RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	CFT2	Q12102	859 aa	Predicted RBP	3.22	□□□□□ -1.89
CMD1	YBR109C	NCE102	Q12207	173 aa	RIP-Chip data	3.22	□□□□□ -1.89	not detected
CMD1	YBR109C	RTN2	Q12443	393 aa		3.22	□□□□□ -1.89
CMD1	YBR109C	EFG1	Q3E705	233 aa	Known RBP	3.22	□□□□□ -1.89
CMD1	YBR109C	BRR1	Q99177	341 aa	Predicted RBP	3.22	□□□□□ -1.89
CMD1	YBR109C	HEM2	P05373	342 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	RHO2	P06781	192 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	RAD10	P06838	210 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	VPS3	P23643	1011 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	YCL068C	P25593	260 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	UTR4	P32626	227 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	MRP4	P32902	394 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	ASK1	P35734	292 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	ROT2	P38138	954 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	RFS1	P38234	210 aa	Known RBP	3.21	□□□□□ -1.9
CMD1	YBR109C	PHO89	P38361	574 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	AIM18	P38884	321 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	FAA2	P39518	744 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	PRM9	P39551	298 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	PCL6	P40038	420 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	AIM20	P40451	204 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	MAM33	P40513	266 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	YIR016W	P40572	265 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	FMP32	P43557	207 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	EAF6	P47128	113 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	ALT2	P52892	507 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	YNL234W	P53857	426 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	OSH6	Q02201	448 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	NUP100	Q02629	959 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	EKI1	Q03764	534 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	YDR239C	Q03780	787 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	SPC19	Q03954	165 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	DYN3	Q04949	312 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	CDC123	Q05791	360 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	GRX8	Q05926	109 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	SEC10	Q06245	871 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	NSE1	Q07913	336 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	YOL019W	Q08157	551 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	UAF30	Q08747	228 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	RDR1	Q08904	546 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	ATG29	Q12092	213 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	TY3A-G	Q12173	290 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
CMD1	YBR109C	EMP46	Q12396	444 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	TY3A-I	Q99219	290 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	SAS5	Q99314	248 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	IZH4	Q99393	312 aa		3.21	□□□□□ -1.9
CMD1	YBR109C	PEP4	P07267	405 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	BCY1	P07278	416 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	FUR1	P18562	216 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	AEP1	P32493	518 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	RPN2	P32565	945 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	RPT5	P33297	434 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	NUF2	P33895	451 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	SIP2	P34164	415 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	YPK3	P38070	525 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	MUM2	P38236	366 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	SLM4	P38247	162 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	YHR182W	P38870	785 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	STN1	P38960	494 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	PCF11	P39081	626 aa	Predicted RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	MKT1	P40850	830 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	MSS2	P40990	351 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	AIM22	P47051	409 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	TOM22	P49334	152 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	MNP1	P53163	194 aa	Predicted RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	GET1	P53192	235 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	TWF1	P53250	332 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	YGR126W	P53274	230 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	YGR250C	P53316	781 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	NOP19	P53317	196 aa	Predicted RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	SCW4	P53334	386 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	YNL181W	P53878	407 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	YNL095C	P53932	642 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	ALG11	P53954	548 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	SLM2	P53955	656 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	YNL010W	P53981	241 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	PRO2	P54885	456 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	CIK1	Q01649	594 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	YKR005C	Q02203	525 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	YVH1	Q02256	364 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	ENT5	Q03769	411 aa	Known RBP	3.2	□□□□□ -1.9
CMD1	YBR109C	HSP31	Q04432	237 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	YDR278C	Q05612	105 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	GEP3	Q08622	556 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	LDB17	Q12342	491 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	ERP3	Q12403	225 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	YOL159C-A	Q3E769	90 aa		3.2	□□□□□ -1.9
CMD1	YBR109C	THP2	O13539	261 aa	Known RBP	3.19	□□□□□ -1.9
CMD1	YBR109C	TEF1	P02994	458 aa	Known RBP	3.19	□□□□□ -1.9
CMD1	YBR109C	RPL6B	P05739	176 aa	Known RBP	3.19	□□□□□ -1.9
CMD1	YBR109C	SGV1	P23293	657 aa	Known RBP	3.19	□□□□□ -1.9
CMD1	YBR109C	AAT2	P23542	418 aa	Known RBP	3.19	□□□□□ -1.9
CMD1	YBR109C	RVS161	P25343	265 aa	Known RBP	3.19	□□□□□ -1.9
CMD1	YBR109C	RPS2	P25443	254 aa	Known RBP	3.19	□□□□□ -1.9
CMD1	YBR109C	GID7	P25569	745 aa		3.19	□□□□□ -1.9
CMD1	YBR109C	YCR090C	P25654	182 aa	Known RBP	3.19	□□□□□ -1.9
CMD1	YBR109C	VMA6	P32366	345 aa	Known RBP	3.19	□□□□□ -1.9
CMD1	YBR109C	KAR9	P32526	644 aa		3.19	□□□□□ -1.9
CMD1	YBR109C	COX13	P32799	129 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms