RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C MCH1Q07376 486 aa1.94□□□□□ -2.1
SWT1YOR166C RKM1Q08961 583 aaPredicted RBP1.94□□□□□ -2.1
SWT1YOR166C CHS1P08004 1131 aa1.93□□□□□ -2.1
SWT1YOR166C ARF1P11076 181 aaKnown RBP1.93□□□□□ -2.1
SWT1YOR166C CTR86P25355 563 aa1.93□□□□□ -2.1
SWT1YOR166C SWD3P38123 315 aa1.93□□□□□ -2.1
SWT1YOR166C ECM8P38246 354 aa1.93□□□□□ -2.1
SWT1YOR166C YAL037WP39728 267 aa1.93□□□□□ -2.1
SWT1YOR166C VHS2P40463 436 aa1.93□□□□□ -2.1
SWT1YOR166C REE1P40893 198 aa1.93□□□□□ -2.1
SWT1YOR166C PAC11P40960 533 aa1.93□□□□□ -2.1
SWT1YOR166C TOS3P43637 560 aa1.93□□□□□ -2.1
SWT1YOR166C BIR1P47134 954 aa1.93□□□□□ -2.1
SWT1YOR166C YML6P51998 286 aa1.93□□□□□ -2.1
SWT1YOR166C CLD1P53264 445 aa1.93□□□□□ -2.1
SWT1YOR166C YMR102CQ03177 834 aa1.93□□□□□ -2.1
SWT1YOR166C PRP42Q03776 544 aaKnown RBP1.93□□□□□ -2.1
SWT1YOR166C MMR1Q06324 491 aa1.93□□□□□ -2.1
SWT1YOR166C RAX1Q08760 435 aa1.93□□□□□ -2.1
SWT1YOR166C TMS1Q12116 473 aa1.93□□□□□ -2.1
SWT1YOR166C ADE4P04046 510 aaKnown RBP1.92□□□□□ -2.1
SWT1YOR166C TPK3P05986 398 aa1.92□□□□□ -2.1
SWT1YOR166C AAT2P23542 418 aaKnown RBP1.92□□□□□ -2.1
SWT1YOR166C MNE1P24720 663 aa1.92□□□□□ -2.1
SWT1YOR166C ERV1P27882 189 aa1.92□□□□□ -2.1
SWT1YOR166C IES6P32617 166 aa1.92□□□□□ -2.1
SWT1YOR166C ASC1P38011 319 aaKnown RBP1.92□□□□□ -2.1
SWT1YOR166C INM1P38710 295 aa1.92□□□□□ -2.1
SWT1YOR166C FAD1P38913 306 aa1.92□□□□□ -2.1
SWT1YOR166C GAT2P40209 560 aa1.92□□□□□ -2.1
SWT1YOR166C YMR147WP40218 223 aaKnown RBP1.92□□□□□ -2.1
SWT1YOR166C MRM2P53123 320 aa1.92□□□□□ -2.1
SWT1YOR166C HXT11P54862 567 aa1.92□□□□□ -2.1
SWT1YOR166C YPL107WQ02873 248 aa1.92□□□□□ -2.1
SWT1YOR166C YDR541CQ03049 344 aa1.92□□□□□ -2.1
SWT1YOR166C YDR131CQ03899 556 aa1.92□□□□□ -2.1
SWT1YOR166C RIF2Q06208 395 aa1.92□□□□□ -2.1
SWT1YOR166C ERV2Q12284 196 aa1.92□□□□□ -2.1
SWT1YOR166C PCL9Q12477 304 aa1.92□□□□□ -2.1
SWT1YOR166C SRN2Q99176 213 aa1.92□□□□□ -2.1
SWT1YOR166C MDL1P33310 695 aa1.91□□□□□ -2.1
SWT1YOR166C SKN1P33336 771 aa1.91□□□□□ -2.1
SWT1YOR166C SPT10P35208 640 aa1.91□□□□□ -2.1
SWT1YOR166C HAL1Q01766 294 aa1.91□□□□□ -2.1
SWT1YOR166C RCF1Q03713 159 aa1.91□□□□□ -2.1
SWT1YOR166C RPN9Q04062 393 aaKnown RBP1.91□□□□□ -2.1
SWT1YOR166C CMS1Q07897 291 aaKnown RBP1.91□□□□□ -2.1
SWT1YOR166C NSE1Q07913 336 aa1.91□□□□□ -2.1
SWT1YOR166C AAD15Q08361 143 aa1.91□□□□□ -2.1
SWT1YOR166C SRL2Q12020 392 aa1.91□□□□□ -2.1
SWT1YOR166C GLE1Q12315 538 aa1.91□□□□□ -2.1
SWT1YOR166C GPM3Q12326 303 aa1.91□□□□□ -2.1
SWT1YOR166C HRT3Q12347 344 aa1.91□□□□□ -2.1
SWT1YOR166C ERP4Q12450 207 aa1.91□□□□□ -2.1
SWT1YOR166C MEX67Q99257 599 aaKnown RBP1.91□□□□□ -2.1
SWT1YOR166C POM152P39685 1337 aa1.91□□□□□ -2.1
SWT1YOR166C ASP3-2P0CX77 362 aa1.9□□□□□ -2.11
SWT1YOR166C ASP3-3P0CX78 362 aa1.9□□□□□ -2.11
SWT1YOR166C ASP3-4P0CX79 362 aa1.9□□□□□ -2.11
SWT1YOR166C ASP3-1P0CZ17 362 aa1.9□□□□□ -2.11
SWT1YOR166C CLN3P13365 580 aa1.9□□□□□ -2.11
SWT1YOR166C RPB5P20434 215 aa1.9□□□□□ -2.11
SWT1YOR166C MRPL8P22353 238 aa1.9□□□□□ -2.11
SWT1YOR166C URA7P28274 579 aaKnown RBP1.9□□□□□ -2.11
SWT1YOR166C NRP1P32770 719 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
SWT1YOR166C MID2P36027 376 aa1.9□□□□□ -2.11
SWT1YOR166C RTC2P38279 296 aa1.9□□□□□ -2.11
SWT1YOR166C KEL1P38853 1164 aaKnown RBP1.9□□□□□ -2.11
SWT1YOR166C AIM10P39965 576 aaKnown RBP1.9□□□□□ -2.11
SWT1YOR166C JLP2P40206 208 aa1.9□□□□□ -2.11
SWT1YOR166C VMA13P41807 478 aaKnown RBP1.9□□□□□ -2.11
SWT1YOR166C EPL1P43572 832 aa1.9□□□□□ -2.11
SWT1YOR166C LCB3P47013 409 aa1.9□□□□□ -2.11
SWT1YOR166C ROG1P53118 685 aa1.9□□□□□ -2.11
SWT1YOR166C MPS2P53159 387 aa1.9□□□□□ -2.11
SWT1YOR166C YGR117CP53270 476 aa1.9□□□□□ -2.11
SWT1YOR166C URH1Q04179 340 aa1.9□□□□□ -2.11
SWT1YOR166C MDM36Q06820 579 aa1.9□□□□□ -2.11
SWT1YOR166C YGK3Q12222 375 aaPredicted RBP1.9□□□□□ -2.11
SWT1YOR166C AHC1Q12433 566 aa1.9□□□□□ -2.11
SWT1YOR166C IZH2Q12442 317 aa1.9□□□□□ -2.11
SWT1YOR166C RMD5Q12508 421 aa1.9□□□□□ -2.11
SWT1YOR166C FOL3Q12676 427 aaPredicted RBP1.9□□□□□ -2.11
SWT1YOR166C PGA3Q12746 312 aaKnown RBP1.9□□□□□ -2.11
SWT1YOR166C NFT1P0CE68 1218 aa1.89□□□□□ -2.11
SWT1YOR166C MSI1P13712 422 aa1.89□□□□□ -2.11
SWT1YOR166C ALG1P16661 449 aa1.89□□□□□ -2.11
SWT1YOR166C PSK1P31374 1356 aa1.89□□□□□ -2.11
SWT1YOR166C YEF1P32622 495 aa1.89□□□□□ -2.11
SWT1YOR166C HEL1P36113 551 aa1.89□□□□□ -2.11
SWT1YOR166C RFC3P38629 340 aa1.89□□□□□ -2.11
SWT1YOR166C JEM1P40358 645 aa1.89□□□□□ -2.11
SWT1YOR166C SIM1P40472 476 aa1.89□□□□□ -2.11
SWT1YOR166C SNL1P40548 159 aa1.89□□□□□ -2.11
SWT1YOR166C EOS1P53938 366 aa1.89□□□□□ -2.11
SWT1YOR166C MDM30Q05930 598 aa1.89□□□□□ -2.11
SWT1YOR166C CUE5Q08412 411 aaKnown RBP1.89□□□□□ -2.11
SWT1YOR166C SPE3Q12074 293 aaKnown RBP1.89□□□□□ -2.11
SWT1YOR166C LDB17Q12342 491 aa1.89□□□□□ -2.11
SWT1YOR166C YOP1Q12402 180 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms