RBP3.67□□□□□ -1.82
SED5YLR026C JID1Q12350 301 aa3.67□□□□□ -1.82
SED5YLR026C ISN1Q99312 450 aa3.67□□□□□ -1.82
SED5YLR026C TY1B-AO13527 1196 aaKnown RBP3.66□□□□□ -1.82
SED5YLR026C MSI1P13712 422 aa3.66□□□□□ -1.82
SED5YLR026C OXA1P39952 402 aa3.66□□□□□ -1.82
SED5YLR026C YFR057WP43625 151 aa3.66□□□□□ -1.82
SED5YLR026C MRM2P53123 320 aa3.66□□□□□ -1.82
SED5YLR026C YLR287CQ05881 355 aa3.66□□□□□ -1.82
SED5YLR026C SNT309Q06091 175 aaPredicted RBP3.66□□□□□ -1.82
SED5YLR026C RAX1Q08760 435 aa3.66□□□□□ -1.82
SED5YLR026C TPT1Q12272 230 aaKnown RBP3.66□□□□□ -1.82
SED5YLR026C FIG2P25653 1609 aa3.66□□□□□ -1.82
SED5YLR026C IMA3P0CW40 589 aa3.65□□□□□ -1.83
SED5YLR026C IMA4P0CW41 589 aa3.65□□□□□ -1.83
SED5YLR026C URA4P20051 364 aa3.65□□□□□ -1.83
SED5YLR026C AAT2P23542 418 aaKnown RBP3.65□□□□□ -1.83
SED5YLR026C ICL1P28240 557 aaPredicted RBP3.65□□□□□ -1.83
SED5YLR026C PHA2P32452 334 aa3.65□□□□□ -1.83
SED5YLR026C PFF1P38244 976 aa3.65□□□□□ -1.83
SED5YLR026C MMS4P38257 691 aa3.65□□□□□ -1.83
SED5YLR026C BAT1P38891 393 aaKnown RBP3.65□□□□□ -1.83
SED5YLR026C COX14P39103 70 aa3.65□□□□□ -1.83
SED5YLR026C ROY1Q04847 553 aa3.65□□□□□ -1.83
SED5YLR026C COG4Q06096 861 aa3.65□□□□□ -1.83
SED5YLR026C IMA2Q08295 589 aa3.65□□□□□ -1.83
SED5YLR026C ATG34Q12292 412 aa3.65□□□□□ -1.83
SED5YLR026C SNU66Q12420 587 aaPredicted RBP3.65□□□□□ -1.83
SED5YLR026C MLP1Q02455 1875 aaKnown RBP3.64□□□□□ -1.83
SED5YLR026C SHC1P39000 512 aa3.64□□□□□ -1.83
SED5YLR026C SIM1P40472 476 aa3.64□□□□□ -1.83
SED5YLR026C YIL089WP40500 205 aa3.64□□□□□ -1.83
SED5YLR026C OCA2P53949 197 aa3.64□□□□□ -1.83
SED5YLR026C DON1Q05610 365 aa3.64□□□□□ -1.83
SED5YLR026C NDE2Q07500 545 aa3.64□□□□□ -1.83
SED5YLR026C YGK3Q12222 375 aaPredicted RBP3.64□□□□□ -1.83
SED5YLR026C INH1P01097 85 aa3.63□□□□□ -1.83
SED5YLR026C HOM3P10869 527 aa3.63□□□□□ -1.83
SED5YLR026C YCR051WP25631 222 aa3.63□□□□□ -1.83
SED5YLR026C RPN12P32496 274 aa3.63□□□□□ -1.83
SED5YLR026C IES6P32617 166 aa3.63□□□□□ -1.83
SED5YLR026C RRP1P35178 278 aaPredicted RBP3.63□□□□□ -1.83
SED5YLR026C YER186CP40101 306 aa3.63□□□□□ -1.83
SED5YLR026C BNS1P50084 137 aa3.63□□□□□ -1.83
SED5YLR026C KAP120Q02932 1032 aa3.63□□□□□ -1.83
SED5YLR026C URH1Q04179 340 aa3.63□□□□□ -1.83
SED5YLR026C YMR130WQ04223 302 aa3.63□□□□□ -1.83
SED5YLR026C CDC31P06704 161 aaKnown RBP3.62□□□□□ -1.83
SED5YLR026C OSM1P21375 501 aaKnown RBP3.62□□□□□ -1.83
SED5YLR026C REC107P21651 314 aa3.62□□□□□ -1.83
SED5YLR026C EGT2P42835 1041 aa3.62□□□□□ -1.83
SED5YLR026C LCB3P47013 409 aa3.62□□□□□ -1.83
SED5YLR026C CRH1P53301 507 aa3.62□□□□□ -1.83
SED5YLR026C RTN1Q04947 295 aaKnown RBP3.62□□□□□ -1.83
SED5YLR026C DCS1Q06151 350 aa3.62□□□□□ -1.83
SED5YLR026C RRP9Q06506 573 aaKnown RBP3.62□□□□□ -1.83
SED5YLR026C YBL111CQ3E7Y5 667 aa3.62□□□□□ -1.83
SED5YLR026C GSC2P40989 1895 aa3.61□□□□□ -1.83
SED5YLR026C BRF1P29056 596 aa3.61□□□□□ -1.83
SED5YLR026C DPH5P32469 300 aaPredicted RBP3.61□□□□□ -1.83
SED5YLR026C NAB3P38996 802 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SED5YLR026C BUD27P43573 796 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SED5YLR026C YGR250CP53316 781 aaKnown RBP3.61□□□□□ -1.83
SED5YLR026C ERO1Q03103 563 aa3.61□□□□□ -1.83
SED5YLR026C MDM36Q06820 579 aa3.61□□□□□ -1.83
SED5YLR026C SFI1Q12369 946 aa3.61□□□□□ -1.83
SED5YLR026C AFI1Q99222 893 aa3.61□□□□□ -1.83
SED5YLR026C HKR1P41809 1802 aa3.6□□□□□ -1.83
SED5YLR026C CCH1P50077 2039 aa3.6□□□□□ -1.83
SED5YLR026C COX3P00420 269 aa3.6□□□□□ -1.83
SED5YLR026C EXG1P23776 448 aaKnown RBP3.6□□□□□ -1.83
SED5YLR026C SEO1P39709 593 aa3.6□□□□□ -1.83
SED5YLR026C MST27P53176 234 aa3.6□□□□□ -1.83
SED5YLR026C BNI5P53890 448 aaKnown RBP3.6□□□□□ -1.83
SED5YLR026C MRPS16Q02608 121 aa3.6□□□□□ -1.83
SED5YLR026C ACL4Q03771 387 aa3.6□□□□□ -1.83
SED5YLR026C VHS1Q03785 461 aa3.6□□□□□ -1.83
SED5YLR026C YET2Q04210 160 aa3.6□□□□□ -1.83
SED5YLR026C RRG1Q12167 365 aaPredicted RBP3.6□□□□□ -1.83
SED5YLR026C ADE4P04046 510 aaKnown RBP3.59□□□□□ -1.83
SED5YLR026C RPB5P20434 215 aa3.59□□□□□ -1.83
SED5YLR026C PRR1P28708 518 aa3.59□□□□□ -1.83
SED5YLR026C YKL097CP34245 136 aa3.59□□□□□ -1.83
SED5YLR026C ATP3P38077 311 aaKnown RBP3.59□□□□□ -1.83
SED5YLR026C LSM5P40089 93 aaKnown RBP3.59□□□□□ -1.83
SED5YLR026C HAC1P41546 238 aa3.59□□□□□ -1.83
SED5YLR026C ATG18P43601 500 aa3.59□□□□□ -1.83
SED5YLR026C AIM24P47127 394 aa3.59□□□□□ -1.83
SED5YLR026C MDM1Q01846 1127 aa3.59□□□□□ -1.83
SED5YLR026C STD1Q02794 444 aa3.59□□□□□ -1.83
SED5YLR026C YPR117WQ06116 2489 aa3.59□□□□□ -1.84
SED5YLR026C COX4P04037 155 aa3.58□□□□□ -1.84
SED5YLR026C CAP2P13517 287 aa3.58□□□□□ -1.84
SED5YLR026C TFB1P32776 642 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 110.1 ms