RNA–Protein interactions for RNA: YBL075C

SSA3, Transcript of ATPase involved in protein folding and the response to stress, yeast

Gene SSA3, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA3	YBL075C	SLM1	P40485	686 aa		13.68	□□□□□ -0.22
SSA3	YBL075C	MTR3	P48240	250 aa	Predicted RBP	13.68	□□□□□ -0.22
SSA3	YBL075C	PRM8	P53174	237 aa		13.68	□□□□□ -0.22
SSA3	YBL075C	UAF30	Q08747	228 aa		13.68	□□□□□ -0.22
SSA3	YBL075C	RKM5	Q12367	367 aa		13.68	□□□□□ -0.22
SSA3	YBL075C	PUP1	P25043	261 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	PMI40	P29952	429 aa	Known RBP	13.67	□□□□□ -0.22
SSA3	YBL075C	MSN2	P33748	704 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	YHR054C	P38780	354 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	YIL024C	P40543	189 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	ATG18	P43601	500 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	RET2	P43621	546 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	RCR2	Q03446	210 aa	Known RBP	13.67	□□□□□ -0.22
SSA3	YBL075C	THI73	Q07904	523 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	MDY2	Q12285	212 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	GLO4	Q12320	285 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	IZH4	Q99393	312 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	YLR422W	Q06409	1932 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	HIS5	P07172	385 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	MIS1	P09440	975 aa	Known RBP	13.67	□□□□□ -0.22
SSA3	YBL075C	HNM1	P19807	563 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	MRPL7	P36519	292 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	APL3	P38065	1025 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	ISC1	P40015	477 aa	Known RBP	13.67	□□□□□ -0.22
SSA3	YBL075C	LSM4	P40070	187 aa	Known RBP	13.67	□□□□□ -0.22
SSA3	YBL075C	PGD1	P40356	397 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	SNN1	P48232	102 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	RRT8	Q08219	342 aa		13.67	□□□□□ -0.22
SSA3	YBL075C	PAA1	Q12447	191 aa	Known RBP	13.67	□□□□□ -0.22
SSA3	YBL075C	HO	P09932	586 aa		13.66	□□□□□ -0.22
SSA3	YBL075C	YCR101C	P25607	182 aa		13.66	□□□□□ -0.22
SSA3	YBL075C	DHR2	P36009	735 aa	Predicted RBP	13.66	□□□□□ -0.22
SSA3	YBL075C	SNU114	P36048	1008 aa	Known RBP	13.66	□□□□□ -0.22
SSA3	YBL075C	RCK1	P38622	512 aa		13.66	□□□□□ -0.22
SSA3	YBL075C	RGI1	P40043	161 aa	Predicted RBP	13.66	□□□□□ -0.22
SSA3	YBL075C	MEP1	P40260	492 aa		13.66	□□□□□ -0.22
SSA3	YBL075C	IMO32	P53219	342 aa		13.66	□□□□□ -0.22
SSA3	YBL075C	MRPL22	P53881	309 aa		13.66	□□□□□ -0.22
SSA3	YBL075C	RPN4	Q03465	531 aa		13.66	□□□□□ -0.22
SSA3	YBL075C	PLM2	Q04383	521 aa		13.66	□□□□□ -0.22
SSA3	YBL075C	GAS2	Q06135	555 aa		13.66	□□□□□ -0.22
SSA3	YBL075C	PUS9	Q12069	462 aa		13.66	□□□□□ -0.22
SSA3	YBL075C	GCD1	P09032	578 aa	Predicted RBP	13.65	□□□□□ -0.22
SSA3	YBL075C	SIR1	P21691	654 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	MAG1	P22134	296 aa	Known RBP	13.65	□□□□□ -0.22
SSA3	YBL075C	IFM1	P25038	676 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	ECM25	P32525	599 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	ERV46	P39727	415 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	RSP5	P39940	809 aa	Known RBP	13.65	□□□□□ -0.22
SSA3	YBL075C	GLR1	P41921	483 aa	Known RBP	13.65	□□□□□ -0.22
SSA3	YBL075C	RRN9	P53437	365 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	YNR062C	P53748	327 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	ESC8	Q08119	714 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	THP1	Q08231	455 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	DIN7	Q12086	430 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	LHP1	P33399	275 aa	Known RBP	13.65	□□□□□ -0.22
SSA3	YBL075C	MAC1	P35192	417 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	CAF4	P36130	643 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	MRPL36	P36531	177 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	YBR238C	P38330	731 aa	Known RBP	13.65	□□□□□ -0.22
SSA3	YBL075C	NEM1	P38757	446 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	SPO73	P40031	143 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	OPT1	P40897	799 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	SPO74	P45819	413 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	SEH1	P53011	349 aa	Known RBP	13.65	□□□□□ -0.22
SSA3	YBL075C	YDL199C	Q12407	687 aa		13.65	□□□□□ -0.22
SSA3	YBL075C	ERG20	P08524	352 aa	Known RBP	13.64	□□□□□ -0.23
SSA3	YBL075C	UTR1	P21373	530 aa		13.64	□□□□□ -0.23
SSA3	YBL075C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	13.64	□□□□□ -0.23	not detected
SSA3	YBL075C	IDS2	P46958	469 aa		13.64	□□□□□ -0.23
SSA3	YBL075C	YAE1	P47118	141 aa	Predicted RBP	13.64	□□□□□ -0.23
SSA3	YBL075C	RRN5	Q02983	363 aa		13.64	□□□□□ -0.23
SSA3	YBL075C	NRT1	Q08485	598 aa		13.64	□□□□□ -0.23
SSA3	YBL075C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	13.64	□□□□□ -0.23	not detected
SSA3	YBL075C	GUP2	Q08929	609 aa		13.64	□□□□□ -0.23
SSA3	YBL075C	RPS9A	O13516	197 aa	Known RBP	13.63	□□□□□ -0.23
SSA3	YBL075C	CDC4	P07834	779 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	BEM1	P29366	551 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	TUL1	P36096	758 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	PRS3	P38689	320 aa	Known RBP	13.63	□□□□□ -0.23
SSA3	YBL075C	SWM2	P40342	146 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	UTP25	P40498	721 aa	Known RBP	13.63	□□□□□ -0.23
SSA3	YBL075C	FAF1	P40546	346 aa	Predicted RBP	13.63	□□□□□ -0.23
SSA3	YBL075C	STR3	P53101	465 aa	Known RBP	13.63	□□□□□ -0.23
SSA3	YBL075C	GND2	P53319	492 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	ERV29	P53337	310 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	YDR109C	Q04585	715 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	YHC1	Q05900	231 aa	Known RBP	13.63	□□□□□ -0.23
SSA3	YBL075C	UTP21	Q06078	939 aa	Predicted RBP	13.63	□□□□□ -0.23
SSA3	YBL075C	RRP40	Q08285	240 aa	Known RBP	13.63	□□□□□ -0.23
SSA3	YBL075C	JLP1	Q12358	412 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	KRR1	P25586	316 aa	Predicted RBP	13.63	□□□□□ -0.23
SSA3	YBL075C	GDS1	P41913	522 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	PSA1	P41940	361 aa	Known RBP	13.63	□□□□□ -0.23
SSA3	YBL075C	MCM22	P47167	239 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	YGR035C	P53222	116 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	ODC1	Q03028	310 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	RKM2	Q03942	479 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	CYK3	Q07533	885 aa		13.63	□□□□□ -0.23
SSA3	YBL075C	YLR049C	Q12110	428 aa		13.63	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms