RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C SPP381P38282 291 aaPredicted RBP2.12□□□□□ -2.07
CMS1YLR003C LRP1P38801 184 aaKnown RBP2.12□□□□□ -2.07
CMS1YLR003C WSS1P38838 269 aa2.12□□□□□ -2.07
CMS1YLR003C JEM1P40358 645 aa2.12□□□□□ -2.07
CMS1YLR003C SEC28P40509 296 aaKnown RBP2.12□□□□□ -2.07
CMS1YLR003C PAC11P40960 533 aa2.12□□□□□ -2.07
CMS1YLR003C YFR057WP43625 151 aa2.12□□□□□ -2.07
CMS1YLR003C AIM24P47127 394 aa2.12□□□□□ -2.07
CMS1YLR003C YDR341CQ05506 607 aaKnown RBP2.12□□□□□ -2.07
CMS1YLR003C ECM7Q06200 448 aa2.12□□□□□ -2.07
CMS1YLR003C MDM36Q06820 579 aa2.12□□□□□ -2.07
CMS1YLR003C CUE5Q08412 411 aaKnown RBP2.12□□□□□ -2.07
CMS1YLR003C YDR061WQ12298 539 aa2.12□□□□□ -2.07
CMS1YLR003C YCR024C-BQ3E7Z8 88 aa2.12□□□□□ -2.07
CMS1YLR003C PIS1P06197 220 aaKnown RBP2.11□□□□□ -2.07
CMS1YLR003C RPL1AP0CX43 217 aaKnown RBP2.11□□□□□ -2.07
CMS1YLR003C RPL1BP0CX44 217 aaKnown RBP2.11□□□□□ -2.07
CMS1YLR003C PHA2P32452 334 aa2.11□□□□□ -2.07
CMS1YLR003C YEF1P32622 495 aa2.11□□□□□ -2.07
CMS1YLR003C SKT5P34226 696 aa2.11□□□□□ -2.07
CMS1YLR003C RTC2P38279 296 aa2.11□□□□□ -2.07
CMS1YLR003C EPL1P43572 832 aa2.11□□□□□ -2.07
CMS1YLR003C YGR117CP53270 476 aa2.11□□□□□ -2.07
CMS1YLR003C VPS9P54787 451 aa2.11□□□□□ -2.07
CMS1YLR003C YMR102CQ03177 834 aa2.11□□□□□ -2.07
CMS1YLR003C NSE1Q07913 336 aa2.11□□□□□ -2.07
CMS1YLR003C SMC5Q08204 1093 aa2.11□□□□□ -2.07
CMS1YLR003C YGK3Q12222 375 aaPredicted RBP2.11□□□□□ -2.07
CMS1YLR003C RNH203Q12338 110 aa2.11□□□□□ -2.07
CMS1YLR003C YBL111CQ3E7Y5 667 aa2.11□□□□□ -2.07
CMS1YLR003C ARF1P11076 181 aaKnown RBP2.1□□□□□ -2.07
CMS1YLR003C MSI1P13712 422 aa2.1□□□□□ -2.07
CMS1YLR003C NIP1P32497 812 aaKnown RBP2.1□□□□□ -2.07
CMS1YLR003C IES6P32617 166 aa2.1□□□□□ -2.07
CMS1YLR003C SPT10P35208 640 aa2.1□□□□□ -2.07
CMS1YLR003C RXT2P38255 430 aa2.1□□□□□ -2.07
CMS1YLR003C BMT2P38278 337 aa2.1□□□□□ -2.07
CMS1YLR003C GEP4P38812 185 aa2.1□□□□□ -2.07
CMS1YLR003C MIG3P39943 394 aa2.1□□□□□ -2.07
CMS1YLR003C OXA1P39952 402 aa2.1□□□□□ -2.07
CMS1YLR003C EGT2P42835 1041 aa2.1□□□□□ -2.07
CMS1YLR003C TDA1Q03533 586 aa2.1□□□□□ -2.07
CMS1YLR003C YMR010WQ03687 405 aa2.1□□□□□ -2.07
CMS1YLR003C PRM6Q04705 352 aa2.1□□□□□ -2.07
CMS1YLR003C LOT6Q07923 191 aa2.1□□□□□ -2.07
CMS1YLR003C JID1Q12350 301 aa2.1□□□□□ -2.07
CMS1YLR003C YOP1Q12402 180 aa2.1□□□□□ -2.07
CMS1YLR003C SSC1P0CS90 654 aaKnown RBP2.09□□□□□ -2.07
CMS1YLR003C AAT2P23542 418 aaKnown RBP2.09□□□□□ -2.07
CMS1YLR003C RRP7P25368 297 aaPredicted RBP2.09□□□□□ -2.07
CMS1YLR003C RAD5P32849 1169 aaPredicted RBP2.09□□□□□ -2.07
CMS1YLR003C YNL208WP40159 199 aaKnown RBP2.09□□□□□ -2.07
CMS1YLR003C UTP18P40362 594 aaPredicted RBP2.09□□□□□ -2.07
CMS1YLR003C DFG10P40526 253 aa2.09□□□□□ -2.07
CMS1YLR003C STE24P47154 453 aa2.09□□□□□ -2.07
CMS1YLR003C ASN2P49090 572 aaKnown RBP2.09□□□□□ -2.07
CMS1YLR003C TOS2P50078 622 aa2.09□□□□□ -2.07
CMS1YLR003C PMT5P52867 743 aa2.09□□□□□ -2.07
CMS1YLR003C CRH1P53301 507 aa2.09□□□□□ -2.07
CMS1YLR003C LDS2Q08218 356 aa2.09□□□□□ -2.07
CMS1YLR003C FDH1Q08911 376 aa2.09□□□□□ -2.07
CMS1YLR003C CCH1P50077 2039 aa2.08□□□□□ -2.08
CMS1YLR003C RPL6BP05739 176 aaKnown RBP2.08□□□□□ -2.08
CMS1YLR003C RPL12AP0CX53 165 aaKnown RBP2.08□□□□□ -2.08
CMS1YLR003C RPL12BP0CX54 165 aa2.08□□□□□ -2.08
CMS1YLR003C DPH2P32461 534 aa2.08□□□□□ -2.08
CMS1YLR003C NUP2P32499 720 aa2.08□□□□□ -2.08
CMS1YLR003C YHK8P38776 514 aa2.08□□□□□ -2.08
CMS1YLR003C MST27P53176 234 aa2.08□□□□□ -2.08
CMS1YLR003C RTT102P53330 157 aa2.08□□□□□ -2.08
CMS1YLR003C RPL6AQ02326 176 aaKnown RBP2.08□□□□□ -2.08
CMS1YLR003C RCF1Q03713 159 aa2.08□□□□□ -2.08
CMS1YLR003C URC2Q04411 772 aa2.08□□□□□ -2.08
CMS1YLR003C YPR091CQ06833 770 aa2.08□□□□□ -2.08
CMS1YLR003C AAD15Q08361 143 aa2.08□□□□□ -2.08
CMS1YLR003C PCL9Q12477 304 aa2.08□□□□□ -2.08
CMS1YLR003C PAB1P04147 577 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08 RIP-Chip
CMS1YLR003C PRR1P28708 518 aa2.07□□□□□ -2.08
CMS1YLR003C MSP1P28737 362 aa2.07□□□□□ -2.08
CMS1YLR003C MCR1P36060 302 aaKnown RBP2.07□□□□□ -2.08
CMS1YLR003C GPX2P38143 162 aa2.07□□□□□ -2.08
CMS1YLR003C WSC4P38739 605 aa2.07□□□□□ -2.08
CMS1YLR003C MLH1P38920 769 aa2.07□□□□□ -2.08
CMS1YLR003C SNL1P40548 159 aa2.07□□□□□ -2.08
CMS1YLR003C GAB1P41733 394 aa2.07□□□□□ -2.08
CMS1YLR003C FCY22Q12119 530 aa2.07□□□□□ -2.08
CMS1YLR003C FRE6Q12473 712 aa2.07□□□□□ -2.08
CMS1YLR003C NAG1Q8TGN9 163 aa2.07□□□□□ -2.08
CMS1YLR003C SRN2Q99176 213 aa2.07□□□□□ -2.08
CMS1YLR003C TIR2P33890 251 aa2.06□□□□□ -2.08
CMS1YLR003C YHR177WP38867 453 aa2.06□□□□□ -2.08
CMS1YLR003C PFS1P38872 237 aa2.06□□□□□ -2.08
CMS1YLR003C BAT1P38891 393 aaKnown RBP2.06□□□□□ -2.08
CMS1YLR003C ATG18P43601 500 aa2.06□□□□□ -2.08
CMS1YLR003C NDL1Q06568 189 aa2.06□□□□□ -2.08
CMS1YLR003C IPK1Q06667 281 aa2.06□□□□□ -2.08
CMS1YLR003C PEX27Q08580 376 aa2.06□□□□□ -2.08
CMS1YLR003C TFB5Q3E7C1 72 aaPredicted RBP2.06□□□□□ -2.08
CMS1YLR003C RPB5P20434 215 aa2.05□□□□□ -2.08
CMS1YLR003C SEC27P41811 889 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms