RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W SVL3Q03088 825 aaKnown RBP0.94□□□□□ -2.26
SGF11YPL047W PRM6Q04705 352 aa0.94□□□□□ -2.26
SGF11YPL047W RRP45Q05636 305 aaKnown RBP0.94□□□□□ -2.26
SGF11YPL047W MFG1Q07684 458 aa0.94□□□□□ -2.26
SGF11YPL047W SOR2Q07786 357 aa0.94□□□□□ -2.26
SGF11YPL047W VAM3Q12241 283 aa0.94□□□□□ -2.26
SGF11YPL047W APC2Q12440 853 aa0.94□□□□□ -2.26
SGF11YPL047W NAG1Q8TGN9 163 aa0.94□□□□□ -2.26
SGF11YPL047W PIS1P06197 220 aaKnown RBP0.93□□□□□ -2.26
SGF11YPL047W STE7P06784 515 aa0.93□□□□□ -2.26
SGF11YPL047W BEM1P29366 551 aa0.93□□□□□ -2.26
SGF11YPL047W FUN26P31381 517 aa0.93□□□□□ -2.26
SGF11YPL047W DPH5P32469 300 aaPredicted RBP0.93□□□□□ -2.26
SGF11YPL047W TFB1P32776 642 aa0.93□□□□□ -2.26
SGF11YPL047W PTK1P36002 662 aaPredicted RBP0.93□□□□□ -2.26
SGF11YPL047W SPO73P40031 143 aa0.93□□□□□ -2.26
SGF11YPL047W IGD1P43598 195 aa0.93□□□□□ -2.26
SGF11YPL047W AIP1P46680 615 aaKnown RBP0.93□□□□□ -2.26
SGF11YPL047W TOM22P49334 152 aa0.93□□□□□ -2.26
SGF11YPL047W YGR067CP53243 804 aa0.93□□□□□ -2.26
SGF11YPL047W SKO1Q02100 647 aa0.93□□□□□ -2.26
SGF11YPL047W TDA1Q03533 586 aa0.93□□□□□ -2.26
SGF11YPL047W CCE1Q03702 353 aa0.93□□□□□ -2.26
SGF11YPL047W SNT309Q06091 175 aaPredicted RBP0.93□□□□□ -2.26
SGF11YPL047W SLF1Q12034 447 aaKnown RBP0.93□□□□□ -2.26
SGF11YPL047W RUP1Q12242 671 aa0.93□□□□□ -2.26
SGF11YPL047W EAF3Q12432 401 aa0.93□□□□□ -2.26
SGF11YPL047W SAL1D6W196 494 aa0.92□□□□□ -2.26
SGF11YPL047W ADE4P04046 510 aaKnown RBP0.92□□□□□ -2.26
SGF11YPL047W PAB1P04147 577 aaKnown RBP RIP-Chip data0.92□□□□□ -2.26 RIP-Chip
SGF11YPL047W EXG1P23776 448 aaKnown RBP0.92□□□□□ -2.26
SGF11YPL047W ROX1P25042 368 aa0.92□□□□□ -2.26
SGF11YPL047W COX13P32799 129 aa0.92□□□□□ -2.26
SGF11YPL047W YME2P32843 850 aa0.92□□□□□ -2.26
SGF11YPL047W RRN10P38204 145 aa0.92□□□□□ -2.26
SGF11YPL047W NTC20P38302 140 aaPredicted RBP0.92□□□□□ -2.26
SGF11YPL047W LSM12P38828 187 aaKnown RBP0.92□□□□□ -2.26
SGF11YPL047W WSS1P38838 269 aa0.92□□□□□ -2.26
SGF11YPL047W FRT2P39734 528 aa0.92□□□□□ -2.26
SGF11YPL047W YNL208WP40159 199 aaKnown RBP0.92□□□□□ -2.26
SGF11YPL047W LCB3P47013 409 aa0.92□□□□□ -2.26
SGF11YPL047W PHB2P50085 310 aa0.92□□□□□ -2.26
SGF11YPL047W MNP1P53163 194 aaPredicted RBP0.92□□□□□ -2.26
SGF11YPL047W YGR250CP53316 781 aaKnown RBP0.92□□□□□ -2.26
SGF11YPL047W ALF1P53904 254 aa0.92□□□□□ -2.26
SGF11YPL047W MMT1Q03218 510 aa0.92□□□□□ -2.26
SGF11YPL047W RPN9Q04062 393 aaKnown RBP0.92□□□□□ -2.26
SGF11YPL047W COG4Q06096 861 aa0.92□□□□□ -2.26
SGF11YPL047W YPR195CQ06594 109 aa0.92□□□□□ -2.26
SGF11YPL047W SIL1Q08199 421 aa0.92□□□□□ -2.26
SGF11YPL047W MED1Q12321 566 aa0.92□□□□□ -2.26
SGF11YPL047W MRP7P12687 371 aa0.91□□□□□ -2.26
SGF11YPL047W CAP2P13517 287 aa0.91□□□□□ -2.26
SGF11YPL047W RPL3P14126 387 aaKnown RBP0.91□□□□□ -2.26
SGF11YPL047W CKA1P15790 372 aa0.91□□□□□ -2.26
SGF11YPL047W GFD2P25370 566 aaKnown RBP0.91□□□□□ -2.26
SGF11YPL047W RAD5P32849 1169 aaPredicted RBP0.91□□□□□ -2.26
SGF11YPL047W PRY2P36110 329 aa0.91□□□□□ -2.26
SGF11YPL047W ATP3P38077 311 aaKnown RBP0.91□□□□□ -2.26
SGF11YPL047W MMS4P38257 691 aa0.91□□□□□ -2.26
SGF11YPL047W TOS3P43637 560 aa0.91□□□□□ -2.26
SGF11YPL047W CPR7P47103 393 aa0.91□□□□□ -2.26
SGF11YPL047W YGL138CP53122 345 aa0.91□□□□□ -2.26
SGF11YPL047W RPN14P53196 417 aa0.91□□□□□ -2.26
SGF11YPL047W TIM10P87108 93 aa0.91□□□□□ -2.26
SGF11YPL047W RPL21AQ02753 160 aaKnown RBP0.91□□□□□ -2.26
SGF11YPL047W HOT1Q03213 719 aa0.91□□□□□ -2.26
SGF11YPL047W MED2Q12124 431 aa0.91□□□□□ -2.26
SGF11YPL047W RRI2Q12348 645 aa0.91□□□□□ -2.26
SGF11YPL047W HIF1Q12373 385 aa0.91□□□□□ -2.26
SGF11YPL047W RPL21BQ12672 160 aaKnown RBP0.91□□□□□ -2.26
SGF11YPL047W RPS19AP07280 144 aaKnown RBP0.9□□□□□ -2.27
SGF11YPL047W RPS19BP07281 144 aaPredicted RBP0.9□□□□□ -2.27
SGF11YPL047W IMA3P0CW40 589 aa0.9□□□□□ -2.27
SGF11YPL047W IMA4P0CW41 589 aa0.9□□□□□ -2.27
SGF11YPL047W PUT4P15380 627 aa0.9□□□□□ -2.27
SGF11YPL047W GIT1P25346 518 aa0.9□□□□□ -2.27
SGF11YPL047W AGA2P32781 87 aa0.9□□□□□ -2.27
SGF11YPL047W YBR056WP38081 501 aa0.9□□□□□ -2.27
SGF11YPL047W STP2P38704 541 aa0.9□□□□□ -2.27
SGF11YPL047W PEX22P39718 180 aa0.9□□□□□ -2.27
SGF11YPL047W KEG1P43614 200 aa0.9□□□□□ -2.27
SGF11YPL047W RPT4P53549 437 aaKnown RBP0.9□□□□□ -2.27
SGF11YPL047W STD1Q02794 444 aa0.9□□□□□ -2.27
SGF11YPL047W KAP120Q02932 1032 aa0.9□□□□□ -2.27
SGF11YPL047W PRP42Q03776 544 aaKnown RBP0.9□□□□□ -2.27
SGF11YPL047W DON1Q05610 365 aa0.9□□□□□ -2.27
SGF11YPL047W YLR345WQ06137 509 aa0.9□□□□□ -2.27
SGF11YPL047W IMA2Q08295 589 aa0.9□□□□□ -2.27
SGF11YPL047W YDR061WQ12298 539 aa0.9□□□□□ -2.27
SGF11YPL047W NCA2Q12374 616 aa0.9□□□□□ -2.27
SGF11YPL047W YOL085CQ99345 113 aa0.9□□□□□ -2.27
SGF11YPL047W TY1B-AO13527 1196 aaKnown RBP0.89□□□□□ -2.27
SGF11YPL047W COX3P00420 269 aa0.89□□□□□ -2.27
SGF11YPL047W HOM3P10869 527 aa0.89□□□□□ -2.27
SGF11YPL047W CLB3P24870 427 aa0.89□□□□□ -2.27
SGF11YPL047W ERG3P32353 365 aa0.89□□□□□ -2.27
SGF11YPL047W SHE3P38272 425 aaKnown RBP0.89□□□□□ -2.27
SGF11YPL047W PFS1P38872 237 aa0.89□□□□□ -2.27
SGF11YPL047W GAT2P40209 560 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms