RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	ARR1	Q06596	294 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	DCI1	Q08558	271 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	SUP35	P05453	685 aa	Known RBP	2.68	□□□□□ -1.98
VHR1	YIL056W	TAL1	P15019	335 aa	Known RBP	2.68	□□□□□ -1.98
VHR1	YIL056W	RME1	P32338	300 aa	Known RBP	2.68	□□□□□ -1.98
VHR1	YIL056W	SOR1	P35497	357 aa	Known RBP	2.68	□□□□□ -1.98
VHR1	YIL056W	LIN1	P38852	340 aa	Predicted RBP	2.68	□□□□□ -1.98
VHR1	YIL056W	FAA2	P39518	744 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	RHO5	P53879	331 aa	Known RBP	2.68	□□□□□ -1.98
VHR1	YIL056W	AQR1	P53943	586 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	RSN1	Q03516	953 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	VPS20	Q04272	221 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	DCS1	Q06151	350 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	YLR413W	Q06689	675 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	SOR2	Q07786	357 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	UAF30	Q08747	228 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	BUG1	Q12191	341 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	RBD2	Q12270	262 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	ORT1	Q12375	292 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	TFB5	Q3E7C1	72 aa	Predicted RBP	2.68	□□□□□ -1.98
VHR1	YIL056W	NAM2	P11325	894 aa		2.67	□□□□□ -1.98
VHR1	YIL056W	GCD2	P12754	651 aa	Predicted RBP	2.67	□□□□□ -1.98
VHR1	YIL056W	UNG1	P12887	359 aa		2.67	□□□□□ -1.98
VHR1	YIL056W	HSP104	P31539	908 aa	Known RBP	2.67	□□□□□ -1.98
VHR1	YIL056W	MSN4	P33749	630 aa		2.67	□□□□□ -1.98
VHR1	YIL056W	TPO5	P36029	618 aa		2.67	□□□□□ -1.98
VHR1	YIL056W	RRN10	P38204	145 aa		2.67	□□□□□ -1.98
VHR1	YIL056W	GDT1	P38301	280 aa	Predicted RBP	2.67	□□□□□ -1.98
VHR1	YIL056W	PCF11	P39081	626 aa	Predicted RBP	2.67	□□□□□ -1.98
VHR1	YIL056W	AIM20	P40451	204 aa		2.67	□□□□□ -1.98
VHR1	YIL056W	LOC1	P43586	204 aa	Predicted RBP	2.67	□□□□□ -1.98
VHR1	YIL056W	CWC25	P53854	179 aa	Known RBP	2.67	□□□□□ -1.98
VHR1	YIL056W	HXT11	P54862	567 aa		2.67	□□□□□ -1.98
VHR1	YIL056W	BOP2	Q06150	570 aa		2.67	□□□□□ -1.98
VHR1	YIL056W	ERV2	Q12284	196 aa		2.67	□□□□□ -1.98
VHR1	YIL056W	MRPL23	Q12487	163 aa	Predicted RBP	2.67	□□□□□ -1.98
VHR1	YIL056W	CBP2	P03874	630 aa	Predicted RBP	2.66	□□□□□ -1.98
VHR1	YIL056W	CAR2	P07991	424 aa	Known RBP	2.66	□□□□□ -1.98
VHR1	YIL056W	PRB1	P09232	635 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	SPO12	P17123	173 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	RFS1	P38234	210 aa	Known RBP	2.66	□□□□□ -1.98
VHR1	YIL056W	SLM4	P38247	162 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	EFM3	P47163	339 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	TRF5	P48561	642 aa	Known RBP	2.66	□□□□□ -1.98
VHR1	YIL056W	AZR1	P50080	613 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	EFM5	P53200	248 aa	Known RBP	2.66	□□□□□ -1.98
VHR1	YIL056W	YNL143C	P53908	130 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	LDB17	Q12342	491 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	NBL1	Q3E7Y6	73 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	TRP1	P00912	224 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	CDC42	P19073	191 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	COT1	P32798	439 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	MRPL4	P36517	319 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	MSG5	P38590	489 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	MNN9	P39107	395 aa	Known RBP	2.66	□□□□□ -1.98
VHR1	YIL056W	SSO2	P39926	295 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	MPP6	P53725	186 aa	Predicted RBP	2.66	□□□□□ -1.98
VHR1	YIL056W	YNL247W	P53852	767 aa	Known RBP	2.66	□□□□□ -1.98
VHR1	YIL056W	NDE2	Q07500	545 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	RRG7	Q08774	242 aa	Predicted RBP	2.66	□□□□□ -1.98
VHR1	YIL056W	MED2	Q12124	431 aa		2.66	□□□□□ -1.98
VHR1	YIL056W	ARG80	P07249	177 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	CLN3	P13365	580 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	SEC63	P14906	663 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	RVS161	P25343	265 aa	Known RBP	2.65	□□□□□ -1.99
VHR1	YIL056W	LDB16	P25587	256 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	ITR1	P30605	584 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	MGM101	P32787	269 aa	Known RBP	2.65	□□□□□ -1.99
VHR1	YIL056W	ECM4	P36156	370 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	ATP3	P38077	311 aa	Known RBP	2.65	□□□□□ -1.99
VHR1	YIL056W	SLX1	P38324	304 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	MLH1	P38920	769 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	YFR018C	P43599	363 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	SDT1	P53078	280 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	CGR1	P53188	120 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	RRP46	P53256	223 aa	Predicted RBP	2.65	□□□□□ -1.99
VHR1	YIL056W	MNT4	P53745	580 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	ADD37	Q03233	198 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	RPN9	Q04062	393 aa	Known RBP	2.65	□□□□□ -1.99
VHR1	YIL056W	CSI1	Q04368	295 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	YLR297W	Q05899	129 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	ECM7	Q06200	448 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	CUR1	Q06469	252 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	DIB1	Q06819	143 aa	Predicted RBP	2.65	□□□□□ -1.99
VHR1	YIL056W	SKI7	Q08491	747 aa	Predicted RBP	2.65	□□□□□ -1.99
VHR1	YIL056W	TMS1	Q12116	473 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	YDR061W	Q12298	539 aa		2.65	□□□□□ -1.99
VHR1	YIL056W	IKI3	Q06706	1349 aa	Known RBP	2.64	□□□□□ -1.99
VHR1	YIL056W	VPS63	O13549	108 aa		2.64	□□□□□ -1.99
VHR1	YIL056W	SCEI	P03882	235 aa		2.64	□□□□□ -1.99
VHR1	YIL056W	KSS1	P14681	368 aa		2.64	□□□□□ -1.99
VHR1	YIL056W	MSS116	P15424	664 aa	Known RBP	2.64	□□□□□ -1.99
VHR1	YIL056W	UBA1	P22515	1024 aa	Known RBP	2.64	□□□□□ -1.99
VHR1	YIL056W	FAA1	P30624	700 aa	Known RBP	2.64	□□□□□ -1.99
VHR1	YIL056W	SRB4	P32569	687 aa		2.64	□□□□□ -1.99
VHR1	YIL056W	BUD2	P33314	1104 aa		2.64	□□□□□ -1.99
VHR1	YIL056W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
VHR1	YIL056W	MRPL10	P36520	322 aa		2.64	□□□□□ -1.99
VHR1	YIL056W	MRPL37	P36532	105 aa		2.64	□□□□□ -1.99
VHR1	YIL056W	RRP4	P38792	359 aa	Known RBP	2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms