RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W GCD14P46959 383 aaPredicted RBP2.35□□□□□ -2.03
SNX41YDR425W COG5P53951 403 aa2.35□□□□□ -2.03
SNX41YDR425W TAF12Q03761 539 aa2.35□□□□□ -2.03
SNX41YDR425W TVP15Q03860 143 aa2.35□□□□□ -2.03
SNX41YDR425W YMR087WQ04299 284 aa2.35□□□□□ -2.03
SNX41YDR425W AIM33Q04516 312 aa2.35□□□□□ -2.03
SNX41YDR425W YDR222WQ04925 415 aa2.35□□□□□ -2.03
SNX41YDR425W PEX10Q05568 337 aa2.35□□□□□ -2.03
SNX41YDR425W ECM30Q06673 1274 aa2.35□□□□□ -2.03
SNX41YDR425W TEN1Q07921 160 aa2.35□□□□□ -2.03
SNX41YDR425W AAD15Q08361 143 aa2.35□□□□□ -2.03
SNX41YDR425W SPE3Q12074 293 aaKnown RBP2.35□□□□□ -2.03
SNX41YDR425W YDL109CQ12103 647 aa2.35□□□□□ -2.03
SNX41YDR425W MED2Q12124 431 aa2.35□□□□□ -2.03
SNX41YDR425W PSY3Q12318 242 aa2.35□□□□□ -2.03
SNX41YDR425W GPM3Q12326 303 aa2.35□□□□□ -2.03
SNX41YDR425W HSP42Q12329 375 aa2.35□□□□□ -2.03
SNX41YDR425W LDB17Q12342 491 aa2.35□□□□□ -2.03
SNX41YDR425W HRT3Q12347 344 aa2.35□□□□□ -2.03
SNX41YDR425W MET17P06106 444 aa2.34□□□□□ -2.03
SNX41YDR425W CDC33P07260 213 aaKnown RBP2.34□□□□□ -2.03
SNX41YDR425W AMD1P15274 810 aaKnown RBP2.34□□□□□ -2.03
SNX41YDR425W CMK2P22517 447 aa2.34□□□□□ -2.03
SNX41YDR425W SGV1P23293 657 aaKnown RBP2.34□□□□□ -2.03
SNX41YDR425W VMA8P32610 256 aaKnown RBP2.34□□□□□ -2.03
SNX41YDR425W SAS3P34218 831 aa2.34□□□□□ -2.03
SNX41YDR425W PTK1P36002 662 aaPredicted RBP2.34□□□□□ -2.03
SNX41YDR425W GRE3P38715 327 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SNX41YDR425W LSM12P38828 187 aaKnown RBP2.34□□□□□ -2.03
SNX41YDR425W CCT6P39079 546 aa2.34□□□□□ -2.03
SNX41YDR425W SER3P40054 469 aa2.34□□□□□ -2.03
SNX41YDR425W PEP8P40335 379 aa2.34□□□□□ -2.03
SNX41YDR425W YGR210CP42942 411 aa2.34□□□□□ -2.03
SNX41YDR425W IKS1P47042 667 aa2.34□□□□□ -2.03
SNX41YDR425W RTT101P47050 842 aa2.34□□□□□ -2.03
SNX41YDR425W BIR1P47134 954 aa2.34□□□□□ -2.03
SNX41YDR425W YML6P51998 286 aa2.34□□□□□ -2.03
SNX41YDR425W GET1P53192 235 aa2.34□□□□□ -2.03
SNX41YDR425W YGR111WP53265 400 aa2.34□□□□□ -2.03
SNX41YDR425W YGR127WP53275 312 aa2.34□□□□□ -2.03
SNX41YDR425W NOP19P53317 196 aaPredicted RBP2.34□□□□□ -2.03
SNX41YDR425W ZRG17P53735 605 aa2.34□□□□□ -2.03
SNX41YDR425W PGA2P53903 129 aa2.34□□□□□ -2.03
SNX41YDR425W YSA1Q01976 231 aa2.34□□□□□ -2.03
SNX41YDR425W YMR099CQ03161 297 aaKnown RBP2.34□□□□□ -2.03
SNX41YDR425W YPR172WQ06608 200 aa2.34□□□□□ -2.03
SNX41YDR425W YLR031WQ07978 186 aa2.34□□□□□ -2.03
SNX41YDR425W SGT1Q08446 395 aa2.34□□□□□ -2.03
SNX41YDR425W RAX1Q08760 435 aa2.34□□□□□ -2.03
SNX41YDR425W VPS54Q12071 889 aa2.34□□□□□ -2.03
SNX41YDR425W NCE102Q12207 173 aaRIP-Chip data2.34□□□□□ -2.03not detected
SNX41YDR425W GRX6Q12438 231 aa2.34□□□□□ -2.03
SNX41YDR425W FMP16Q12497 93 aa2.34□□□□□ -2.03
SNX41YDR425W UTP10P42945 1769 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W STE2D6VTK4 431 aa2.33□□□□□ -2.04
SNX41YDR425W CDC31P06704 161 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W NFT1P0CE68 1218 aa2.33□□□□□ -2.04
SNX41YDR425W RED1P14291 827 aa2.33□□□□□ -2.04
SNX41YDR425W KSS1P14681 368 aa2.33□□□□□ -2.04
SNX41YDR425W CBS2P14905 389 aa2.33□□□□□ -2.04
SNX41YDR425W GRX2P17695 143 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W KGD1P20967 1014 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W SPB1P25582 841 aaPredicted RBP2.33□□□□□ -2.04
SNX41YDR425W POL4P25615 582 aa2.33□□□□□ -2.04
SNX41YDR425W URA7P28274 579 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W VMA6P32366 345 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W SSE2P32590 693 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W IMP3P32899 183 aaPredicted RBP2.33□□□□□ -2.04
SNX41YDR425W YOX1P34161 385 aa2.33□□□□□ -2.04
SNX41YDR425W AUR1P36107 401 aaPredicted RBP2.33□□□□□ -2.04
SNX41YDR425W SLX1P38324 304 aa2.33□□□□□ -2.04
SNX41YDR425W PHO89P38361 574 aa2.33□□□□□ -2.04
SNX41YDR425W YHR218WP38899 603 aa2.33□□□□□ -2.04
SNX41YDR425W GAA1P39012 614 aa2.33□□□□□ -2.04
SNX41YDR425W VMA7P39111 118 aa2.33□□□□□ -2.04
SNX41YDR425W FAA2P39518 744 aa2.33□□□□□ -2.04
SNX41YDR425W KRE29P40026 464 aa2.33□□□□□ -2.04
SNX41YDR425W PHB1P40961 287 aa2.33□□□□□ -2.04
SNX41YDR425W LCB2P40970 561 aa2.33□□□□□ -2.04
SNX41YDR425W YFL040WP43562 540 aa2.33□□□□□ -2.04
SNX41YDR425W EFM3P47163 339 aa2.33□□□□□ -2.04
SNX41YDR425W COS5P47187 383 aa2.33□□□□□ -2.04
SNX41YDR425W CWC23P52868 283 aaPredicted RBP2.33□□□□□ -2.04
SNX41YDR425W ARE2P53629 642 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W DBP6P53734 629 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W BOR1P53838 576 aa2.33□□□□□ -2.04
SNX41YDR425W IPI3P53877 555 aa2.33□□□□□ -2.04
SNX41YDR425W REX2P54964 269 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W YPL014WQ02606 381 aa2.33□□□□□ -2.04
SNX41YDR425W RSN1Q03516 953 aa2.33□□□□□ -2.04
SNX41YDR425W YMR209CQ03648 457 aa2.33□□□□□ -2.04
SNX41YDR425W ARX1Q03862 593 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W DPB4Q04603 196 aaKnown RBP2.33□□□□□ -2.04
SNX41YDR425W DYN3Q04949 312 aa2.33□□□□□ -2.04
SNX41YDR425W BNA5Q05979 453 aa2.33□□□□□ -2.04
SNX41YDR425W APC9Q12107 265 aa2.33□□□□□ -2.04
SNX41YDR425W YDR018CQ12185 396 aa2.33□□□□□ -2.04
SNX41YDR425W GTT2Q12390 233 aa2.33□□□□□ -2.04
SNX41YDR425W DCP1Q12517 231 aaPredicted RBP2.33□□□□□ -2.04
SNX41YDR425W TY4B-HP0C2J7 1802 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms